RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 POU4F2Q12837 409 aa10.01□□□□□ -0.81
USP15-213ENST00000549268 USP17L2Q6R6M4 530 aa10.01□□□□□ -0.81
USP15-213ENST00000549268 TAS1R3Q7RTX0 852 aa10.01□□□□□ -0.81
USP15-213ENST00000549268 USP17L1Q7RTZ2 530 aa10.01□□□□□ -0.81
USP15-213ENST00000549268 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
USP15-213ENST00000549268 SLC4A9Q96Q91 983 aa10.01□□□□□ -0.81
USP15-213ENST00000549268 DYRK1BQ9Y463 629 aa10.01□□□□□ -0.81
USP15-213ENST00000549268 TMEM229AB2RXF0 380 aa10□□□□□ -0.81
USP15-213ENST00000549268 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
USP15-213ENST00000549268 DEPDC4Q8N2C3 294 aa10□□□□□ -0.81
USP15-213ENST00000549268 GMCL1Q96IK5 515 aa10□□□□□ -0.81
USP15-213ENST00000549268 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
USP15-213ENST00000549268 RHOQP17081 205 aa9.99□□□□□ -0.81
USP15-213ENST00000549268 GTF2E1P29083 439 aaPredicted RBP9.99□□□□□ -0.81
USP15-213ENST00000549268 GMPRP36959 345 aa9.99□□□□□ -0.81
USP15-213ENST00000549268 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
USP15-213ENST00000549268 STAU1O95793 577 aaKnown RBP9.98□□□□□ -0.81
USP15-213ENST00000549268 ATP1A2P50993 1020 aa9.98□□□□□ -0.81
USP15-213ENST00000549268 SMTNP53814 917 aa9.98□□□□□ -0.81
USP15-213ENST00000549268 TLR1Q15399 786 aa9.98□□□□□ -0.81
USP15-213ENST00000549268 GNASQ5JWF2 1037 aa9.98□□□□□ -0.81
USP15-213ENST00000549268 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
USP15-213ENST00000549268 PALM3A6NDB9 673 aaPredicted RBP9.97□□□□□ -0.81
USP15-213ENST00000549268 MTFR1Q15390 333 aa9.97□□□□□ -0.81
USP15-213ENST00000549268 TMEM214Q6NUQ4 689 aaKnown RBP9.97□□□□□ -0.81
USP15-213ENST00000549268 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
USP15-213ENST00000549268 BACH1O14867 736 aa9.96□□□□□ -0.82
USP15-213ENST00000549268 ZBTB7BO15156 539 aaPredicted RBP9.96□□□□□ -0.82
USP15-213ENST00000549268 INSM1Q01101 510 aaPredicted RBP9.96□□□□□ -0.82
USP15-213ENST00000549268 LARGE2Q8N3Y3 721 aa9.96□□□□□ -0.82
USP15-213ENST00000549268 RHBDD1Q8TEB9 315 aa9.96□□□□□ -0.82
USP15-213ENST00000549268 TIMMDC1Q9NPL8 285 aa9.96□□□□□ -0.82
USP15-213ENST00000549268 MKRN1Q9UHC7 482 aaKnown RBP9.96□□□□□ -0.82
USP15-213ENST00000549268 TRIM22Q8IYM9 498 aa9.95□□□□□ -0.82
USP15-213ENST00000549268 A0A1B0GTH6 734 aa9.94□□□□□ -0.82
USP15-213ENST00000549268 A6NJY4 79 aa9.94□□□□□ -0.82
USP15-213ENST00000549268 CDK2AP1O14519 115 aa9.94□□□□□ -0.82
USP15-213ENST00000549268 CLDN10P78369 228 aa9.94□□□□□ -0.82
USP15-213ENST00000549268 PSME1Q06323 249 aa9.94□□□□□ -0.82
USP15-213ENST00000549268 C4orf17Q53FE4 359 aa9.94□□□□□ -0.82
USP15-213ENST00000549268 SV2AQ7L0J3 742 aa9.94□□□□□ -0.82
USP15-213ENST00000549268 H7C1W4 665 aa9.93□□□□□ -0.82
USP15-213ENST00000549268 F11P03951 625 aa9.93□□□□□ -0.82
USP15-213ENST00000549268 SIX5Q8N196 739 aa9.93□□□□□ -0.82
USP15-213ENST00000549268 VWA5B2Q8N398 1253 aa9.93□□□□□ -0.82
USP15-213ENST00000549268 OGFOD1Q8N543 542 aa9.93□□□□□ -0.82
USP15-213ENST00000549268 GPR161Q8N6U8 529 aaKnown RBP9.93□□□□□ -0.82
USP15-213ENST00000549268 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
USP15-213ENST00000549268 ZNF358Q9NW07 568 aa9.93□□□□□ -0.82
USP15-213ENST00000549268 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
USP15-213ENST00000549268 M0R2N6 131 aa9.92□□□□□ -0.82
USP15-213ENST00000549268 CCDC102BQ68D86 513 aa9.92□□□□□ -0.82
USP15-213ENST00000549268 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
USP15-213ENST00000549268 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
USP15-213ENST00000549268 CUEDC1Q9NWM3 386 aaPredicted RBP9.92□□□□□ -0.82
USP15-213ENST00000549268 SERTAD1Q9UHV2 236 aa9.92□□□□□ -0.82
USP15-213ENST00000549268 RFX1P22670 979 aa9.91□□□□□ -0.82
USP15-213ENST00000549268 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
USP15-213ENST00000549268 KIAA1024Q9UPX6 916 aa9.91□□□□□ -0.82
USP15-213ENST00000549268 CDC14CA4D256 554 aa9.9□□□□□ -0.82
USP15-213ENST00000549268 DKK1O94907 266 aa9.9□□□□□ -0.82
USP15-213ENST00000549268 EPHA4P54764 986 aa9.9□□□□□ -0.82
USP15-213ENST00000549268 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
USP15-213ENST00000549268 DBN1Q16643 649 aa9.9□□□□□ -0.82
USP15-213ENST00000549268 KANK4Q5T7N3 995 aaPredicted RBP9.9□□□□□ -0.82
USP15-213ENST00000549268 TPCN2Q8NHX9 752 aa9.9□□□□□ -0.82
USP15-213ENST00000549268 C1orf216Q8TAB5 229 aa9.9□□□□□ -0.82
USP15-213ENST00000549268 ZNF837Q96EG3 531 aaPredicted RBP9.9□□□□□ -0.82
USP15-213ENST00000549268 GAS2L1Q99501 681 aaPredicted RBP9.9□□□□□ -0.82
USP15-213ENST00000549268 SCHIP1Q9P0W5 487 aaPredicted RBP9.9□□□□□ -0.82
USP15-213ENST00000549268 PHKA2P46019 1235 aa9.89□□□□□ -0.83
USP15-213ENST00000549268 FOXK2Q01167 660 aa9.89□□□□□ -0.83
USP15-213ENST00000549268 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
USP15-213ENST00000549268 RASA1P20936 1047 aa9.88□□□□□ -0.83
USP15-213ENST00000549268 LMOD1P29536 600 aaPredicted RBP9.88□□□□□ -0.83
USP15-213ENST00000549268 CFAP70Q5T0N1 1121 aa9.88□□□□□ -0.83
USP15-213ENST00000549268 MSX1P28360 303 aa9.87□□□□□ -0.83
USP15-213ENST00000549268 FOXR1Q6PIV2 292 aa9.87□□□□□ -0.83
USP15-213ENST00000549268 COL25A1Q9BXS0 654 aaPredicted RBP9.87□□□□□ -0.83
USP15-213ENST00000549268 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
USP15-213ENST00000549268 FAM196BA6NMK8 535 aa9.86□□□□□ -0.83
USP15-213ENST00000549268 LORP23490 312 aaPredicted RBP9.86□□□□□ -0.83
USP15-213ENST00000549268 KRT76Q01546 638 aa9.86□□□□□ -0.83
USP15-213ENST00000549268 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
USP15-213ENST00000549268 CRISPLD1Q9H336 500 aa9.86□□□□□ -0.83
USP15-213ENST00000549268 RBM19Q9Y4C8 960 aaKnown RBP9.86□□□□□ -0.83
USP15-213ENST00000549268 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
USP15-213ENST00000549268 PTK7Q13308 1070 aa9.85□□□□□ -0.83
USP15-213ENST00000549268 NUCKS1Q9H1E3 243 aaKnown RBP9.85□□□□□ -0.83
USP15-213ENST00000549268 ZDHHC3Q9NYG2 299 aa9.85□□□□□ -0.83
USP15-213ENST00000549268 USP3Q9Y6I4 520 aa9.85□□□□□ -0.83
USP15-213ENST00000549268 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
USP15-213ENST00000549268 TEAD4Q15561 434 aa9.84□□□□□ -0.83
USP15-213ENST00000549268 RNFT1Q5M7Z0 435 aa9.84□□□□□ -0.83
USP15-213ENST00000549268 TNS4Q8IZW8 715 aa9.84□□□□□ -0.83
USP15-213ENST00000549268 PGBD3Q8N328 593 aa9.84□□□□□ -0.83
USP15-213ENST00000549268 ZSCAN1Q8NBB4 408 aa9.84□□□□□ -0.83
USP15-213ENST00000549268 ZNF594Q96JF6 807 aaPredicted RBP9.84□□□□□ -0.83
USP15-213ENST00000549268 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
USP15-213ENST00000549268 THBS1P07996 1170 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms