RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TMPRSS4Q9NRS4 437 aa4.27□□□□□ -1.73
CHD9-209ENST00000564255 ATAD2Q6PL18 1390 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 GGCXP38435 758 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 RAB15P59190 212 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 RNF166Q96A37 237 aaPredicted RBP4.26□□□□□ -1.73
CHD9-209ENST00000564255 MKNK1Q9BUB5 465 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 MAPK1P28482 360 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 MTFR1Q15390 333 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 RC3H1Q5TC82 1133 aaKnown RBP4.26□□□□□ -1.73
CHD9-209ENST00000564255 TNS4Q8IZW8 715 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 XAGE2Q96GT9 111 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 ETNK1Q9HBU6 452 aa4.26□□□□□ -1.73
CHD9-209ENST00000564255 GNRH1P01148 92 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 POTEAQ6S8J7 498 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 CYP2U1Q7Z449 544 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 GIPC2Q8TF65 315 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 SCG3Q8WXD2 468 aaKnown RBP4.25□□□□□ -1.73
CHD9-209ENST00000564255 IGSF3O75054 1194 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 RGL4Q8IZJ4 473 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 ZNF784Q8NCA9 323 aaPredicted RBP4.25□□□□□ -1.73
CHD9-209ENST00000564255 EHBP1Q8NDI1 1231 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 EMID1Q96A84 441 aaPredicted RBP4.25□□□□□ -1.73
CHD9-209ENST00000564255 CYLDQ9NQC7 956 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.25□□□□□ -1.73
CHD9-209ENST00000564255 HRH3Q9Y5N1 445 aa4.25□□□□□ -1.73
CHD9-209ENST00000564255 FAM13AO94988 1023 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 STAU1O95793 577 aaKnown RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 FSHRP23945 695 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 MYT1Q01538 1121 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 NR5A1Q13285 461 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 RBCK1Q9BYM8 510 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 ESF1Q9H501 851 aaKnown RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 ADH1CP00326 375 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 NAA30Q147X3 362 aaPredicted RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 ZNF326Q5BKZ1 582 aaKnown RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 ESCO1Q5FWF5 840 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 LIAT1Q6ZQX7 453 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 ZSCAN29Q8IWY8 852 aaPredicted RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 TSPAN10Q9H1Z9 355 aaPredicted RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 HCSTQ9UBK5 93 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 A0A1W2PRU2 124 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 CD2BP2O95400 341 aaKnown RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 ADD1P35611 737 aaKnown RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 SMTNP53814 917 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 MTMR3Q13615 1198 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 PPP1R18Q6NYC8 613 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 CCDC116Q8IYX3 515 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 C2orf49Q9BVC5 232 aaPredicted RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 SCHIP1Q9P0W5 487 aaPredicted RBP4.24□□□□□ -1.73
CHD9-209ENST00000564255 SERTAD1Q9UHV2 236 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 TLL2Q9Y6L7 1015 aa4.24□□□□□ -1.73
CHD9-209ENST00000564255 TNFRSF10BO14763 440 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 ARID5BQ14865 1188 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 PPP1R26Q5T8A7 1209 aaPredicted RBP4.23□□□□□ -1.73
CHD9-209ENST00000564255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.23□□□□□ -1.731e-6■■■■■ 73.5
CHD9-209ENST00000564255 A6NJY4 79 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 WNT7AO00755 349 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 CDK2AP1O14519 115 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 C16orf46Q6P387 395 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 SLC9A9Q8IVB4 645 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 MYO19Q96H55 970 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 SAP130Q9H0E3 1048 aa4.23□□□□□ -1.73
CHD9-209ENST00000564255 IL2RAP01589 272 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 MPSTP25325 297 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 CITED4Q96RK1 184 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 FZD6O60353 706 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 NR3C2P08235 984 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 TAGLNQ01995 201 aaKnown RBP4.22□□□□□ -1.73
CHD9-209ENST00000564255 FMR1Q06787 632 aaKnown RBP eCLIP4.22□□□□□ -1.73
CHD9-209ENST00000564255 COX20Q5RI15 118 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 TMC7Q7Z402 723 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 QTRT2Q9H974 415 aaKnown RBP4.22□□□□□ -1.73
CHD9-209ENST00000564255 PGPEP1Q9NXJ5 209 aa4.22□□□□□ -1.73
CHD9-209ENST00000564255 IQSEC3Q9UPP2 1182 aaPredicted RBP4.22□□□□□ -1.73
CHD9-209ENST00000564255 PPP1R12BO60237 982 aaPredicted RBP4.21□□□□□ -1.73
CHD9-209ENST00000564255 HIRAP54198 1017 aaPredicted RBP4.21□□□□□ -1.73
CHD9-209ENST00000564255 DSC3Q14574 896 aa4.21□□□□□ -1.73
CHD9-209ENST00000564255 VTI1AQ96AJ9 217 aa4.21□□□□□ -1.73
CHD9-209ENST00000564255 P4HBP07237 508 aaKnown RBP4.21□□□□□ -1.74
CHD9-209ENST00000564255 TEAD4Q15561 434 aa4.21□□□□□ -1.74
CHD9-209ENST00000564255 EAPPQ56P03 285 aaPredicted RBP4.21□□□□□ -1.74
CHD9-209ENST00000564255 ALKBH2Q6NS38 261 aa4.21□□□□□ -1.74
CHD9-209ENST00000564255 TREHO43280 583 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 IGHA2P01877 340 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 ADH1AP07327 375 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 PSMA6P60900 246 aaKnown RBP4.2□□□□□ -1.74
CHD9-209ENST00000564255 ZNF295-AS1Q8N0V1 137 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 KDF1Q8NAX2 398 aaPredicted RBP4.2□□□□□ -1.74
CHD9-209ENST00000564255 FAM129BQ96TA1 746 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 FHDC1Q9C0D6 1143 aaPredicted RBP4.2□□□□□ -1.74
CHD9-209ENST00000564255 EMILIN1Q9Y6C2 1016 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 USP3Q9Y6I4 520 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 RECKO95980 971 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 TCF3P15923 654 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 ESYT1Q9BSJ8 1104 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 STIM2Q9P246 746 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 NDUFB5O43674 189 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 TBCELQ5QJ74 424 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 IFFO2Q5TF58 517 aa4.2□□□□□ -1.74
CHD9-209ENST00000564255 ALKBH8Q96BT7 664 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms