RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 USP17L4A6NCW7 530 aa8.87□□□□□ -0.99
NAE1-211ENST00000563253 TMEM229AB2RXF0 380 aa8.87□□□□□ -0.99
NAE1-211ENST00000563253 GTF2E1P29083 439 aaPredicted RBP8.87□□□□□ -0.99
NAE1-211ENST00000563253 GTF2IP78347 998 aa8.87□□□□□ -0.99
NAE1-211ENST00000563253 GNASQ5JWF2 1037 aa8.87□□□□□ -0.99
NAE1-211ENST00000563253 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
NAE1-211ENST00000563253 USP17L1Q7RTZ2 530 aa8.87□□□□□ -0.99
NAE1-211ENST00000563253 TIMMDC1Q9NPL8 285 aa8.87□□□□□ -0.99
NAE1-211ENST00000563253 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
NAE1-211ENST00000563253 RHBDD1Q8TEB9 315 aa8.86□□□□□ -0.99
NAE1-211ENST00000563253 GAS2L1Q99501 681 aaPredicted RBP8.86□□□□□ -0.99
NAE1-211ENST00000563253 LORP23490 312 aaPredicted RBP8.85□□□□□ -0.99
NAE1-211ENST00000563253 PHKA2P46019 1235 aa8.85□□□□□ -0.99
NAE1-211ENST00000563253 KRT76Q01546 638 aa8.85□□□□□ -0.99
NAE1-211ENST00000563253 C4orf17Q53FE4 359 aa8.85□□□□□ -0.99
NAE1-211ENST00000563253 RIPOR1Q6ZS17 1223 aa8.85□□□□□ -0.99
NAE1-211ENST00000563253 TRIM22Q8IYM9 498 aa8.85□□□□□ -0.99
NAE1-211ENST00000563253 ZNF837Q96EG3 531 aaPredicted RBP8.85□□□□□ -0.99
NAE1-211ENST00000563253 GMCL1Q96IK5 515 aa8.85□□□□□ -0.99
NAE1-211ENST00000563253 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
NAE1-211ENST00000563253 COL25A1Q9BXS0 654 aaPredicted RBP8.85□□□□□ -0.99
NAE1-211ENST00000563253 SMTNP53814 917 aa8.84□□□□□ -0.99
NAE1-211ENST00000563253 PSME1Q06323 249 aa8.84□□□□□ -0.99
NAE1-211ENST00000563253 TRIM50Q86XT4 487 aa8.84□□□□□ -0.99
NAE1-211ENST00000563253 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
NAE1-211ENST00000563253 SLC4A9Q96Q91 983 aa8.84□□□□□ -0.99
NAE1-211ENST00000563253 SERTAD1Q9UHV2 236 aa8.84□□□□□ -0.99
NAE1-211ENST00000563253 A0A1B0GTH6 734 aa8.83□□□□□ -1
NAE1-211ENST00000563253 H7C1W4 665 aa8.83□□□□□ -1
NAE1-211ENST00000563253 F11P03951 625 aa8.83□□□□□ -1
NAE1-211ENST00000563253 DBN1Q16643 649 aa8.83□□□□□ -1
NAE1-211ENST00000563253 STK17AQ9UEE5 414 aa8.83□□□□□ -1
NAE1-211ENST00000563253 RNFT1Q5M7Z0 435 aa8.82□□□□□ -1
NAE1-211ENST00000563253 CNTNAP3BQ96NU0 1288 aa8.82□□□□□ -1
NAE1-211ENST00000563253 CNTNAP3Q9BZ76 1288 aa8.82□□□□□ -1
NAE1-211ENST00000563253 TFIP11Q9UBB9 837 aaKnown RBP8.82□□□□□ -1
NAE1-211ENST00000563253 A6NJY4 79 aa8.81□□□□□ -1
NAE1-211ENST00000563253 BACH1O14867 736 aa8.81□□□□□ -1
NAE1-211ENST00000563253 ATP1A2P50993 1020 aa8.81□□□□□ -1
NAE1-211ENST00000563253 MTFR1Q15390 333 aa8.81□□□□□ -1
NAE1-211ENST00000563253 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.81□□□□□ -1
NAE1-211ENST00000563253 GPAMQ9HCL2 828 aa8.81□□□□□ -1
NAE1-211ENST00000563253 ZNF358Q9NW07 568 aa8.81□□□□□ -1
NAE1-211ENST00000563253 MKRN1Q9UHC7 482 aaKnown RBP8.81□□□□□ -1
NAE1-211ENST00000563253 KIAA1024Q9UPX6 916 aa8.81□□□□□ -1
NAE1-211ENST00000563253 MAFBQ9Y5Q3 323 aaPredicted RBP8.81□□□□□ -1
NAE1-211ENST00000563253 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
NAE1-211ENST00000563253 PLA2G4AP47712 749 aa8.8□□□□□ -1
NAE1-211ENST00000563253 CLDN10P78369 228 aa8.8□□□□□ -1
NAE1-211ENST00000563253 TPCN2Q8NHX9 752 aa8.8□□□□□ -1
NAE1-211ENST00000563253 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
NAE1-211ENST00000563253 IQSEC3Q9UPP2 1182 aaPredicted RBP8.8□□□□□ -1
NAE1-211ENST00000563253 CDK2AP1O14519 115 aa8.79□□□□□ -1
NAE1-211ENST00000563253 ZBTB7BO15156 539 aaPredicted RBP8.79□□□□□ -1
NAE1-211ENST00000563253 OGFOD1Q8N543 542 aa8.79□□□□□ -1
NAE1-211ENST00000563253 GTPBP3Q969Y2 492 aaKnown RBP8.79□□□□□ -1
NAE1-211ENST00000563253 NIFKQ9BYG3 293 aaKnown RBP8.79□□□□□ -1
NAE1-211ENST00000563253 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
NAE1-211ENST00000563253 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
NAE1-211ENST00000563253 ZNF777Q9ULD5 760 aaPredicted RBP8.79□□□□□ -1
NAE1-211ENST00000563253 USP3Q9Y6I4 520 aa8.79□□□□□ -1
NAE1-211ENST00000563253 GPR25O00155 361 aa8.78□□□□□ -1
NAE1-211ENST00000563253 GAS6Q14393 721 aa8.78□□□□□ -1
NAE1-211ENST00000563253 CCDC102BQ68D86 513 aa8.78□□□□□ -1
NAE1-211ENST00000563253 FOXR1Q6PIV2 292 aa8.78□□□□□ -1
NAE1-211ENST00000563253 ZNF295-AS1Q8N0V1 137 aa8.78□□□□□ -1
NAE1-211ENST00000563253 THBS1P07996 1170 aa8.77□□□□□ -1.01
NAE1-211ENST00000563253 MSX1P28360 303 aa8.77□□□□□ -1.01
NAE1-211ENST00000563253 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
NAE1-211ENST00000563253 RUBCNLQ9H714 662 aa8.77□□□□□ -1.01
NAE1-211ENST00000563253 SCHIP1Q9P0W5 487 aaPredicted RBP8.77□□□□□ -1.01
NAE1-211ENST00000563253 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
NAE1-211ENST00000563253 CSB-PGBD3P0DP91 1061 aa8.76□□□□□ -1.01
NAE1-211ENST00000563253 EPHA4P54764 986 aa8.76□□□□□ -1.01
NAE1-211ENST00000563253 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
NAE1-211ENST00000563253 SIX5Q8N196 739 aa8.76□□□□□ -1.01
NAE1-211ENST00000563253 PGBD3Q8N328 593 aa8.76□□□□□ -1.01
NAE1-211ENST00000563253 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
NAE1-211ENST00000563253 GTF3C3Q9Y5Q9 886 aa8.76□□□□□ -1.01
NAE1-211ENST00000563253 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
NAE1-211ENST00000563253 FOXK2Q01167 660 aa8.75□□□□□ -1.01
NAE1-211ENST00000563253 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
NAE1-211ENST00000563253 TRERF1Q96PN7 1200 aa8.75□□□□□ -1.01
NAE1-211ENST00000563253 CABP1Q9NZU7 370 aa8.75□□□□□ -1.01
NAE1-211ENST00000563253 ATP4AP20648 1035 aa8.74□□□□□ -1.01
NAE1-211ENST00000563253 RASA1P20936 1047 aa8.74□□□□□ -1.01
NAE1-211ENST00000563253 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
NAE1-211ENST00000563253 TNS4Q8IZW8 715 aa8.74□□□□□ -1.01
NAE1-211ENST00000563253 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
NAE1-211ENST00000563253 CRISPLD1Q9H336 500 aa8.74□□□□□ -1.01
NAE1-211ENST00000563253 M0R2N6 131 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 DKK1O94907 266 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 ADAMTS2O95450 1211 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 LMOD1P29536 600 aaPredicted RBP8.73□□□□□ -1.01
NAE1-211ENST00000563253 NBPF1Q3BBV0 1214 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 EFHC2Q5JST6 749 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 SLC9A9Q8IVB4 645 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 ZMYND15Q9H091 742 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 MBIPQ9NS73 344 aa8.73□□□□□ -1.01
NAE1-211ENST00000563253 RBM19Q9Y4C8 960 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms