RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 TATP17735 454 aaPredicted RBP10.81□□□□□ -0.68
CCNK-203ENST00000553865 DUSP27Q5VZP5 1158 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 PDILTQ8N807 584 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 TESK2Q96S53 571 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 SPG7Q9UQ90 795 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 ZFYVE27Q5T4F4 411 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 AEBP1Q8IUX7 1158 aa10.8□□□□□ -0.68
CCNK-203ENST00000553865 TSPY26PQ9H489 355 aa10.8□□□□□ -0.68
CCNK-203ENST00000553865 KDM6BO15054 1643 aa10.8□□□□□ -0.68
CCNK-203ENST00000553865 RRS1Q15050 365 aaKnown RBP10.8□□□□□ -0.68
CCNK-203ENST00000553865 PRPF40AO75400 957 aaKnown RBP10.8□□□□□ -0.68
CCNK-203ENST00000553865 ANKRD1Q15327 319 aa10.8□□□□□ -0.68
CCNK-203ENST00000553865 ERVK-7P63135 1459 aa10.8□□□□□ -0.68
CCNK-203ENST00000553865 SKIDA1Q1XH10 827 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 CADPS2Q86UW7 1296 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 SPHKAPQ2M3C7 1700 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 WDR33Q9C0J8 1336 aaKnown RBP10.79□□□□□ -0.68
CCNK-203ENST00000553865 EIF3JO75822 258 aaKnown RBP10.79□□□□□ -0.68
CCNK-203ENST00000553865 DHX8Q14562 1220 aaKnown RBP10.79□□□□□ -0.68
CCNK-203ENST00000553865 AMOTQ4VCS5 1084 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
CCNK-203ENST00000553865 GIMAP7Q8NHV1 300 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 TMEM2Q9UHN6 1383 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 EZRP15311 586 aaKnown RBP10.79□□□□□ -0.68
CCNK-203ENST00000553865 EPS15P42566 896 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 SMARCE1Q969G3 411 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 FBXW7Q969H0 707 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 CYP46A1Q9Y6A2 500 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 YEATS2Q9ULM3 1422 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 PPIP5K1Q6PFW1 1433 aa10.79□□□□□ -0.68
CCNK-203ENST00000553865 C20orf194Q5TEA3 1177 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 SSH1Q8WYL5 1049 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 KDM5CP41229 1560 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 ERLIN1O75477 346 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 AEBP2Q6ZN18 517 aaPredicted RBP10.78□□□□□ -0.68
CCNK-203ENST00000553865 BCL11BQ9C0K0 894 aaPredicted RBP10.78□□□□□ -0.68
CCNK-203ENST00000553865 SYNMO15061 1565 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
CCNK-203ENST00000553865 WAPLQ7Z5K2 1190 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 MCM4P33991 863 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 AGLP35573 1532 aa10.78□□□□□ -0.68
CCNK-203ENST00000553865 GNAT3A8MTJ3 354 aa10.77□□□□□ -0.68
CCNK-203ENST00000553865 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.68
CCNK-203ENST00000553865 RBM10P98175 930 aaKnown RBP10.77□□□□□ -0.68
CCNK-203ENST00000553865 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.68
CCNK-203ENST00000553865 KIF6Q6ZMV9 814 aa10.77□□□□□ -0.68
CCNK-203ENST00000553865 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.68
CCNK-203ENST00000553865 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
CCNK-203ENST00000553865 TRIM5Q9C035 493 aa10.77□□□□□ -0.69
CCNK-203ENST00000553865 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCNK-203ENST00000553865 LAMC1P11047 1609 aa10.77□□□□□ -0.69
CCNK-203ENST00000553865 MSH6P52701 1360 aa10.77□□□□□ -0.69
CCNK-203ENST00000553865 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
CCNK-203ENST00000553865 CCDC27Q2M243 656 aa10.77□□□□□ -0.69
CCNK-203ENST00000553865 ZNF396Q96N95 335 aaPredicted RBP10.77□□□□□ -0.69
CCNK-203ENST00000553865 RRP9O43818 475 aaKnown RBP10.76□□□□□ -0.69
CCNK-203ENST00000553865 EDC4Q6P2E9 1401 aaKnown RBP10.76□□□□□ -0.69
CCNK-203ENST00000553865 TTLL5Q6EMB2 1281 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 PIK3R4Q99570 1358 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 ZSCAN31Q96LW9 406 aaPredicted RBP10.76□□□□□ -0.69
CCNK-203ENST00000553865 SDF4Q9BRK5 362 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 PIP4K2AP48426 406 aaPredicted RBP10.76□□□□□ -0.69
CCNK-203ENST00000553865 ENOX2Q16206 610 aaKnown RBP10.76□□□□□ -0.69
CCNK-203ENST00000553865 FILIP1LQ4L180 1135 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 RIMBP3CA6NJZ7 1639 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 RIMBP3BA6NNM3 1639 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 RIMBP3Q9UFD9 1639 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 ANKRD62A6NC57 917 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 CCDC158Q5M9N0 1113 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 RNF214Q8ND24 703 aa10.76□□□□□ -0.69
CCNK-203ENST00000553865 SRGAP3O43295 1099 aa10.75□□□□□ -0.69
CCNK-203ENST00000553865 KINO60870 393 aaKnown RBP10.75□□□□□ -0.69
CCNK-203ENST00000553865 FOSBP53539 338 aa10.75□□□□□ -0.69
CCNK-203ENST00000553865 NEURL4Q96JN8 1562 aa10.75□□□□□ -0.69
CCNK-203ENST00000553865 GRPEL1Q9HAV7 217 aa10.75□□□□□ -0.69
CCNK-203ENST00000553865 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
CCNK-203ENST00000553865 BTBD11A6QL63 1104 aa10.75□□□□□ -0.69
CCNK-203ENST00000553865 BRPF3Q9ULD4 1205 aa10.75□□□□□ -0.69
CCNK-203ENST00000553865 CABP4P57796 275 aa10.74□□□□□ -0.69
CCNK-203ENST00000553865 CEBPAP49715 358 aaPredicted RBP10.74□□□□□ -0.69
CCNK-203ENST00000553865 GNL3LQ9NVN8 582 aaKnown RBP10.74□□□□□ -0.69
CCNK-203ENST00000553865 RNF17Q9BXT8 1623 aaKnown RBP10.74□□□□□ -0.69
CCNK-203ENST00000553865 MAP3K4Q9Y6R4 1608 aa10.74□□□□□ -0.69
CCNK-203ENST00000553865 TXLNAP40222 546 aa10.74□□□□□ -0.69
CCNK-203ENST00000553865 CCDC112Q8NEF3 446 aa10.74□□□□□ -0.69
CCNK-203ENST00000553865 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCNK-203ENST00000553865 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
CCNK-203ENST00000553865 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
CCNK-203ENST00000553865 PLA2R1Q13018 1463 aa10.74□□□□□ -0.69
CCNK-203ENST00000553865 FIBPO43427 364 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 SMC2O95347 1197 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 JMYQ8N9B5 988 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 FAM135BQ49AJ0 1406 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 PTPRCP08575 1304 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 SETBP1Q9Y6X0 1596 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 ZMYM4Q5VZL5 1548 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 ACEP12821 1306 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 KRT85P78386 507 aa10.73□□□□□ -0.69
CCNK-203ENST00000553865 KRT32Q14532 448 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms