RNA–Protein interactions for RNA: ENST00000549101.1

USP15-211, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-211ENST00000549101 RFX1P22670 979 aa11.32□□□□□ -0.6
USP15-211ENST00000549101 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
USP15-211ENST00000549101 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
USP15-211ENST00000549101 PPFIA3O75145 1194 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
USP15-211ENST00000549101 TLR1Q15399 786 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 CCDC155Q8N6L0 562 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 VRTNQ9H8Y1 702 aa11.31□□□□□ -0.6
USP15-211ENST00000549101 SPATA31C2B4DYI2 1134 aa11.3□□□□□ -0.6
USP15-211ENST00000549101 SMTNP53814 917 aa11.3□□□□□ -0.6
USP15-211ENST00000549101 TMEM214Q6NUQ4 689 aaKnown RBP11.3□□□□□ -0.6
USP15-211ENST00000549101 NBPF10Q6P3W6 841 aaKnown RBP11.3□□□□□ -0.6
USP15-211ENST00000549101 NBPF15Q8N660 670 aa11.3□□□□□ -0.6
USP15-211ENST00000549101 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
USP15-211ENST00000549101 ZNF358Q9NW07 568 aa11.3□□□□□ -0.6
USP15-211ENST00000549101 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
USP15-211ENST00000549101 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
USP15-211ENST00000549101 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
USP15-211ENST00000549101 H3BM21 787 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 BACH1O14867 736 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 WFS1O76024 890 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 DKK1O94907 266 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
USP15-211ENST00000549101 CDCA8Q53HL2 280 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 WDR44Q5JSH3 913 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 LARP1Q6PKG0 1096 aaKnown RBP11.28□□□□□ -0.6
USP15-211ENST00000549101 TAS1R3Q7RTX0 852 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 CCDC97Q96F63 343 aaPredicted RBP11.28□□□□□ -0.6
USP15-211ENST00000549101 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
USP15-211ENST00000549101 A6NJY4 79 aa11.27□□□□□ -0.61
USP15-211ENST00000549101 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
USP15-211ENST00000549101 SIX5Q8N196 739 aa11.27□□□□□ -0.61
USP15-211ENST00000549101 SLC16A10Q8TF71 515 aa11.27□□□□□ -0.61
USP15-211ENST00000549101 PHKA2P46019 1235 aa11.26□□□□□ -0.61
USP15-211ENST00000549101 PTK7Q13308 1070 aa11.26□□□□□ -0.61
USP15-211ENST00000549101 MTFR1Q15390 333 aa11.26□□□□□ -0.61
USP15-211ENST00000549101 GNASQ5JWF2 1037 aa11.26□□□□□ -0.61
USP15-211ENST00000549101 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
USP15-211ENST00000549101 LCE2AQ5TA79 106 aaPredicted RBP11.25□□□□□ -0.61
USP15-211ENST00000549101 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
USP15-211ENST00000549101 RHBDD1Q8TEB9 315 aa11.25□□□□□ -0.61
USP15-211ENST00000549101 TIMMDC1Q9NPL8 285 aa11.25□□□□□ -0.61
USP15-211ENST00000549101 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
USP15-211ENST00000549101 SFI1A8K8P3 1242 aa11.24□□□□□ -0.61
USP15-211ENST00000549101 CDK2AP1O14519 115 aa11.24□□□□□ -0.61
USP15-211ENST00000549101 LCE2CQ5TA81 110 aa11.24□□□□□ -0.61
USP15-211ENST00000549101 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
USP15-211ENST00000549101 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
USP15-211ENST00000549101 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
USP15-211ENST00000549101 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
USP15-211ENST00000549101 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
USP15-211ENST00000549101 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L21D6R901 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 ITGA6P23229 1130 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 EPHA4P54764 986 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
USP15-211ENST00000549101 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
USP15-211ENST00000549101 SCHIP1Q9P0W5 487 aaPredicted RBP11.23□□□□□ -0.61
USP15-211ENST00000549101 DPYDQ12882 1025 aa11.22□□□□□ -0.61
USP15-211ENST00000549101 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
USP15-211ENST00000549101 ANKMY2Q8IV38 441 aa11.22□□□□□ -0.61
USP15-211ENST00000549101 GAS2L1Q99501 681 aaPredicted RBP11.22□□□□□ -0.61
USP15-211ENST00000549101 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.21□□□□□ -0.61
USP15-211ENST00000549101 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.61
USP15-211ENST00000549101 SEC13P55735 322 aa11.21□□□□□ -0.61
USP15-211ENST00000549101 TSEN2Q8NCE0 465 aaKnown RBP11.21□□□□□ -0.61
USP15-211ENST00000549101 IRF7Q92985 503 aa11.21□□□□□ -0.61
USP15-211ENST00000549101 NIFKQ9BYG3 293 aaKnown RBP11.21□□□□□ -0.61
USP15-211ENST00000549101 M0R2N6 131 aa11.2□□□□□ -0.62
USP15-211ENST00000549101 FOXK2Q01167 660 aa11.2□□□□□ -0.62
USP15-211ENST00000549101 ZNF295-AS1Q8N0V1 137 aa11.2□□□□□ -0.62
USP15-211ENST00000549101 CUEDC1Q9NWM3 386 aaPredicted RBP11.2□□□□□ -0.62
USP15-211ENST00000549101 VWA5B2Q8N398 1253 aa11.19□□□□□ -0.62
USP15-211ENST00000549101 NANOS1Q8WY41 292 aaKnown RBP11.19□□□□□ -0.62
USP15-211ENST00000549101 ARXQ96QS3 562 aa11.19□□□□□ -0.62
USP15-211ENST00000549101 CABP1Q9NZU7 370 aa11.19□□□□□ -0.62
USP15-211ENST00000549101 F11P03951 625 aa11.18□□□□□ -0.62
USP15-211ENST00000549101 VSIG8P0DPA2 414 aa11.18□□□□□ -0.62
USP15-211ENST00000549101 PLA2G4AP47712 749 aa11.18□□□□□ -0.62
USP15-211ENST00000549101 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
USP15-211ENST00000549101 RIPOR1Q6ZS17 1223 aa11.18□□□□□ -0.62
USP15-211ENST00000549101 SLC9A9Q8IVB4 645 aa11.18□□□□□ -0.62
USP15-211ENST00000549101 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
USP15-211ENST00000549101 CDC14CA4D256 554 aa11.16□□□□□ -0.62
USP15-211ENST00000549101 DBN1Q16643 649 aa11.16□□□□□ -0.62
USP15-211ENST00000549101 GPR161Q8N6U8 529 aaKnown RBP11.16□□□□□ -0.62
USP15-211ENST00000549101 AIDAQ96BJ3 306 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms