RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-210	ENST00000555718	WIPF1	O43516	503 aa		11.26	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	TLR1	Q15399	786 aa		11.26	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	SERTAD1	Q9UHV2	236 aa		11.26	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	PHKA2	P46019	1235 aa		11.25	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	CLDN10	P78369	228 aa		11.25	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.25	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.25	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	USP3	Q9Y6I4	520 aa		11.25	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	PALM3	A6NDB9	673 aa	Predicted RBP	11.24	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	SUPT5H	O00267	1087 aa	Known RBP	11.24	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	WASL	O00401	505 aa	Predicted RBP	11.24	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	VWA5B2	Q8N398	1253 aa		11.24	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	LZTS3	O60299	673 aa	Predicted RBP	11.23	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	C4orf17	Q53FE4	359 aa		11.23	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	TAS1R3	Q7RTX0	852 aa		11.23	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	PPP1R12C	Q9BZL4	782 aa		11.23	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	CDC14C	A4D256	554 aa		11.22	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	ZBTB7B	O15156	539 aa	Predicted RBP	11.22	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	KRT76	Q01546	638 aa		11.22	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	PSME1	Q06323	249 aa		11.22	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	NANOS1	Q8WY41	292 aa	Known RBP	11.22	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	TMEM214	Q6NUQ4	689 aa	Known RBP	11.21	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.21	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	TIMMDC1	Q9NPL8	285 aa		11.21	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	ZNF358	Q9NW07	568 aa		11.21	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	MKRN1	Q9UHC7	482 aa	Known RBP	11.21	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	DYRK1B	Q9Y463	629 aa		11.21	□□□□□ -0.61
PPP4R3A-210	ENST00000555718	SMTN	P53814	917 aa		11.2	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	ZNF295-AS1	Q8N0V1	137 aa		11.2	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	SLC4A9	Q96Q91	983 aa		11.2	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	GAS2L1	Q99501	681 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	THBS1	P07996	1170 aa		11.19	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	LOR	P23490	312 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	DBN1	Q16643	649 aa		11.19	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	RNFT1	Q5M7Z0	435 aa		11.19	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	OGFOD1	Q8N543	542 aa		11.19	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	TPCN2	Q8NHX9	752 aa		11.19	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	DKK1	O94907	266 aa		11.18	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	WDR44	Q5JSH3	913 aa		11.18	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	GNAS	Q5JWF2	1037 aa		11.18	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	RIPOR1	Q6ZS17	1223 aa		11.18	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	ZNF837	Q96EG3	531 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	ZNF594	Q96JF6	807 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	GPAM	Q9HCL2	828 aa		11.18	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	MTFR1	Q15390	333 aa		11.17	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	CFAP70	Q5T0N1	1121 aa		11.17	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	CCDC102B	Q68D86	513 aa		11.17	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	TRIM50	Q86XT4	487 aa		11.17	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	RHBDD1	Q8TEB9	315 aa		11.17	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	CCDC97	Q96F63	343 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	DNAAF2	Q9NVR5	837 aa	Known RBP	11.17	□□□□□ -0.62
PPP4R3A-210	ENST00000555718		A6NJY4	79 aa		11.16	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	PLA2G4A	P47712	749 aa		11.16	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	EPHA4	P54764	986 aa		11.16	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	SV2A	Q7L0J3	742 aa		11.16	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	ARID3C	A6NKF2	412 aa		11.15	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	LMOD1	P29536	600 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	KANK4	Q5T7N3	995 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	TRIM22	Q8IYM9	498 aa		11.15	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	TNS4	Q8IZW8	715 aa		11.15	□□□□□ -0.62
PPP4R3A-210	ENST00000555718	GPR25	O00155	361 aa		11.14	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	F11	P03951	625 aa		11.14	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	CRTC2	Q53ET0	693 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	TBCEL	Q5QJ74	424 aa		11.14	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	SERPINA10	Q9UK55	444 aa		11.14	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	SFI1	A8K8P3	1242 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	RASA1	P20936	1047 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	MSX1	P28360	303 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	GTF2E1	P29083	439 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	ATP1A2	P50993	1020 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	GAS6	Q14393	721 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	CNTNAP3B	Q96NU0	1288 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	CNTNAP3	Q9BZ76	1288 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	PARP3	Q9Y6F1	533 aa		11.13	□□□□□ -0.63
PPP4R3A-210	ENST00000555718		A0A1B0GTH6	734 aa		11.12	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	CDK2AP1	O14519	115 aa		11.12	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	FOXK2	Q01167	660 aa		11.12	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	SIX5	Q8N196	739 aa		11.12	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	LARGE2	Q8N3Y3	721 aa		11.12	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	GTPBP3	Q969Y2	492 aa	Known RBP	11.12	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	RUBCNL	Q9H714	662 aa		11.12	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	ATP4A	P20648	1035 aa		11.11	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	ZDHHC1	Q8WTX9	485 aa		11.11	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	NIFK	Q9BYG3	293 aa	Known RBP	11.11	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	BACH1	O14867	736 aa		11.1	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	TSEN2	Q8NCE0	465 aa	Known RBP	11.1	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	INSM1	Q01101	510 aa	Predicted RBP	11.09	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	PTK7	Q13308	1070 aa		11.09	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	UBAP2L	Q14157	1087 aa	Known RBP	11.09	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	CDCA8	Q53HL2	280 aa		11.09	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	SLC9A9	Q8IVB4	645 aa		11.09	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	CCDC82	Q8N4S0	544 aa		11.09	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	NUCKS1	Q9H1E3	243 aa	Known RBP	11.09	□□□□□ -0.63
PPP4R3A-210	ENST00000555718	LGR5	O75473	907 aa		11.08	□□□□□ -0.64
PPP4R3A-210	ENST00000555718	RFX1	P22670	979 aa		11.08	□□□□□ -0.64
PPP4R3A-210	ENST00000555718	SH3PXD2A	Q5TCZ1	1133 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms