RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 STK31Q9BXU1 1019 aa8.9□□□□□ -0.99
SMG1-210ENST00000565224 IGSF1Q8N6C5 1336 aa8.89□□□□□ -0.99
SMG1-210ENST00000565224 PKP1Q13835 747 aa8.89□□□□□ -0.99
SMG1-210ENST00000565224 ZGPATQ8N5A5 531 aaKnown RBP8.89□□□□□ -0.99
SMG1-210ENST00000565224 ANP32BQ92688 251 aaKnown RBP8.89□□□□□ -0.99
SMG1-210ENST00000565224 PPP1R9BQ96SB3 815 aa8.89□□□□□ -0.99
SMG1-210ENST00000565224 LMBRD1Q9NUN5 540 aa8.89□□□□□ -0.99
SMG1-210ENST00000565224 HTATSF1O43719 755 aaKnown RBP8.88□□□□□ -0.99
SMG1-210ENST00000565224 LTKP29376 864 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 SALL3Q9BXA9 1300 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 GNAI3P08754 354 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 AMPHP49418 695 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 FLIIQ13045 1269 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 EYA1Q99502 592 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 LRRCC1Q9C099 1032 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 EXOC6BQ9Y2D4 811 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 CEP170BQ9Y4F5 1589 aaPredicted RBP8.88□□□□□ -0.99
SMG1-210ENST00000565224 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
SMG1-210ENST00000565224 NCLP19338 710 aaKnown RBP8.87□□□□□ -0.99
SMG1-210ENST00000565224 MX1P20591 662 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 ZSCAN23Q3MJ62 389 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 CCDC30Q5VVM6 783 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 CAVIN1Q6NZI2 390 aaKnown RBP8.87□□□□□ -0.99
SMG1-210ENST00000565224 STRCQ7RTU9 1775 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 MCCP23508 829 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 MCM2P49736 904 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
SMG1-210ENST00000565224 ESYT1Q9BSJ8 1104 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 ZDHHC9Q9Y397 364 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 FMN2Q9NZ56 1722 aa8.87□□□□□ -0.99
SMG1-210ENST00000565224 SOS1Q07889 1333 aaPredicted RBP8.86□□□□□ -0.99
SMG1-210ENST00000565224 PRPF40AO75400 957 aaKnown RBP8.86□□□□□ -0.99
SMG1-210ENST00000565224 NEK4P51957 841 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 ATP8B2P98198 1209 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 TSHZ3Q63HK5 1081 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 NGDNQ8NEJ9 315 aaKnown RBP8.86□□□□□ -0.99
SMG1-210ENST00000565224 SLC26A8Q96RN1 970 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 GNAT3A8MTJ3 354 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 ANAPC15P60006 121 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 TMX3Q96JJ7 454 aa8.86□□□□□ -0.99
SMG1-210ENST00000565224 ZNF142P52746 1687 aaPredicted RBP8.86□□□□□ -0.99
SMG1-210ENST00000565224 PNMA6EA0A0J9YXQ4 647 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 STAP2Q9UGK3 403 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 AMOTL2Q9Y2J4 779 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 EID1Q9Y6B2 187 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 CHMLP26374 656 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 GPT2Q8TD30 523 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 BABAM1Q9NWV8 329 aa8.85□□□□□ -0.99
SMG1-210ENST00000565224 FAM208AQ9UK61 1670 aaKnown RBP8.85□□□□□ -0.99
SMG1-210ENST00000565224 PXDNLA1KZ92 1463 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 AOX1Q06278 1338 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 TRIM6-TRIM34B2RNG4 842 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 CUL4AQ13619 759 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 ZSCAN30Q86W11 494 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 RILPL2Q969X0 211 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 ANO2Q9NQ90 1003 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
SMG1-210ENST00000565224 MAP3K5Q99683 1374 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 DIP2AQ14689 1571 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 AK9Q5TCS8 1911 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 XRN1Q8IZH2 1706 aaKnown RBP8.84□□□□□ -0.99
SMG1-210ENST00000565224 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 IL17RAQ96F46 866 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 INTS4Q96HW7 963 aaKnown RBP8.84□□□□□ -0.99
SMG1-210ENST00000565224 PALD1Q9ULE6 856 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 TBX22Q9Y458 520 aa8.84□□□□□ -0.99
SMG1-210ENST00000565224 BRD1O95696 1058 aa8.83□□□□□ -1
SMG1-210ENST00000565224 MBD3O95983 291 aa8.83□□□□□ -1
SMG1-210ENST00000565224 UBTFL1P0CB47 393 aaPredicted RBP8.83□□□□□ -1
SMG1-210ENST00000565224 HOXC9P31274 260 aa8.83□□□□□ -1
SMG1-210ENST00000565224 PRIM1P49642 420 aaKnown RBP8.83□□□□□ -1
SMG1-210ENST00000565224 NLRP6P59044 892 aa8.83□□□□□ -1
SMG1-210ENST00000565224 TAF7Q15545 349 aaPredicted RBP8.83□□□□□ -1
SMG1-210ENST00000565224 RBSNQ9H1K0 784 aa8.83□□□□□ -1
SMG1-210ENST00000565224 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
SMG1-210ENST00000565224 PIK3C2AO00443 1686 aa8.83□□□□□ -1
SMG1-210ENST00000565224 EPB41L2O43491 1005 aaKnown RBP8.83□□□□□ -1
SMG1-210ENST00000565224 HS1BP3Q53T59 392 aa8.83□□□□□ -1
SMG1-210ENST00000565224 IL17REQ8NFR9 667 aa8.83□□□□□ -1
SMG1-210ENST00000565224 USP44Q9H0E7 712 aa8.83□□□□□ -1
SMG1-210ENST00000565224 NWD1Q149M9 1564 aa8.82□□□□□ -1
SMG1-210ENST00000565224 TUBGCP6Q96RT7 1819 aa8.82□□□□□ -1
SMG1-210ENST00000565224 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
SMG1-210ENST00000565224 LRSAM1Q6UWE0 723 aa8.82□□□□□ -1
SMG1-210ENST00000565224 SSH3Q8TE77 659 aa8.82□□□□□ -1
SMG1-210ENST00000565224 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
SMG1-210ENST00000565224 SLIT1O75093 1534 aa8.82□□□□□ -1
SMG1-210ENST00000565224 ANKARQ7Z5J8 1434 aa8.82□□□□□ -1
SMG1-210ENST00000565224 ARHGAP23Q9P227 1491 aa8.82□□□□□ -1
SMG1-210ENST00000565224 RAB11FIP3O75154 756 aa8.81□□□□□ -1
SMG1-210ENST00000565224 MSNP26038 577 aaKnown RBP8.81□□□□□ -1
SMG1-210ENST00000565224 HDGFL1Q5TGJ6 251 aa8.81□□□□□ -1
SMG1-210ENST00000565224 UNC5CLQ8IV45 518 aa8.81□□□□□ -1
SMG1-210ENST00000565224 CHAMP1Q96JM3 812 aa8.81□□□□□ -1
SMG1-210ENST00000565224 PDLIM2Q96JY6 352 aa8.81□□□□□ -1
SMG1-210ENST00000565224 TMEM63CQ9P1W3 806 aa8.81□□□□□ -1
SMG1-210ENST00000565224 N4BP2Q86UW6 1770 aaPredicted RBP8.81□□□□□ -1
SMG1-210ENST00000565224 SYCE3A1L190 88 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms