RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 IP6K1Q92551 441 aa14.39□□□□□ -0.11
LINC00564-201ENST00000567258 LTV1Q96GA3 475 aaPredicted RBP14.39□□□□□ -0.11
LINC00564-201ENST00000567258 PLSCR1O15162 318 aa14.38□□□□□ -0.11
LINC00564-201ENST00000567258 TNS2Q63HR2 1409 aa14.38□□□□□ -0.11
LINC00564-201ENST00000567258 POTEB3A0JP26 581 aa14.37□□□□□ -0.11
LINC00564-201ENST00000567258 FAM205CA6NFA0 338 aa14.37□□□□□ -0.11
LINC00564-201ENST00000567258 POTEBQ6S5H4 581 aa14.37□□□□□ -0.11
LINC00564-201ENST00000567258 HS3ST6Q96QI5 342 aa14.37□□□□□ -0.11
LINC00564-201ENST00000567258 BCL9O00512 1426 aa14.36□□□□□ -0.11
LINC00564-201ENST00000567258 POLR3GLQ9BT43 218 aa14.36□□□□□ -0.11
LINC00564-201ENST00000567258 GGNBP2Q9H3C7 697 aa14.36□□□□□ -0.11
LINC00564-201ENST00000567258 CIZ1Q9ULV3 898 aaPredicted RBP14.36□□□□□ -0.11
LINC00564-201ENST00000567258 RGPD2P0DJD1 1756 aa14.36□□□□□ -0.11
LINC00564-201ENST00000567258 SMG6Q86US8 1419 aaKnown RBP14.35□□□□□ -0.11
LINC00564-201ENST00000567258 HOXC9P31274 260 aa14.35□□□□□ -0.11
LINC00564-201ENST00000567258 MAP3K19Q56UN5 1328 aa14.35□□□□□ -0.11
LINC00564-201ENST00000567258 NHSQ6T4R5 1651 aa14.34□□□□□ -0.11
LINC00564-201ENST00000567258 FYB1O15117 783 aa14.34□□□□□ -0.11
LINC00564-201ENST00000567258 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
LINC00564-201ENST00000567258 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
LINC00564-201ENST00000567258 MYOM1P52179 1685 aa14.33□□□□□ -0.11
LINC00564-201ENST00000567258 EIF4G2P78344 907 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC00564-201ENST00000567258 MAP2P11137 1827 aaKnown RBP14.32□□□□□ -0.12
LINC00564-201ENST00000567258 G3V3G9 751 aa14.32□□□□□ -0.12
LINC00564-201ENST00000567258 RRS1Q15050 365 aaKnown RBP14.32□□□□□ -0.12
LINC00564-201ENST00000567258 IFNLR1Q8IU57 520 aaPredicted RBP14.32□□□□□ -0.12
LINC00564-201ENST00000567258 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
LINC00564-201ENST00000567258 ACSBG1Q96GR2 724 aa14.32□□□□□ -0.12
LINC00564-201ENST00000567258 KRTAP3-3Q9BYR6 98 aa14.32□□□□□ -0.12
LINC00564-201ENST00000567258 KRTAP3-2Q9BYR7 98 aa14.32□□□□□ -0.12
LINC00564-201ENST00000567258 BTAF1O14981 1849 aa14.31□□□□□ -0.12
LINC00564-201ENST00000567258 FBLN1P23142 703 aa14.31□□□□□ -0.12
LINC00564-201ENST00000567258 PPP1R1BQ9UD71 204 aaPredicted RBP14.31□□□□□ -0.12
LINC00564-201ENST00000567258 BOLA1Q9Y3E2 137 aa14.31□□□□□ -0.12
LINC00564-201ENST00000567258 TXNRD1Q16881 649 aa14.3□□□□□ -0.12
LINC00564-201ENST00000567258 PTF1AQ7RTS3 328 aa14.3□□□□□ -0.12
LINC00564-201ENST00000567258 RAPGEF4Q8WZA2 1011 aa14.3□□□□□ -0.12
LINC00564-201ENST00000567258 SPON1Q9HCB6 807 aa14.3□□□□□ -0.12
LINC00564-201ENST00000567258 STK32BQ9NY57 414 aa14.3□□□□□ -0.12
LINC00564-201ENST00000567258 CGNL1Q0VF96 1302 aa14.3□□□□□ -0.12
LINC00564-201ENST00000567258 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
LINC00564-201ENST00000567258 KCNQ2O43526 872 aa14.29□□□□□ -0.12
LINC00564-201ENST00000567258 PPM1GO15355 546 aaPredicted RBP14.28□□□□□ -0.12
LINC00564-201ENST00000567258 FLT4P35916 1363 aa14.28□□□□□ -0.12
LINC00564-201ENST00000567258 KIF24Q5T7B8 1368 aa14.28□□□□□ -0.12
LINC00564-201ENST00000567258 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
LINC00564-201ENST00000567258 SYTL4Q96C24 671 aaPredicted RBP14.28□□□□□ -0.12
LINC00564-201ENST00000567258 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
LINC00564-201ENST00000567258 INSRP06213 1382 aa14.26□□□□□ -0.13
LINC00564-201ENST00000567258 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
LINC00564-201ENST00000567258 CARD14Q9BXL6 1004 aa14.26□□□□□ -0.13
