RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 PIK3R2O00459 728 aa8.47□□□□□ -1.05
RNU4-89P-201ENST00000607443 GNB5O14775 395 aa8.47□□□□□ -1.05
RNU4-89P-201ENST00000607443 AMPD1P23109 780 aa8.47□□□□□ -1.05
RNU4-89P-201ENST00000607443 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
RNU4-89P-201ENST00000607443 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
RNU4-89P-201ENST00000607443 DCAF1Q9Y4B6 1507 aa8.46□□□□□ -1.05
RNU4-89P-201ENST00000607443 C2CD2LO14523 706 aa8.46□□□□□ -1.06
RNU4-89P-201ENST00000607443 CHRNA4P43681 627 aa8.46□□□□□ -1.06
RNU4-89P-201ENST00000607443 GPAMQ9HCL2 828 aa8.46□□□□□ -1.06
RNU4-89P-201ENST00000607443 ZMYM1Q5SVZ6 1142 aa8.45□□□□□ -1.06
RNU4-89P-201ENST00000607443 CYP2U1Q7Z449 544 aa8.45□□□□□ -1.06
RNU4-89P-201ENST00000607443 BTBD6Q96KE9 485 aa8.45□□□□□ -1.06
RNU4-89P-201ENST00000607443 DOC2BQ14184 412 aa8.44□□□□□ -1.06
RNU4-89P-201ENST00000607443 SLCO4C1Q6ZQN7 724 aa8.44□□□□□ -1.06
RNU4-89P-201ENST00000607443 GGA1Q9UJY5 639 aa8.44□□□□□ -1.06
RNU4-89P-201ENST00000607443 PCDHB9Q9Y5E1 797 aa8.44□□□□□ -1.06
RNU4-89P-201ENST00000607443 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
RNU4-89P-201ENST00000607443 BMP4P12644 408 aa8.43□□□□□ -1.06
RNU4-89P-201ENST00000607443 SCTRP47872 440 aa8.43□□□□□ -1.06
RNU4-89P-201ENST00000607443 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
RNU4-89P-201ENST00000607443 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
RNU4-89P-201ENST00000607443 ARHGEF10LQ9HCE6 1279 aa8.43□□□□□ -1.06
RNU4-89P-201ENST00000607443 A0A1B0GTH6 734 aa8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 TRAK2O60296 914 aa8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 PHKA2P46019 1235 aa8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 OSBPL3Q9H4L5 887 aa8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 NOP53Q9NZM5 478 aaKnown RBP8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 ATXN7L1Q9ULK2 861 aaPredicted RBP8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
RNU4-89P-201ENST00000607443 BICRAQ9NZM4 1560 aa8.41□□□□□ -1.06
RNU4-89P-201ENST00000607443 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
RNU4-89P-201ENST00000607443 EPXP11678 715 aa8.41□□□□□ -1.06
RNU4-89P-201ENST00000607443 CTBSQ01459 385 aa8.41□□□□□ -1.06
RNU4-89P-201ENST00000607443 CENPCQ03188 943 aa8.41□□□□□ -1.06
RNU4-89P-201ENST00000607443 SHROOM4Q9ULL8 1493 aa8.4□□□□□ -1.06
RNU4-89P-201ENST00000607443 DGKGP49619 791 aa8.4□□□□□ -1.06
RNU4-89P-201ENST00000607443 CNKSR1Q969H4 720 aa8.4□□□□□ -1.06
RNU4-89P-201ENST00000607443 ESYT1Q9BSJ8 1104 aa8.4□□□□□ -1.06
RNU4-89P-201ENST00000607443 TRIM34Q9BYJ4 488 aa8.4□□□□□ -1.06
RNU4-89P-201ENST00000607443 CSB-PGBD3P0DP91 1061 aa8.39□□□□□ -1.07
RNU4-89P-201ENST00000607443 LCE3BQ5TA77 95 aa8.39□□□□□ -1.07
RNU4-89P-201ENST00000607443 PGBD3Q8N328 593 aa8.39□□□□□ -1.07
RNU4-89P-201ENST00000607443 ABHD17AQ96GS6 310 aa8.39□□□□□ -1.07
RNU4-89P-201ENST00000607443 KRTAP4-12Q9BQ66 201 aa8.39□□□□□ -1.07
RNU4-89P-201ENST00000607443 RUBCNLQ9H714 662 aa8.39□□□□□ -1.07
RNU4-89P-201ENST00000607443 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
RNU4-89P-201ENST00000607443 BNIP3LO60238 219 aa8.38□□□□□ -1.07
RNU4-89P-201ENST00000607443 GNRH1P01148 92 aa8.38□□□□□ -1.07
RNU4-89P-201ENST00000607443 FGFR3P22607 806 aa8.38□□□□□ -1.07
RNU4-89P-201ENST00000607443 ESF1Q9H501 851 aaKnown RBP8.38□□□□□ -1.07
RNU4-89P-201ENST00000607443 RAB6BQ9NRW1 208 aa8.38□□□□□ -1.07
RNU4-89P-201ENST00000607443 IL2RAP01589 272 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 FBXO45P0C2W1 286 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 ARAFP10398 606 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 MSX1P28360 303 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 GATA4P43694 442 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 EFHC2Q5JST6 749 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 RNF135Q8IUD6 432 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 ZSCAN10Q96SZ4 725 aaPredicted RBP8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 HRH3Q9Y5N1 445 aa8.37□□□□□ -1.07
RNU4-89P-201ENST00000607443 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
RNU4-89P-201ENST00000607443 NEURL1BA8MQ27 555 aa8.35□□□□□ -1.07
RNU4-89P-201ENST00000607443 MCCD1P59942 119 aaPredicted RBP8.35□□□□□ -1.07
RNU4-89P-201ENST00000607443 C4orf17Q53FE4 359 aa8.35□□□□□ -1.07
RNU4-89P-201ENST00000607443 XAGE2Q96GT9 111 aa8.35□□□□□ -1.07
RNU4-89P-201ENST00000607443 FOXD4L6Q3SYB3 417 aaPredicted RBP8.34□□□□□ -1.07
RNU4-89P-201ENST00000607443 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
RNU4-89P-201ENST00000607443 FOXD4L3Q6VB84 417 aaPredicted RBP8.34□□□□□ -1.07
RNU4-89P-201ENST00000607443 CHSY3Q70JA7 882 aa8.34□□□□□ -1.07
RNU4-89P-201ENST00000607443 SCO2A0A1W2PP80 73 aa8.33□□□□□ -1.08
RNU4-89P-201ENST00000607443 RFC5P40937 340 aa8.33□□□□□ -1.08
RNU4-89P-201ENST00000607443 RSPO4Q2I0M5 234 aaPredicted RBP8.33□□□□□ -1.08
RNU4-89P-201ENST00000607443 TMEM214Q6NUQ4 689 aaKnown RBP8.33□□□□□ -1.08
RNU4-89P-201ENST00000607443 FHDC1Q9C0D6 1143 aaPredicted RBP8.33□□□□□ -1.08
RNU4-89P-201ENST00000607443 GTF2E1P29083 439 aaPredicted RBP8.32□□□□□ -1.08
RNU4-89P-201ENST00000607443 CRISPLD1Q9H336 500 aa8.32□□□□□ -1.08
RNU4-89P-201ENST00000607443 NKAPLQ5M9Q1 402 aa8.31□□□□□ -1.08
RNU4-89P-201ENST00000607443 FAM117AQ9C073 453 aa8.31□□□□□ -1.08
RNU4-89P-201ENST00000607443 KLF15Q9UIH9 416 aa8.31□□□□□ -1.08
RNU4-89P-201ENST00000607443 ARTNQ5T4W7 220 aa8.3□□□□□ -1.08
RNU4-89P-201ENST00000607443 TRIM11Q96F44 468 aa8.3□□□□□ -1.08
RNU4-89P-201ENST00000607443 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
RNU4-89P-201ENST00000607443 PLVAPQ9BX97 442 aa8.3□□□□□ -1.08
RNU4-89P-201ENST00000607443 ZCCHC2Q9C0B9 1178 aaKnown RBP8.3□□□□□ -1.08
RNU4-89P-201ENST00000607443 SPATA31C1P0DKV0 1188 aa8.29□□□□□ -1.08
RNU4-89P-201ENST00000607443 FIGNL1Q6PIW4 674 aa8.29□□□□□ -1.08
RNU4-89P-201ENST00000607443 ZFP64Q9NPA5 681 aa8.29□□□□□ -1.08
RNU4-89P-201ENST00000607443 PCDHGC4Q9Y5F7 938 aa8.29□□□□□ -1.08
RNU4-89P-201ENST00000607443 ADH6P28332 368 aa8.28□□□□□ -1.08
RNU4-89P-201ENST00000607443 ZNF592Q92610 1267 aa8.28□□□□□ -1.08
RNU4-89P-201ENST00000607443 GJD4Q96KN9 370 aaPredicted RBP8.28□□□□□ -1.08
RNU4-89P-201ENST00000607443 DNAAF2Q9NVR5 837 aaKnown RBP8.28□□□□□ -1.08
RNU4-89P-201ENST00000607443 NR1H3Q13133 447 aa8.27□□□□□ -1.09
RNU4-89P-201ENST00000607443 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
RNU4-89P-201ENST00000607443 PPARGC1BQ86YN6 1023 aaKnown RBP8.27□□□□□ -1.09
RNU4-89P-201ENST00000607443 RHBDD1Q8TEB9 315 aa8.27□□□□□ -1.09
RNU4-89P-201ENST00000607443 MYCP01106 439 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms