RNA–Protein interactions for RNA: ENST00000544361.1

QKI-213, Transcript of QKI, KH domain containing RNA binding, human

TSL 5

Gene QKI, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
QKI-213	ENST00000544361	NOD1	Q9Y239	953 aa		8.53	□□□□□ -1.04
QKI-213	ENST00000544361	LZTS3	O60299	673 aa	Predicted RBP	8.52	□□□□□ -1.05
QKI-213	ENST00000544361	PHKA2	P46019	1235 aa		8.52	□□□□□ -1.05
QKI-213	ENST00000544361	GTF2I	P78347	998 aa		8.52	□□□□□ -1.05
QKI-213	ENST00000544361	KRT76	Q01546	638 aa		8.52	□□□□□ -1.05
QKI-213	ENST00000544361	PSME1	Q06323	249 aa		8.52	□□□□□ -1.05
QKI-213	ENST00000544361	TBC1D9	Q6ZT07	1266 aa		8.52	□□□□□ -1.05
QKI-213	ENST00000544361	ZNF837	Q96EG3	531 aa	Predicted RBP	8.52	□□□□□ -1.05
QKI-213	ENST00000544361	CNTNAP3B	Q96NU0	1288 aa		8.52	□□□□□ -1.05
QKI-213	ENST00000544361	CNTNAP3	Q9BZ76	1288 aa		8.52	□□□□□ -1.05
QKI-213	ENST00000544361	USP17L3	A6NCW0	530 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361	USP17L4	A6NCW7	530 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361		A6NJR5	290 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361	USP17L2	Q6R6M4	530 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361	USP17L1	Q7RTZ2	530 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361	TRIM22	Q8IYM9	498 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361	SERTAD1	Q9UHV2	236 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361	PCDHGA11	Q9Y5H2	935 aa		8.51	□□□□□ -1.05
QKI-213	ENST00000544361	TMEM229A	B2RXF0	380 aa		8.5	□□□□□ -1.05
QKI-213	ENST00000544361	LOR	P23490	312 aa	Predicted RBP	8.5	□□□□□ -1.05
QKI-213	ENST00000544361	C4orf17	Q53FE4	359 aa		8.5	□□□□□ -1.05
QKI-213	ENST00000544361	RNFT1	Q5M7Z0	435 aa		8.5	□□□□□ -1.05
QKI-213	ENST00000544361	RHBDD1	Q8TEB9	315 aa		8.5	□□□□□ -1.05
QKI-213	ENST00000544361	GPAM	Q9HCL2	828 aa		8.5	□□□□□ -1.05
QKI-213	ENST00000544361		A0A1B0GTH6	734 aa		8.49	□□□□□ -1.05
QKI-213	ENST00000544361		H7C1W4	665 aa		8.49	□□□□□ -1.05
QKI-213	ENST00000544361	ATP9B	O43861	1147 aa		8.49	□□□□□ -1.05
QKI-213	ENST00000544361	F11	P03951	625 aa		8.49	□□□□□ -1.05
QKI-213	ENST00000544361	PPARGC1B	Q86YN6	1023 aa	Known RBP	8.49	□□□□□ -1.05
QKI-213	ENST00000544361	PLEKHM2	Q8IWE5	1019 aa		8.49	□□□□□ -1.05
QKI-213	ENST00000544361	GMCL1	Q96IK5	515 aa		8.49	□□□□□ -1.05
QKI-213	ENST00000544361	FAM181B	A6NEQ2	426 aa		8.48	□□□□□ -1.05
QKI-213	ENST00000544361	SMTN	P53814	917 aa		8.48	□□□□□ -1.05
QKI-213	ENST00000544361	DBN1	Q16643	649 aa		8.48	□□□□□ -1.05
QKI-213	ENST00000544361	TRIM50	Q86XT4	487 aa		8.48	□□□□□ -1.05
QKI-213	ENST00000544361	CALR3	Q96L12	384 aa	Known RBP	8.48	□□□□□ -1.05
QKI-213	ENST00000544361	GPR25	O00155	361 aa		8.47	□□□□□ -1.05
QKI-213	ENST00000544361	PLA2G4A	P47712	749 aa		8.47	□□□□□ -1.05
QKI-213	ENST00000544361	FOXR1	Q6PIV2	292 aa		8.47	□□□□□ -1.05
QKI-213	ENST00000544361	GTPBP3	Q969Y2	492 aa	Known RBP	8.47	□□□□□ -1.05
QKI-213	ENST00000544361	NUCKS1	Q9H1E3	243 aa	Known RBP	8.47	□□□□□ -1.05
QKI-213	ENST00000544361		A6NJY4	79 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	BACH1	O14867	736 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	ATP1A2	P50993	1020 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	CLDN10	P78369	228 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	GAS6	Q14393	721 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	8.45	□□□□□ -1.06
QKI-213	ENST00000544361	TRERF1	Q96PN7	1200 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	SLC4A9	Q96Q91	983 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	NIFK	Q9BYG3	293 aa	Known RBP	8.45	□□□□□ -1.06
QKI-213	ENST00000544361	ZNF358	Q9NW07	568 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	KIAA1024	Q9UPX6	916 aa		8.45	□□□□□ -1.06
QKI-213	ENST00000544361	CSB-PGBD3	P0DP91	1061 aa		8.44	□□□□□ -1.06
QKI-213	ENST00000544361	MSX1	P28360	303 aa		8.44	□□□□□ -1.06
QKI-213	ENST00000544361	MTFR1	Q15390	333 aa		8.44	□□□□□ -1.06
QKI-213	ENST00000544361	PGBD3	Q8N328	593 aa		8.44	□□□□□ -1.06
QKI-213	ENST00000544361	TPCN2	Q8NHX9	752 aa		8.44	□□□□□ -1.06
QKI-213	ENST00000544361	RUBCNL	Q9H714	662 aa		8.44	□□□□□ -1.06
QKI-213	ENST00000544361	TFIP11	Q9UBB9	837 aa	Known RBP	8.44	□□□□□ -1.06
QKI-213	ENST00000544361	MKRN1	Q9UHC7	482 aa	Known RBP	8.44	□□□□□ -1.06
QKI-213	ENST00000544361	USP3	Q9Y6I4	520 aa		8.44	□□□□□ -1.06
QKI-213	ENST00000544361	PALM3	A6NDB9	673 aa	Predicted RBP	8.43	□□□□□ -1.06
QKI-213	ENST00000544361	OGFOD1	Q8N543	542 aa		8.43	□□□□□ -1.06
QKI-213	ENST00000544361	DNAAF2	Q9NVR5	837 aa	Known RBP	8.43	□□□□□ -1.06
QKI-213	ENST00000544361	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	8.43	□□□□□ -1.06
QKI-213	ENST00000544361	MAFB	Q9Y5Q3	323 aa	Predicted RBP	8.43	□□□□□ -1.06
QKI-213	ENST00000544361	CDK2AP1	O14519	115 aa		8.42	□□□□□ -1.06
QKI-213	ENST00000544361	CCDC102B	Q68D86	513 aa		8.42	□□□□□ -1.06
QKI-213	ENST00000544361	ZNF594	Q96JF6	807 aa	Predicted RBP	8.42	□□□□□ -1.06
QKI-213	ENST00000544361	ADAMTS2	O95450	1211 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	THBS1	P07996	1170 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	SLURP2	P0DP57	97 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	SRSF11	Q05519	484 aa	Known RBP	8.41	□□□□□ -1.06
QKI-213	ENST00000544361	NBPF1	Q3BBV0	1214 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	EFHC2	Q5JST6	749 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	ZNF295-AS1	Q8N0V1	137 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	SVOP	Q8N4V2	548 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	AIDA	Q96BJ3	306 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	PPP1R12C	Q9BZL4	782 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	MBIP	Q9NS73	344 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	CABP1	Q9NZU7	370 aa		8.41	□□□□□ -1.06
QKI-213	ENST00000544361	ATP4A	P20648	1035 aa		8.4	□□□□□ -1.06
QKI-213	ENST00000544361	LBR	Q14739	615 aa	Known RBP	8.4	□□□□□ -1.06
QKI-213	ENST00000544361	LARGE2	Q8N3Y3	721 aa		8.4	□□□□□ -1.06
QKI-213	ENST00000544361	SCHIP1	Q9P0W5	487 aa	Predicted RBP	8.4	□□□□□ -1.06
QKI-213	ENST00000544361	ZNF777	Q9ULD5	760 aa	Predicted RBP	8.4	□□□□□ -1.06
QKI-213	ENST00000544361	ZBTB7B	O15156	539 aa	Predicted RBP	8.39	□□□□□ -1.07
QKI-213	ENST00000544361	RASA1	P20936	1047 aa		8.39	□□□□□ -1.07
QKI-213	ENST00000544361	EPHA4	P54764	986 aa		8.39	□□□□□ -1.07
QKI-213	ENST00000544361	ZNF385C	Q66K41	422 aa	Predicted RBP	8.39	□□□□□ -1.07
QKI-213	ENST00000544361	SLC9A9	Q8IVB4	645 aa		8.39	□□□□□ -1.07
QKI-213	ENST00000544361	TNS4	Q8IZW8	715 aa		8.39	□□□□□ -1.07
QKI-213	ENST00000544361	SIX5	Q8N196	739 aa		8.39	□□□□□ -1.07
QKI-213	ENST00000544361	C1orf216	Q8TAB5	229 aa		8.39	□□□□□ -1.07
QKI-213	ENST00000544361	CRISPLD1	Q9H336	500 aa		8.39	□□□□□ -1.07
QKI-213	ENST00000544361	RBM19	Q9Y4C8	960 aa	Known RBP	8.39	□□□□□ -1.07
QKI-213	ENST00000544361	TAT	P17735	454 aa	Predicted RBP	8.38	□□□□□ -1.07
QKI-213	ENST00000544361	MX2	P20592	715 aa		8.38	□□□□□ -1.07
QKI-213	ENST00000544361	FOXK2	Q01167	660 aa		8.38	□□□□□ -1.07
QKI-213	ENST00000544361	TBCEL	Q5QJ74	424 aa		8.38	□□□□□ -1.07

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