LINC00564-201ENST00000567258 DOT1LQ8TEK3 1739 aa14.26□□□□□ -0.13
LINC00564-201ENST00000567258 ANKRD26Q9UPS8 1709 aa14.26□□□□□ -0.13
LINC00564-201ENST00000567258 HOXB3P14651 431 aaPredicted RBP14.25□□□□□ -0.13
LINC00564-201ENST00000567258 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
LINC00564-201ENST00000567258 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
LINC00564-201ENST00000567258 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
LINC00564-201ENST00000567258 SLC15A2Q16348 729 aa14.24□□□□□ -0.13
LINC00564-201ENST00000567258 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
LINC00564-201ENST00000567258 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
LINC00564-201ENST00000567258 SHANK3Q9BYB0 1731 aa14.24□□□□□ -0.13
LINC00564-201ENST00000567258 CASZ1Q86V15 1759 aa14.22□□□□□ -0.13
LINC00564-201ENST00000567258 MEGF6O75095 1541 aa14.22□□□□□ -0.13
LINC00564-201ENST00000567258 PRIM1P49642 420 aaKnown RBP14.22□□□□□ -0.13
LINC00564-201ENST00000567258 EMILIN1Q9Y6C2 1016 aa14.22□□□□□ -0.13
LINC00564-201ENST00000567258 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.13
LINC00564-201ENST00000567258 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.13
LINC00564-201ENST00000567258 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
LINC00564-201ENST00000567258 TNNT2P45379 298 aaPredicted RBP14.21□□□□□ -0.13
LINC00564-201ENST00000567258 SLC27A3Q5K4L6 730 aa14.21□□□□□ -0.13
LINC00564-201ENST00000567258 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
LINC00564-201ENST00000567258 ZBTB7AO95365 584 aa14.2□□□□□ -0.14
LINC00564-201ENST00000567258 PANK3Q9H999 370 aa14.2□□□□□ -0.14
LINC00564-201ENST00000567258 LY75O60449 1722 aa14.19□□□□□ -0.14
LINC00564-201ENST00000567258 SPG7Q9UQ90 795 aa14.19□□□□□ -0.14
LINC00564-201ENST00000567258 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
LINC00564-201ENST00000567258 ITGB4P16144 1822 aa14.18□□□□□ -0.14
LINC00564-201ENST00000567258 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
LINC00564-201ENST00000567258 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
LINC00564-201ENST00000567258 EFCAB3Q8N7B9 438 aa14.17□□□□□ -0.14
LINC00564-201ENST00000567258 MTFR1LQ9H019 292 aa14.17□□□□□ -0.14
LINC00564-201ENST00000567258 QSER1Q2KHR3 1735 aa14.17□□□□□ -0.14
LINC00564-201ENST00000567258 PKD1L3Q7Z443 1732 aa14.17□□□□□ -0.14
LINC00564-201ENST00000567258 NSD2O96028 1365 aa14.17□□□□□ -0.14
LINC00564-201ENST00000567258 DOK7Q18PE1 504 aa14.16□□□□□ -0.14
LINC00564-201ENST00000567258 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
LINC00564-201ENST00000567258 TFCP2L1Q9NZI6 479 aa14.16□□□□□ -0.14
LINC00564-201ENST00000567258 POLKQ9UBT6 870 aa14.16□□□□□ -0.14
LINC00564-201ENST00000567258 PAPPAQ13219 1627 aa14.15□□□□□ -0.14
LINC00564-201ENST00000567258 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
LINC00564-201ENST00000567258 LRRC4BQ9NT99 713 aa14.15□□□□□ -0.14
LINC00564-201ENST00000567258 CCNL1Q9UK58 526 aaPredicted RBP14.15□□□□□ -0.14
LINC00564-201ENST00000567258 MPRIPQ6WCQ1 1025 aa14.14□□□□□ -0.15
LINC00564-201ENST00000567258 EYA1Q99502 592 aa14.14□□□□□ -0.15
LINC00564-201ENST00000567258 ZNF827Q17R98 1081 aa14.13□□□□□ -0.15
LINC00564-201ENST00000567258 SLC16A10Q8TF71 515 aa14.13□□□□□ -0.15
LINC00564-201ENST00000567258 SMARCC1Q92922 1105 aaPredicted RBP14.13□□□□□ -0.15
LINC00564-201ENST00000567258 TUBGCP6Q96RT7 1819 aa14.13□□□□□ -0.15
LINC00564-201ENST00000567258 C5P01031 1676 aa14.12□□□□□ -0.15
LINC00564-201ENST00000567258 POLD1P28340 1107 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms