RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CCDC155Q8N6L0 562 aa7.49□□□□□ -1.21
VAPA-206ENST00000583475 ZSCAN10Q96SZ4 725 aaPredicted RBP7.49□□□□□ -1.21
VAPA-206ENST00000583475 SERTAD1Q9UHV2 236 aa7.49□□□□□ -1.21
VAPA-206ENST00000583475 KIAA1024Q9UPX6 916 aa7.49□□□□□ -1.21
VAPA-206ENST00000583475 SMTNP53814 917 aa7.48□□□□□ -1.21
VAPA-206ENST00000583475 WDR44Q5JSH3 913 aa7.48□□□□□ -1.21
VAPA-206ENST00000583475 NBPF10Q6P3W6 841 aaKnown RBP7.48□□□□□ -1.21
VAPA-206ENST00000583475 NBPF15Q8N660 670 aa7.48□□□□□ -1.21
VAPA-206ENST00000583475 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.48□□□□□ -1.21
VAPA-206ENST00000583475 DNAAF2Q9NVR5 837 aaKnown RBP7.48□□□□□ -1.21
VAPA-206ENST00000583475 ARID3CA6NKF2 412 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 DKK1O94907 266 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 ATP1A2P50993 1020 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 PSME1Q06323 249 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 TLR1Q15399 786 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 CCDC102BQ68D86 513 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 PPARGC1BQ86YN6 1023 aaKnown RBP7.47□□□□□ -1.21
VAPA-206ENST00000583475 LARGE2Q8N3Y3 721 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 SLC16A10Q8TF71 515 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 ZNF358Q9NW07 568 aa7.47□□□□□ -1.21
VAPA-206ENST00000583475 A6NJY4 79 aa7.46□□□□□ -1.22
VAPA-206ENST00000583475 RASA1P20936 1047 aa7.46□□□□□ -1.22
VAPA-206ENST00000583475 MTFR1Q15390 333 aa7.46□□□□□ -1.22
VAPA-206ENST00000583475 TMEM214Q6NUQ4 689 aaKnown RBP7.46□□□□□ -1.22
VAPA-206ENST00000583475 TAS1R3Q7RTX0 852 aa7.46□□□□□ -1.22
VAPA-206ENST00000583475 TPCN2Q8NHX9 752 aa7.46□□□□□ -1.22
VAPA-206ENST00000583475 VRTNQ9H8Y1 702 aa7.46□□□□□ -1.22
VAPA-206ENST00000583475 ERBB4Q15303 1308 aa7.46□□□□□ -1.22
VAPA-206ENST00000583475 BACH1O14867 736 aa7.45□□□□□ -1.22
VAPA-206ENST00000583475 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
VAPA-206ENST00000583475 DYRK1BQ9Y463 629 aa7.45□□□□□ -1.22
VAPA-206ENST00000583475 CDK2AP1O14519 115 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 VSIG8P0DPA2 414 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 RFX1P22670 979 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 ITGA6P23229 1130 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 PHKA2P46019 1235 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 SRPK2P78362 688 aaKnown RBP7.44□□□□□ -1.22
VAPA-206ENST00000583475 PTK7Q13308 1070 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 CRTC2Q53ET0 693 aaPredicted RBP7.44□□□□□ -1.22
VAPA-206ENST00000583475 C4orf17Q53FE4 359 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 SIX5Q8N196 739 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 NANOS1Q8WY41 292 aaKnown RBP7.44□□□□□ -1.22
VAPA-206ENST00000583475 ZNF594Q96JF6 807 aaPredicted RBP7.44□□□□□ -1.22
VAPA-206ENST00000583475 C1orf115Q9H7X2 142 aa7.44□□□□□ -1.22
VAPA-206ENST00000583475 GTF2E1P29083 439 aaPredicted RBP7.43□□□□□ -1.22
VAPA-206ENST00000583475 EPHA4P54764 986 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 CDCA8Q53HL2 280 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 GNASQ5JWF2 1037 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 TNS4Q8IZW8 715 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
VAPA-206ENST00000583475 RHBDD1Q8TEB9 315 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 IRF7Q92985 503 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 TIMMDC1Q9NPL8 285 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 CUEDC1Q9NWM3 386 aaPredicted RBP7.43□□□□□ -1.22
VAPA-206ENST00000583475 SCHIP1Q9P0W5 487 aaPredicted RBP7.43□□□□□ -1.22
VAPA-206ENST00000583475 USP3Q9Y6I4 520 aa7.43□□□□□ -1.22
VAPA-206ENST00000583475 SFI1A8K8P3 1242 aa7.42□□□□□ -1.22
VAPA-206ENST00000583475 LARP1Q6PKG0 1096 aaKnown RBP7.42□□□□□ -1.22
VAPA-206ENST00000583475 ERICH6Q7L0X2 663 aa7.42□□□□□ -1.22
VAPA-206ENST00000583475 VWA5B2Q8N398 1253 aa7.42□□□□□ -1.22
VAPA-206ENST00000583475 SERPINA10Q9UK55 444 aa7.42□□□□□ -1.22
VAPA-206ENST00000583475 FAM196BA6NMK8 535 aa7.41□□□□□ -1.22
VAPA-206ENST00000583475 M0R2N6 131 aa7.41□□□□□ -1.22
VAPA-206ENST00000583475 GMPRP36959 345 aa7.41□□□□□ -1.22
VAPA-206ENST00000583475 FOXK2Q01167 660 aa7.41□□□□□ -1.22
VAPA-206ENST00000583475 DBN1Q16643 649 aa7.41□□□□□ -1.22
VAPA-206ENST00000583475 GAS2L1Q99501 681 aaPredicted RBP7.41□□□□□ -1.22
VAPA-206ENST00000583475 NIFKQ9BYG3 293 aaKnown RBP7.41□□□□□ -1.22
VAPA-206ENST00000583475 TIMELESSQ9UNS1 1208 aa7.41□□□□□ -1.22
VAPA-206ENST00000583475 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L21D6R901 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 F11P03951 625 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 DPYDQ12882 1025 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 ANKMY2Q8IV38 441 aa7.4□□□□□ -1.22
VAPA-206ENST00000583475 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
VAPA-206ENST00000583475 WIPF1O43516 503 aa7.39□□□□□ -1.23
VAPA-206ENST00000583475 SEC13P55735 322 aa7.39□□□□□ -1.23
VAPA-206ENST00000583475 RIPOR1Q6ZS17 1223 aa7.39□□□□□ -1.23
VAPA-206ENST00000583475 TRIM22Q8IYM9 498 aa7.39□□□□□ -1.23
VAPA-206ENST00000583475 TSEN2Q8NCE0 465 aaKnown RBP7.39□□□□□ -1.23
VAPA-206ENST00000583475 ARXQ96QS3 562 aa7.39□□□□□ -1.23
VAPA-206ENST00000583475 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
VAPA-206ENST00000583475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.38□□□□□ -1.23
VAPA-206ENST00000583475 A0A1B0GTH6 734 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 CDC14CA4D256 554 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 MSX1P28360 303 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 TBCELQ5QJ74 424 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 SV2AQ7L0J3 742 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 SLC9A9Q8IVB4 645 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms