RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
HERC1-215ENST00000561436 NOD1Q9Y239 953 aa6.93□□□□□ -1.3
HERC1-215ENST00000561436 MAFBQ9Y5Q3 323 aaPredicted RBP6.93□□□□□ -1.3
HERC1-215ENST00000561436 CDC14CA4D256 554 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 INHAP05111 366 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 RFX1P22670 979 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 TBCELQ5QJ74 424 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 NBPF10Q6P3W6 841 aaKnown RBP6.92□□□□□ -1.3
HERC1-215ENST00000561436 NBPF15Q8N660 670 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 GPR161Q8N6U8 529 aaKnown RBP6.92□□□□□ -1.3
HERC1-215ENST00000561436 NFATC2IPQ8NCF5 419 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 ZSCAN10Q96SZ4 725 aaPredicted RBP6.92□□□□□ -1.3
HERC1-215ENST00000561436 GAS2L1Q99501 681 aaPredicted RBP6.92□□□□□ -1.3
HERC1-215ENST00000561436 PPP1R12CQ9BZL4 782 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
HERC1-215ENST00000561436 SERPINA10Q9UK55 444 aa6.92□□□□□ -1.3
HERC1-215ENST00000561436 LMOD1P29536 600 aaPredicted RBP6.91□□□□□ -1.3
HERC1-215ENST00000561436 TMEM214Q6NUQ4 689 aaKnown RBP6.91□□□□□ -1.3
HERC1-215ENST00000561436 RIPOR1Q6ZS17 1223 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 VWA5B2Q8N398 1253 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 OGFOD1Q8N543 542 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 TPCN2Q8NHX9 752 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 GAS2L2Q8NHY3 880 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 SIRT1Q96EB6 747 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 ZNF358Q9NW07 568 aa6.91□□□□□ -1.3
HERC1-215ENST00000561436 WASLO00401 505 aaPredicted RBP6.9□□□□□ -1.3
HERC1-215ENST00000561436 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
HERC1-215ENST00000561436 ITGA6P23229 1130 aa6.9□□□□□ -1.3
HERC1-215ENST00000561436 GPC1P35052 558 aa6.9□□□□□ -1.3
HERC1-215ENST00000561436 C4orf17Q53FE4 359 aa6.9□□□□□ -1.3
HERC1-215ENST00000561436 ESCO1Q5FWF5 840 aa6.9□□□□□ -1.3
HERC1-215ENST00000561436 PLEKHM2Q8IWE5 1019 aa6.9□□□□□ -1.3
HERC1-215ENST00000561436 CCDC82Q8N4S0 544 aa6.9□□□□□ -1.3
HERC1-215ENST00000561436 PARP3Q9Y6F1 533 aa6.9□□□□□ -1.3
HERC1-215ENST00000561436 SFI1A8K8P3 1242 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 GPR25O00155 361 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 PLA2G4AP47712 749 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
HERC1-215ENST00000561436 CFAP70Q5T0N1 1121 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 TNS4Q8IZW8 715 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 TRIM52Q96A61 297 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 C1orf115Q9H7X2 142 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 TIMMDC1Q9NPL8 285 aa6.89□□□□□ -1.31
HERC1-215ENST00000561436 KRT76Q01546 638 aa6.88□□□□□ -1.31
HERC1-215ENST00000561436 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
HERC1-215ENST00000561436 TAS1R3Q7RTX0 852 aa6.88□□□□□ -1.31
HERC1-215ENST00000561436 IRF7Q92985 503 aa6.88□□□□□ -1.31
HERC1-215ENST00000561436 DNAAF2Q9NVR5 837 aaKnown RBP6.88□□□□□ -1.31
HERC1-215ENST00000561436 SPATA31C2B4DYI2 1134 aa6.87□□□□□ -1.31
HERC1-215ENST00000561436 RASA1P20936 1047 aa6.87□□□□□ -1.31
HERC1-215ENST00000561436 SMTNP53814 917 aa6.87□□□□□ -1.31
HERC1-215ENST00000561436 DBN1Q16643 649 aa6.87□□□□□ -1.31
HERC1-215ENST00000561436 RNFT1Q5M7Z0 435 aa6.87□□□□□ -1.31
HERC1-215ENST00000561436 SH3PXD2AQ5TCZ1 1133 aa6.87□□□□□ -1.31
HERC1-215ENST00000561436 TSEN2Q8NCE0 465 aaKnown RBP6.87□□□□□ -1.31
HERC1-215ENST00000561436 ABCC9O60706 1549 aa6.86□□□□□ -1.31
HERC1-215ENST00000561436 DKK1O94907 266 aa6.86□□□□□ -1.31
HERC1-215ENST00000561436 THBS1P07996 1170 aa6.86□□□□□ -1.31
HERC1-215ENST00000561436 GNASQ5JWF2 1037 aa6.86□□□□□ -1.31
HERC1-215ENST00000561436 KANK4Q5T7N3 995 aaPredicted RBP6.86□□□□□ -1.31
HERC1-215ENST00000561436 PPARGC1BQ86YN6 1023 aaKnown RBP6.86□□□□□ -1.31
HERC1-215ENST00000561436 NPAS3Q8IXF0 933 aa6.86□□□□□ -1.31
HERC1-215ENST00000561436 ZNF837Q96EG3 531 aaPredicted RBP6.86□□□□□ -1.31
HERC1-215ENST00000561436 RUBCNLQ9H714 662 aa6.86□□□□□ -1.31
HERC1-215ENST00000561436 A6NJY4 79 aa6.85□□□□□ -1.31
HERC1-215ENST00000561436 VSIG8P0DPA2 414 aa6.85□□□□□ -1.31
HERC1-215ENST00000561436 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
HERC1-215ENST00000561436 AIDAQ96BJ3 306 aa6.85□□□□□ -1.31
HERC1-215ENST00000561436 KLRG1Q96E93 195 aa6.85□□□□□ -1.31
HERC1-215ENST00000561436 CNTNAP3BQ96NU0 1288 aa6.85□□□□□ -1.31
HERC1-215ENST00000561436 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
HERC1-215ENST00000561436 CNTNAP3Q9BZ76 1288 aa6.85□□□□□ -1.31
HERC1-215ENST00000561436 IQSEC3Q9UPP2 1182 aaPredicted RBP6.85□□□□□ -1.31
HERC1-215ENST00000561436 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
HERC1-215ENST00000561436 LZTS3O60299 673 aaPredicted RBP6.84□□□□□ -1.31
HERC1-215ENST00000561436 MSX1P28360 303 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 GTF2E1P29083 439 aaPredicted RBP6.84□□□□□ -1.31
HERC1-215ENST00000561436 EPHA4P54764 986 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 SLC9A9Q8IVB4 645 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 ZNF295-AS1Q8N0V1 137 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 RHBDD1Q8TEB9 315 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 ZDHHC1Q8WTX9 485 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 GTPBP3Q969Y2 492 aaKnown RBP6.84□□□□□ -1.31
HERC1-215ENST00000561436 TSPAN10Q9H1Z9 355 aaPredicted RBP6.84□□□□□ -1.31
HERC1-215ENST00000561436 CABP1Q9NZU7 370 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 DYRK1BQ9Y463 629 aa6.84□□□□□ -1.31
HERC1-215ENST00000561436 USP17L15C9J2P7 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L10C9JJH3 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L13C9JLJ4 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L12C9JPN9 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L11C9JVI0 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L21D6R901 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L18D6R9N7 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L22D6RA61 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L17D6RBQ6 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L19D6RCP7 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 USP17L20D6RJB6 530 aa6.83□□□□□ -1.32
HERC1-215ENST00000561436 TXLNAP40222 546 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms