RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 EML3Q32P44 896 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 C4orf17Q53FE4 359 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 ESCO1Q5FWF5 840 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 USP17L2Q6R6M4 530 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 TAS1R3Q7RTX0 852 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 USP17L1Q7RTZ2 530 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 PPARGC1BQ86YN6 1023 aaKnown RBP4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 SLC4A9Q96Q91 983 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 ZSCAN10Q96SZ4 725 aaPredicted RBP4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 USP3Q9Y6I4 520 aa4.45□□□□□ -1.7
TGFBR1-210ENST00000552573 DKK1O94907 266 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 GTF2IP78347 998 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 GAS6Q14393 721 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 MTFR1Q15390 333 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 SV2AQ7L0J3 742 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 TRIM22Q8IYM9 498 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 ZNF837Q96EG3 531 aaPredicted RBP4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 COL25A1Q9BXS0 654 aaPredicted RBP4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 IQSEC3Q9UPP2 1182 aaPredicted RBP4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 KIAA1024Q9UPX6 916 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 NOD1Q9Y239 953 aa4.44□□□□□ -1.7
TGFBR1-210ENST00000552573 CDC14CA4D256 554 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 PHKA2P46019 1235 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 SMTNP53814 917 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 CLDN10P78369 228 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 UBAP2LQ14157 1087 aaKnown RBP4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 TLR1Q15399 786 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 ZSCAN1Q8NBB4 408 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 RHBDD1Q8TEB9 315 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 CNTNAP3BQ96NU0 1288 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 CNTNAP3Q9BZ76 1288 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 TIMMDC1Q9NPL8 285 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 ZNF358Q9NW07 568 aa4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 MAFBQ9Y5Q3 323 aaPredicted RBP4.43□□□□□ -1.7
TGFBR1-210ENST00000552573 F11P03951 625 aa4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 EPHA4P54764 986 aa4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 TMEM214Q6NUQ4 689 aaKnown RBP4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 GMCL1Q96IK5 515 aa4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 GAS2L1Q99501 681 aaPredicted RBP4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 TFIP11Q9UBB9 837 aaKnown RBP4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 STK17AQ9UEE5 414 aa4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 SERTAD1Q9UHV2 236 aa4.42□□□□□ -1.7
TGFBR1-210ENST00000552573 A0A1B0GTH6 734 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 PALM3A6NDB9 673 aaPredicted RBP4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 A6NJY4 79 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 CDK2AP1O14519 115 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 SLURP2P0DP57 97 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 MSX1P28360 303 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 FOXK2Q01167 660 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 GNASQ5JWF2 1037 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 RIPOR1Q6ZS17 1223 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 PPP1R12CQ9BZL4 782 aa4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 MKRN1Q9UHC7 482 aaKnown RBP4.41□□□□□ -1.7
TGFBR1-210ENST00000552573 GPR25O00155 361 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 ATP4AP20648 1035 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 PLA2G4AP47712 749 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 KANK4Q5T7N3 995 aaPredicted RBP4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 CCDC102BQ68D86 513 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 TRIM50Q86XT4 487 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 SIX5Q8N196 739 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 OGFOD1Q8N543 542 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 TPCN2Q8NHX9 752 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 ZDHHC1Q8WTX9 485 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 GTPBP3Q969Y2 492 aaKnown RBP4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 CALR3Q96L12 384 aaKnown RBP4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 GPAMQ9HCL2 828 aa4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 SCHIP1Q9P0W5 487 aaPredicted RBP4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 ZNF777Q9ULD5 760 aaPredicted RBP4.4□□□□□ -1.71
TGFBR1-210ENST00000552573 H7C1W4 665 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 PSME1Q06323 249 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 CFAP70Q5T0N1 1121 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 ZNF385CQ66K41 422 aaPredicted RBP4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 TNS4Q8IZW8 715 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 LARGE2Q8N3Y3 721 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 WHAMMQ8TF30 809 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 NIFKQ9BYG3 293 aaKnown RBP4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 NUCKS1Q9H1E3 243 aaKnown RBP4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 CRISPLD1Q9H336 500 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 RUBCNLQ9H714 662 aa4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 DNAAF2Q9NVR5 837 aaKnown RBP4.39□□□□□ -1.71
TGFBR1-210ENST00000552573 M0R2N6 131 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 BACH1O14867 736 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 ADAMTS2O95450 1211 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 GTF2E1P29083 439 aaPredicted RBP4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 ATP1A2P50993 1020 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 SRSF11Q05519 484 aaKnown RBP4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 LBRQ14739 615 aaKnown RBP4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 CRTC2Q53ET0 693 aaPredicted RBP4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 C7orf43Q8WVR3 580 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 NDFIP2Q9NV92 336 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 HCN2Q9UL51 889 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 GTF3C3Q9Y5Q9 886 aa4.38□□□□□ -1.71
TGFBR1-210ENST00000552573 SFI1A8K8P3 1242 aa4.37□□□□□ -1.71
TGFBR1-210ENST00000552573 RASA1P20936 1047 aa4.37□□□□□ -1.71
TGFBR1-210ENST00000552573 TXLNAP40222 546 aa4.37□□□□□ -1.71
TGFBR1-210ENST00000552573 PTK7Q13308 1070 aa4.37□□□□□ -1.71
TGFBR1-210ENST00000552573 TEAD4Q15561 434 aa4.37□□□□□ -1.71
TGFBR1-210ENST00000552573 TBCELQ5QJ74 424 aa4.37□□□□□ -1.71
TGFBR1-210ENST00000552573 SH3PXD2AQ5TCZ1 1133 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms