RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	KDR	P35968	1356 aa		29.03	■■■□□ 2.24
NECAB3-222	ENST00000607805	IGSF1	Q8N6C5	1336 aa		29.03	■■■□□ 2.24
NECAB3-222	ENST00000607805	ADCY9	O60503	1353 aa		29.02	■■■□□ 2.24
NECAB3-222	ENST00000607805	ATP10D	Q9P241	1426 aa		29.02	■■■□□ 2.24
NECAB3-222	ENST00000607805	ATP6V1A	P38606	617 aa		29.01	■■■□□ 2.23
NECAB3-222	ENST00000607805	TNNT2	P45379	298 aa	Predicted RBP	29	■■■□□ 2.23
NECAB3-222	ENST00000607805	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.99	■■■□□ 2.23
NECAB3-222	ENST00000607805	SLC4A9	Q96Q91	983 aa		28.99	■■■□□ 2.23
NECAB3-222	ENST00000607805	GNPAT	O15228	680 aa		28.98	■■■□□ 2.23
NECAB3-222	ENST00000607805	BRCA1	P38398	1863 aa	Known RBP	28.97	■■■□□ 2.23
NECAB3-222	ENST00000607805	ERVV-2	B6SEH9	535 aa		28.97	■■■□□ 2.23
NECAB3-222	ENST00000607805	CIC	Q96RK0	1608 aa	Predicted RBP	28.97	■■■□□ 2.23
NECAB3-222	ENST00000607805	C4A	P0C0L4	1744 aa		28.97	■■■□□ 2.23
NECAB3-222	ENST00000607805	VIRMA	Q69YN4	1812 aa	Known RBP	28.96	■■■□□ 2.23
NECAB3-222	ENST00000607805	KDM6A	O15550	1401 aa	Predicted RBP	28.95	■■■□□ 2.23
NECAB3-222	ENST00000607805	POLR3GL	Q9BT43	218 aa		28.95	■■■□□ 2.22
NECAB3-222	ENST00000607805	PANK3	Q9H999	370 aa		28.95	■■■□□ 2.22
NECAB3-222	ENST00000607805	SCN11A	Q9UI33	1791 aa		28.95	■■■□□ 2.22
NECAB3-222	ENST00000607805	HSPA5	P11021	654 aa	Known RBP	28.93	■■■□□ 2.22
NECAB3-222	ENST00000607805	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.93	■■■□□ 2.22	2e-6	■■■■□ 22.4
NECAB3-222	ENST00000607805	DCAF5	Q96JK2	942 aa		28.93	■■■□□ 2.22
NECAB3-222	ENST00000607805	RC3H1	Q5TC82	1133 aa	Known RBP	28.91	■■■□□ 2.22
NECAB3-222	ENST00000607805	HSP90AB1	P08238	724 aa	Known RBP	28.9	■■■□□ 2.22
NECAB3-222	ENST00000607805	MMP10	P09238	476 aa		28.9	■■■□□ 2.22
NECAB3-222	ENST00000607805	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.9	■■■□□ 2.22
NECAB3-222	ENST00000607805	PXDNL	A1KZ92	1463 aa		28.9	■■■□□ 2.22
NECAB3-222	ENST00000607805	PCGF6	Q9BYE7	350 aa		28.89	■■■□□ 2.22
NECAB3-222	ENST00000607805	TJP1	Q07157	1748 aa		28.89	■■■□□ 2.21
NECAB3-222	ENST00000607805	RTCB	Q9Y3I0	505 aa	Known RBP	28.88	■■■□□ 2.21
NECAB3-222	ENST00000607805	CNTNAP4	Q9C0A0	1308 aa		28.88	■■■□□ 2.21
NECAB3-222	ENST00000607805	AMOT	Q4VCS5	1084 aa		28.87	■■■□□ 2.21
NECAB3-222	ENST00000607805	TRAPPC3L	Q5T215	181 aa		28.87	■■■□□ 2.21
NECAB3-222	ENST00000607805	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.87	■■■□□ 2.21
NECAB3-222	ENST00000607805	WWC3	Q9ULE0	1092 aa		28.87	■■■□□ 2.21
NECAB3-222	ENST00000607805	ARFGEF1	Q9Y6D6	1849 aa		28.86	■■■□□ 2.21
NECAB3-222	ENST00000607805	ADRA2B	P18089	450 aa		28.86	■■■□□ 2.21
NECAB3-222	ENST00000607805	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.86	■■■□□ 2.21
NECAB3-222	ENST00000607805	AEBP1	Q8IUX7	1158 aa		28.86	■■■□□ 2.21
NECAB3-222	ENST00000607805	RBM42	Q9BTD8	480 aa	Known RBP	28.86	■■■□□ 2.21
NECAB3-222	ENST00000607805	C10orf71	Q711Q0	1435 aa		28.86	■■■□□ 2.21
NECAB3-222	ENST00000607805	NLGN1	Q8N2Q7	840 aa		28.85	■■■□□ 2.21
NECAB3-222	ENST00000607805	ARHGEF1	Q92888	912 aa	Known RBP	28.85	■■■□□ 2.21
NECAB3-222	ENST00000607805	ADAMTS7	Q9UKP4	1686 aa		28.85	■■■□□ 2.21
NECAB3-222	ENST00000607805	RPS6KA4	O75676	772 aa		28.84	■■■□□ 2.21
NECAB3-222	ENST00000607805	GYS1	P13807	737 aa		28.83	■■■□□ 2.21
NECAB3-222	ENST00000607805	CABP4	P57796	275 aa		28.82	■■■□□ 2.2
NECAB3-222	ENST00000607805	TGFB2	P61812	414 aa		28.82	■■■□□ 2.2
NECAB3-222	ENST00000607805	MORC1	Q86VD1	984 aa		28.81	■■■□□ 2.2
NECAB3-222	ENST00000607805	MTHFS	P49914	203 aa		28.8	■■■□□ 2.2
NECAB3-222	ENST00000607805	IL13	P35225	146 aa		28.79	■■■□□ 2.2
NECAB3-222	ENST00000607805	NFATC2IP	Q8NCF5	419 aa		28.78	■■■□□ 2.2
NECAB3-222	ENST00000607805	ZNF526	Q8TF50	670 aa	Predicted RBP	28.78	■■■□□ 2.2
NECAB3-222	ENST00000607805	SULT6B1	Q6IMI4	303 aa		28.77	■■■□□ 2.2
NECAB3-222	ENST00000607805		A0A0G2JLW4	131 aa		28.76	■■■□□ 2.19
NECAB3-222	ENST00000607805	RFC4	P35249	363 aa		28.76	■■■□□ 2.19
NECAB3-222	ENST00000607805	C1orf141	Q5JVX7	400 aa		28.76	■■■□□ 2.19
NECAB3-222	ENST00000607805	KIF3C	O14782	793 aa		28.75	■■■□□ 2.19
NECAB3-222	ENST00000607805	SBF1	O95248	1867 aa		28.74	■■■□□ 2.19
NECAB3-222	ENST00000607805	PTCD1	O75127	700 aa	Known RBP	28.74	■■■□□ 2.19
NECAB3-222	ENST00000607805	CRKL	P46109	303 aa	Known RBP	28.74	■■■□□ 2.19
NECAB3-222	ENST00000607805	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.74	■■■□□ 2.19
NECAB3-222	ENST00000607805	CCDC87	Q9NVE4	849 aa		28.74	■■■□□ 2.19
NECAB3-222	ENST00000607805	KNSTRN	Q9Y448	316 aa		28.74	■■■□□ 2.19
NECAB3-222	ENST00000607805	HSPA6	P17066	643 aa		28.73	■■■□□ 2.19
NECAB3-222	ENST00000607805	AFDN	P55196	1824 aa	Known RBP	28.73	■■■□□ 2.19
NECAB3-222	ENST00000607805	DPEP1	P16444	411 aa		28.72	■■■□□ 2.19
NECAB3-222	ENST00000607805	KCNA3	P22001	575 aa		28.72	■■■□□ 2.19
NECAB3-222	ENST00000607805	MRC1	P22897	1456 aa		28.72	■■■□□ 2.19
NECAB3-222	ENST00000607805	BCS1L	Q9Y276	419 aa		28.71	■■■□□ 2.19
NECAB3-222	ENST00000607805	PARP3	Q9Y6F1	533 aa		28.71	■■■□□ 2.19
NECAB3-222	ENST00000607805	USP42	Q9H9J4	1324 aa	Known RBP	28.69	■■■□□ 2.18
NECAB3-222	ENST00000607805	INTS5	Q6P9B9	1019 aa	Known RBP	28.69	■■■□□ 2.18
NECAB3-222	ENST00000607805	SRP68	Q9UHB9	627 aa	Known RBP	28.69	■■■□□ 2.18
NECAB3-222	ENST00000607805	UBR2	Q8IWV8	1755 aa		28.69	■■■□□ 2.18
NECAB3-222	ENST00000607805	FKBP8	Q14318	412 aa		28.68	■■■□□ 2.18
NECAB3-222	ENST00000607805	AKAP4	Q5JQC9	854 aa		28.68	■■■□□ 2.18
NECAB3-222	ENST00000607805	DDR1	Q08345	913 aa		28.67	■■■□□ 2.18
NECAB3-222	ENST00000607805	NRXN2	Q9P2S2	1712 aa		28.66	■■■□□ 2.18
NECAB3-222	ENST00000607805	SLC52A2	Q9HAB3	445 aa		28.66	■■■□□ 2.18
NECAB3-222	ENST00000607805	KCP	Q6ZWJ8	1503 aa		28.65	■■■□□ 2.18
NECAB3-222	ENST00000607805	LGR6	Q9HBX8	967 aa		28.65	■■■□□ 2.18
NECAB3-222	ENST00000607805	FCHSD2	O94868	740 aa		28.64	■■■□□ 2.18
NECAB3-222	ENST00000607805	KIF7	Q2M1P5	1343 aa		28.64	■■■□□ 2.17
NECAB3-222	ENST00000607805	DLEC1	Q9Y238	1755 aa		28.63	■■■□□ 2.17
NECAB3-222	ENST00000607805	TM4SF1	P30408	202 aa		28.63	■■■□□ 2.17
NECAB3-222	ENST00000607805	ARHGAP27	Q6ZUM4	889 aa		28.63	■■■□□ 2.17
NECAB3-222	ENST00000607805	PER1	O15534	1290 aa	Predicted RBP	28.62	■■■□□ 2.17
NECAB3-222	ENST00000607805	DNAJC10	Q8IXB1	793 aa		28.62	■■■□□ 2.17
NECAB3-222	ENST00000607805	RNMT	O43148	476 aa	Known RBP	28.61	■■■□□ 2.17
NECAB3-222	ENST00000607805	PIM2	Q9P1W9	311 aa		28.61	■■■□□ 2.17
NECAB3-222	ENST00000607805	SOS1	Q07889	1333 aa	Predicted RBP	28.61	■■■□□ 2.17
NECAB3-222	ENST00000607805	SIPA1L3	O60292	1781 aa	Predicted RBP	28.6	■■■□□ 2.17
NECAB3-222	ENST00000607805	POLRMT	O00411	1230 aa	Known RBP	28.6	■■■□□ 2.17
NECAB3-222	ENST00000607805	CCER1	Q8TC90	406 aa	Predicted RBP	28.6	■■■□□ 2.17
NECAB3-222	ENST00000607805	CCDC88A	Q3V6T2	1871 aa		28.59	■■■□□ 2.17
NECAB3-222	ENST00000607805	CYP19A1	P11511	503 aa	Predicted RBP	28.59	■■■□□ 2.17
NECAB3-222	ENST00000607805	HMOX1	P09601	288 aa		28.57	■■■□□ 2.16
NECAB3-222	ENST00000607805	SLC39A6	Q13433	755 aa		28.57	■■■□□ 2.16
NECAB3-222	ENST00000607805	TOMM70	O94826	608 aa		28.56	■■■□□ 2.16
NECAB3-222	ENST00000607805	MTHFSD	Q2M296	383 aa	Known RBP	28.56	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms