RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 CLN3Q13286 438 aa9.54□□□□□ -0.88
HIF1A-210ENST00000557206 KDF1Q8NAX2 398 aaPredicted RBP9.54□□□□□ -0.88
HIF1A-210ENST00000557206 HINFPQ9BQA5 517 aa9.54□□□□□ -0.88
HIF1A-210ENST00000557206 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
HIF1A-210ENST00000557206 POLMQ9NP87 494 aaPredicted RBP9.54□□□□□ -0.88
HIF1A-210ENST00000557206 TMEM229AB2RXF0 380 aa9.53□□□□□ -0.88
HIF1A-210ENST00000557206 WASLO00401 505 aaPredicted RBP9.53□□□□□ -0.88
HIF1A-210ENST00000557206 XAGE2Q96GT9 111 aa9.53□□□□□ -0.88
HIF1A-210ENST00000557206 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
HIF1A-210ENST00000557206 ZNF358Q9NW07 568 aa9.53□□□□□ -0.88
HIF1A-210ENST00000557206 SPINT1O43278 529 aa9.52□□□□□ -0.89
HIF1A-210ENST00000557206 IL2RAP01589 272 aa9.52□□□□□ -0.89
HIF1A-210ENST00000557206 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
HIF1A-210ENST00000557206 ZMIZ1Q9ULJ6 1067 aa9.52□□□□□ -0.89
HIF1A-210ENST00000557206 M0R2N6 131 aa9.51□□□□□ -0.89
HIF1A-210ENST00000557206 TLR1Q15399 786 aa9.51□□□□□ -0.89
HIF1A-210ENST00000557206 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
HIF1A-210ENST00000557206 STK32AQ8WU08 396 aa9.51□□□□□ -0.89
HIF1A-210ENST00000557206 ZFP42Q96MM3 310 aa9.51□□□□□ -0.89
HIF1A-210ENST00000557206 ARXQ96QS3 562 aa9.51□□□□□ -0.89
HIF1A-210ENST00000557206 ATP13A2Q9NQ11 1180 aa9.51□□□□□ -0.89
HIF1A-210ENST00000557206 SMTNP53814 917 aa9.5□□□□□ -0.89
HIF1A-210ENST00000557206 CENPCQ03188 943 aa9.5□□□□□ -0.89
HIF1A-210ENST00000557206 TMEM164Q5U3C3 297 aa9.5□□□□□ -0.89
HIF1A-210ENST00000557206 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
HIF1A-210ENST00000557206 HOMEZQ8IX15 550 aa9.5□□□□□ -0.89
HIF1A-210ENST00000557206 DKK1O94907 266 aa9.49□□□□□ -0.89
HIF1A-210ENST00000557206 GPC1P35052 558 aa9.49□□□□□ -0.89
HIF1A-210ENST00000557206 TSEN2Q8NCE0 465 aaKnown RBP9.49□□□□□ -0.89
HIF1A-210ENST00000557206 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
HIF1A-210ENST00000557206 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
HIF1A-210ENST00000557206 USTQ9Y2C2 406 aa9.49□□□□□ -0.89
HIF1A-210ENST00000557206 A6NJY4 79 aa9.48□□□□□ -0.89
HIF1A-210ENST00000557206 TTLL8A6PVC2 850 aa9.48□□□□□ -0.89
HIF1A-210ENST00000557206 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
HIF1A-210ENST00000557206 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
HIF1A-210ENST00000557206 SWI5Q1ZZU3 235 aa9.48□□□□□ -0.89
HIF1A-210ENST00000557206 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
HIF1A-210ENST00000557206 TNS4Q8IZW8 715 aa9.48□□□□□ -0.89
HIF1A-210ENST00000557206 SENP2Q9HC62 589 aa9.48□□□□□ -0.89
HIF1A-210ENST00000557206 DACH1Q9UI36 760 aa9.48□□□□□ -0.89
HIF1A-210ENST00000557206 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
HIF1A-210ENST00000557206 KIFC2Q96AC6 838 aa9.46□□□□□ -0.9
HIF1A-210ENST00000557206 CHMP3Q9Y3E7 222 aa9.46□□□□□ -0.9
HIF1A-210ENST00000557206 FIGNL2A6NMB9 653 aa9.45□□□□□ -0.9
HIF1A-210ENST00000557206 MAN1A2O60476 641 aa9.45□□□□□ -0.9
HIF1A-210ENST00000557206 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
HIF1A-210ENST00000557206 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
HIF1A-210ENST00000557206 LYSMD3Q7Z3D4 306 aa9.45□□□□□ -0.9
HIF1A-210ENST00000557206 HRH3Q9Y5N1 445 aa9.45□□□□□ -0.9
HIF1A-210ENST00000557206 POTECB2RU33 542 aa9.44□□□□□ -0.9
HIF1A-210ENST00000557206 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
HIF1A-210ENST00000557206 LGR5O75473 907 aa9.44□□□□□ -0.9
HIF1A-210ENST00000557206 MTFR1Q15390 333 aa9.44□□□□□ -0.9
HIF1A-210ENST00000557206 FOXD4L5Q5VV16 416 aaPredicted RBP9.44□□□□□ -0.9
HIF1A-210ENST00000557206 PRICKLE2Q7Z3G6 844 aa9.44□□□□□ -0.9
HIF1A-210ENST00000557206 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
HIF1A-210ENST00000557206 GRIP2Q9C0E4 1043 aa9.44□□□□□ -0.9
HIF1A-210ENST00000557206 SOS2Q07890 1332 aaPredicted RBP9.44□□□□□ -0.9
HIF1A-210ENST00000557206 TMEM88BA6NKF7 163 aa9.43□□□□□ -0.9
HIF1A-210ENST00000557206 PRMT3O60678 531 aa9.43□□□□□ -0.9
HIF1A-210ENST00000557206 SCG3Q8WXD2 468 aaKnown RBP9.43□□□□□ -0.9
HIF1A-210ENST00000557206 FHDC1Q9C0D6 1143 aaPredicted RBP9.43□□□□□ -0.9
HIF1A-210ENST00000557206 CABP1Q9NZU7 370 aa9.43□□□□□ -0.9
HIF1A-210ENST00000557206 SCHIP1Q9P0W5 487 aaPredicted RBP9.43□□□□□ -0.9
HIF1A-210ENST00000557206 CARNS1A5YM72 827 aa9.42□□□□□ -0.9
HIF1A-210ENST00000557206 FAM69CQ0P6D2 419 aa9.42□□□□□ -0.9
HIF1A-210ENST00000557206 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.42□□□□□ -0.9
HIF1A-210ENST00000557206 TBCELQ5QJ74 424 aa9.42□□□□□ -0.9
HIF1A-210ENST00000557206 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
HIF1A-210ENST00000557206 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
HIF1A-210ENST00000557206 RHBDD1Q8TEB9 315 aa9.42□□□□□ -0.9
HIF1A-210ENST00000557206 CHMP7Q8WUX9 453 aaPredicted RBP9.42□□□□□ -0.9
HIF1A-210ENST00000557206 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
HIF1A-210ENST00000557206 NIFKQ9BYG3 293 aaKnown RBP9.42□□□□□ -0.9
HIF1A-210ENST00000557206 TSPAN10Q9H1Z9 355 aaPredicted RBP9.42□□□□□ -0.9
HIF1A-210ENST00000557206 GMPR2Q9P2T1 348 aaKnown RBP9.42□□□□□ -0.9
HIF1A-210ENST00000557206 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
HIF1A-210ENST00000557206 EPHA4P54764 986 aa9.41□□□□□ -0.9
HIF1A-210ENST00000557206 B4GALNT3Q6L9W6 998 aa9.41□□□□□ -0.9
HIF1A-210ENST00000557206 TAS1R3Q7RTX0 852 aa9.41□□□□□ -0.9
HIF1A-210ENST00000557206 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
HIF1A-210ENST00000557206 PRIMPOLQ96LW4 560 aa9.41□□□□□ -0.9
HIF1A-210ENST00000557206 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
HIF1A-210ENST00000557206 PPP1R12BO60237 982 aaPredicted RBP9.4□□□□□ -0.9
HIF1A-210ENST00000557206 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
HIF1A-210ENST00000557206 POU4F2Q12837 409 aa9.4□□□□□ -0.9
HIF1A-210ENST00000557206 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
HIF1A-210ENST00000557206 ZNF232Q9UNY5 417 aa9.4□□□□□ -0.9
HIF1A-210ENST00000557206 IGFBP4P22692 258 aa9.39□□□□□ -0.91
HIF1A-210ENST00000557206 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
HIF1A-210ENST00000557206 FOXK2Q01167 660 aa9.39□□□□□ -0.91
HIF1A-210ENST00000557206 TRIM47Q96LD4 638 aa9.39□□□□□ -0.91
HIF1A-210ENST00000557206 DNMT3LQ9UJW3 386 aa9.39□□□□□ -0.91
HIF1A-210ENST00000557206 SPATA31C2B4DYI2 1134 aa9.38□□□□□ -0.91
HIF1A-210ENST00000557206 WEE1P30291 646 aa9.38□□□□□ -0.91
HIF1A-210ENST00000557206 PHKA2P46019 1235 aa9.38□□□□□ -0.91
HIF1A-210ENST00000557206 AIDAQ96BJ3 306 aa9.38□□□□□ -0.91
HIF1A-210ENST00000557206 IQSEC3Q9UPP2 1182 aaPredicted RBP9.38□□□□□ -0.91
HIF1A-210ENST00000557206 SERTM1A2A2V5 107 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms