RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 KDM6AO15550 1401 aaPredicted RBP29.65■■■□□ 2.34
USF2-204ENST00000593708 GRIN3BO60391 1043 aa29.65■■■□□ 2.34
USF2-204ENST00000593708 ATP6V1AP38606 617 aa29.65■■■□□ 2.34
USF2-204ENST00000593708 C1QTNF8P60827 252 aa29.65■■■□□ 2.34
USF2-204ENST00000593708 ZNF831Q5JPB2 1677 aa29.65■■■□□ 2.34
USF2-204ENST00000593708 GNPATO15228 680 aa29.64■■■□□ 2.34
USF2-204ENST00000593708 SLC4A9Q96Q91 983 aa29.64■■■□□ 2.34
USF2-204ENST00000593708 AEBP1Q8IUX7 1158 aa29.62■■■□□ 2.33
USF2-204ENST00000593708 MYH14Q7Z406 1995 aaKnown RBP29.59■■■□□ 2.33
USF2-204ENST00000593708 ERVV-2B6SEH9 535 aa29.59■■■□□ 2.33
USF2-204ENST00000593708 ZNF530Q6P9A1 599 aaPredicted RBP29.58■■■□□ 2.33
USF2-204ENST00000593708 MORC1Q86VD1 984 aa29.58■■■□□ 2.33
USF2-204ENST00000593708 DCAF5Q96JK2 942 aa29.58■■■□□ 2.33
USF2-204ENST00000593708 WWC3Q9ULE0 1092 aa29.58■■■□□ 2.33
USF2-204ENST00000593708 KIAA1551Q9HCM1 1747 aa29.57■■■□□ 2.32
USF2-204ENST00000593708 SENP3-EIF4A1A0A087X0R7 540 aa29.57■■■□□ 2.32
USF2-204ENST00000593708 GIGYF1O75420 1035 aaPredicted RBP29.57■■■□□ 2.32
USF2-204ENST00000593708 CCER1Q8TC90 406 aaPredicted RBP29.57■■■□□ 2.32
USF2-204ENST00000593708 KIF13BQ9NQT8 1826 aa29.57■■■□□ 2.32
USF2-204ENST00000593708 PLEKHO1Q53GL0 409 aaPredicted RBP29.56■■■□□ 2.32
USF2-204ENST00000593708 ATP10DQ9P241 1426 aa29.55■■■□□ 2.32
USF2-204ENST00000593708 C4AP0C0L4 1744 aa29.55■■■□□ 2.32
USF2-204ENST00000593708 HSP90AB1P08238 724 aaKnown RBP29.54■■■□□ 2.32
USF2-204ENST00000593708 ADCY9O60503 1353 aa29.53■■■□□ 2.32
USF2-204ENST00000593708 CICQ96RK0 1608 aaPredicted RBP29.53■■■□□ 2.32
USF2-204ENST00000593708 RBM42Q9BTD8 480 aaKnown RBP29.53■■■□□ 2.32
USF2-204ENST00000593708 SCN11AQ9UI33 1791 aa29.53■■■□□ 2.32
USF2-204ENST00000593708 MMP10P09238 476 aa29.52■■■□□ 2.32
USF2-204ENST00000593708 AMOTQ4VCS5 1084 aa29.52■■■□□ 2.32
USF2-204ENST00000593708 N4BP2Q86UW6 1770 aaPredicted RBP29.51■■■□□ 2.31
USF2-204ENST00000593708 TJP1Q07157 1748 aa29.51■■■□□ 2.31
USF2-204ENST00000593708 CABP4P57796 275 aa29.5■■■□□ 2.31
USF2-204ENST00000593708 AMER1Q5JTC6 1135 aaPredicted RBP29.5■■■□□ 2.31
USF2-204ENST00000593708 SULT6B1Q6IMI4 303 aa29.5■■■□□ 2.31
USF2-204ENST00000593708 RTCBQ9Y3I0 505 aaKnown RBP29.5■■■□□ 2.31
USF2-204ENST00000593708 KNSTRNQ9Y448 316 aa29.5■■■□□ 2.31
USF2-204ENST00000593708 PXDNLA1KZ92 1463 aa29.49■■■□□ 2.31
USF2-204ENST00000593708 CNTNAP4Q9C0A0 1308 aa29.49■■■□□ 2.31
USF2-204ENST00000593708 IL13P35225 146 aa29.49■■■□□ 2.31
USF2-204ENST00000593708 MTHFSP49914 203 aa29.48■■■□□ 2.31
USF2-204ENST00000593708 TRAPPC3LQ5T215 181 aa29.48■■■□□ 2.31
USF2-204ENST00000593708 VIRMAQ69YN4 1812 aaKnown RBP29.48■■■□□ 2.31
USF2-204ENST00000593708 RC3H1Q5TC82 1133 aaKnown RBP29.47■■■□□ 2.31
USF2-204ENST00000593708 ARHGEF1Q92888 912 aaKnown RBP29.47■■■□□ 2.31
USF2-204ENST00000593708 KIF7Q2M1P5 1343 aa29.46■■■□□ 2.31
USF2-204ENST00000593708 C1orf141Q5JVX7 400 aa29.46■■■□□ 2.31
USF2-204ENST00000593708 C10orf71Q711Q0 1435 aa29.45■■■□□ 2.31
USF2-204ENST00000593708 PTCD1O75127 700 aaKnown RBP29.45■■■□□ 2.31
USF2-204ENST00000593708 NFATC2IPQ8NCF5 419 aa29.45■■■□□ 2.31
USF2-204ENST00000593708 ADRA2BP18089 450 aa29.44■■■□□ 2.3
USF2-204ENST00000593708 BRCA1P38398 1863 aaKnown RBP29.44■■■□□ 2.3
USF2-204ENST00000593708 RPS6KA4O75676 772 aa29.43■■■□□ 2.3
USF2-204ENST00000593708 GYS1P13807 737 aa29.43■■■□□ 2.3
USF2-204ENST00000593708 ADAMTS7Q9UKP4 1686 aa29.41■■■□□ 2.3
USF2-204ENST00000593708 NLGN1Q8N2Q7 840 aa29.41■■■□□ 2.3
USF2-204ENST00000593708 RFC4P35249 363 aa29.39■■■□□ 2.3
USF2-204ENST00000593708 CRKLP46109 303 aaKnown RBP29.39■■■□□ 2.3
USF2-204ENST00000593708 ZNF526Q8TF50 670 aaPredicted RBP29.39■■■□□ 2.3
USF2-204ENST00000593708 MRC1P22897 1456 aa29.39■■■□□ 2.3
USF2-204ENST00000593708 GPBP1L1Q9HC44 474 aaPredicted RBP29.38■■■□□ 2.29
USF2-204ENST00000593708 A0A0G2JLW4 131 aa29.37■■■□□ 2.29
USF2-204ENST00000593708 SRP68Q9UHB9 627 aaKnown RBP29.36■■■□□ 2.29
USF2-204ENST00000593708 PER1O15534 1290 aaPredicted RBP29.35■■■□□ 2.29
USF2-204ENST00000593708 HMOX1P09601 288 aa29.35■■■□□ 2.29
USF2-204ENST00000593708 LGR6Q9HBX8 967 aa29.35■■■□□ 2.29
USF2-204ENST00000593708 TGFB2P61812 414 aa29.34■■■□□ 2.29
USF2-204ENST00000593708 AKAP4Q5JQC9 854 aa29.34■■■□□ 2.29
USF2-204ENST00000593708 SLC52A2Q9HAB3 445 aa29.33■■■□□ 2.29
USF2-204ENST00000593708 KCPQ6ZWJ8 1503 aa29.32■■■□□ 2.28
USF2-204ENST00000593708 USP42Q9H9J4 1324 aaKnown RBP29.32■■■□□ 2.28
USF2-204ENST00000593708 DPEP1P16444 411 aa29.32■■■□□ 2.28
USF2-204ENST00000593708 INTS5Q6P9B9 1019 aaKnown RBP29.32■■■□□ 2.28
USF2-204ENST00000593708 CCDC87Q9NVE4 849 aa29.32■■■□□ 2.28
USF2-204ENST00000593708 DDR1Q08345 913 aa29.31■■■□□ 2.28
USF2-204ENST00000593708 FKBP8Q14318 412 aa29.31■■■□□ 2.28
USF2-204ENST00000593708 BCS1LQ9Y276 419 aa29.31■■■□□ 2.28
USF2-204ENST00000593708 PARP3Q9Y6F1 533 aa29.31■■■□□ 2.28
USF2-204ENST00000593708 ARFGEF1Q9Y6D6 1849 aa29.31■■■□□ 2.28
USF2-204ENST00000593708 CC2D1BQ5T0F9 858 aaKnown RBP29.3■■■□□ 2.28
USF2-204ENST00000593708 DNAJC10Q8IXB1 793 aa29.3■■■□□ 2.28
USF2-204ENST00000593708 COL3A1P02461 1466 aaPredicted RBP29.29■■■□□ 2.28
USF2-204ENST00000593708 UBR2Q8IWV8 1755 aa29.29■■■□□ 2.28
USF2-204ENST00000593708 RNMTO43148 476 aaKnown RBP29.28■■■□□ 2.28
USF2-204ENST00000593708 KCNA3P22001 575 aa29.28■■■□□ 2.28
USF2-204ENST00000593708 SLC39A6Q13433 755 aa29.28■■■□□ 2.28
USF2-204ENST00000593708 MTHFSDQ2M296 383 aaKnown RBP29.27■■■□□ 2.28
USF2-204ENST00000593708 DIAPH1O60610 1272 aaKnown RBP29.25■■■□□ 2.27
USF2-204ENST00000593708 SOS1Q07889 1333 aaPredicted RBP29.24■■■□□ 2.27
USF2-204ENST00000593708 AFDNP55196 1824 aaKnown RBP29.24■■■□□ 2.27
USF2-204ENST00000593708 KIF3CO14782 793 aa29.23■■■□□ 2.27
USF2-204ENST00000593708 FCHSD2O94868 740 aa29.23■■■□□ 2.27
USF2-204ENST00000593708 CYP19A1P11511 503 aaPredicted RBP29.22■■■□□ 2.27
USF2-204ENST00000593708 ARHGAP27Q6ZUM4 889 aa29.21■■■□□ 2.27
USF2-204ENST00000593708 POLRMTO00411 1230 aaKnown RBP29.2■■■□□ 2.26
USF2-204ENST00000593708 SIPA1L3O60292 1781 aaPredicted RBP29.2■■■□□ 2.26
USF2-204ENST00000593708 NPC1L1Q9UHC9 1359 aa29.19■■■□□ 2.26
USF2-204ENST00000593708 TM4SF1P30408 202 aa29.19■■■□□ 2.26
USF2-204ENST00000593708 USPL1Q5W0Q7 1092 aa29.19■■■□□ 2.26
USF2-204ENST00000593708 ZBTB1Q9Y2K1 713 aa29.19■■■□□ 2.26
USF2-204ENST00000593708 COL15A1P39059 1388 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms