RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 GFRA3O60609 400 aa11.92□□□□□ -0.5
TRAV11-201ENST00000539512 KCNA1Q09470 495 aa11.92□□□□□ -0.5
TRAV11-201ENST00000539512 MEIOBQ8N635 442 aa11.92□□□□□ -0.5
TRAV11-201ENST00000539512 CNKSR1Q969H4 720 aa11.92□□□□□ -0.5
TRAV11-201ENST00000539512 A0A1W2PRU2 124 aa11.91□□□□□ -0.5
TRAV11-201ENST00000539512 STAU1O95793 577 aaKnown RBP11.91□□□□□ -0.5
TRAV11-201ENST00000539512 CLN3Q13286 438 aa11.91□□□□□ -0.5
TRAV11-201ENST00000539512 TLR1Q15399 786 aa11.91□□□□□ -0.5
TRAV11-201ENST00000539512 MTMR7Q9Y216 660 aa11.91□□□□□ -0.5
TRAV11-201ENST00000539512 FAM69CQ0P6D2 419 aa11.9□□□□□ -0.5
TRAV11-201ENST00000539512 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
TRAV11-201ENST00000539512 ESYT1Q9BSJ8 1104 aa11.9□□□□□ -0.5
TRAV11-201ENST00000539512 ZNF395Q9H8N7 513 aaPredicted RBP11.9□□□□□ -0.5
TRAV11-201ENST00000539512 CHMP3Q9Y3E7 222 aa11.9□□□□□ -0.5
TRAV11-201ENST00000539512 NRG2O14511 850 aaPredicted RBP11.89□□□□□ -0.51
TRAV11-201ENST00000539512 TNS4Q8IZW8 715 aa11.89□□□□□ -0.51
TRAV11-201ENST00000539512 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
TRAV11-201ENST00000539512 PRIMPOLQ96LW4 560 aa11.89□□□□□ -0.51
TRAV11-201ENST00000539512 LGR5O75473 907 aa11.88□□□□□ -0.51
TRAV11-201ENST00000539512 DGAT1O75907 488 aa11.88□□□□□ -0.51
TRAV11-201ENST00000539512 IL2RAP01589 272 aa11.88□□□□□ -0.51
TRAV11-201ENST00000539512 BMP2P12643 396 aa11.88□□□□□ -0.51
TRAV11-201ENST00000539512 SMTNP53814 917 aa11.88□□□□□ -0.51
TRAV11-201ENST00000539512 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
TRAV11-201ENST00000539512 XAGE2Q96GT9 111 aa11.88□□□□□ -0.51
TRAV11-201ENST00000539512 A6NJY4 79 aa11.87□□□□□ -0.51
TRAV11-201ENST00000539512 SCARF1Q14162 830 aa11.87□□□□□ -0.51
TRAV11-201ENST00000539512 SLC27A3Q5K4L6 730 aa11.87□□□□□ -0.51
TRAV11-201ENST00000539512 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
TRAV11-201ENST00000539512 SLC4A9Q96Q91 983 aa11.87□□□□□ -0.51
TRAV11-201ENST00000539512 POLMQ9NP87 494 aaPredicted RBP11.87□□□□□ -0.51
TRAV11-201ENST00000539512 SSFA2P28290 1259 aa11.86□□□□□ -0.51
TRAV11-201ENST00000539512 CTC1Q2NKJ3 1217 aa11.86□□□□□ -0.51
TRAV11-201ENST00000539512 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
TRAV11-201ENST00000539512 TRIM26Q12899 539 aaPredicted RBP11.85□□□□□ -0.51
TRAV11-201ENST00000539512 C6orf118Q5T5N4 469 aa11.85□□□□□ -0.51
TRAV11-201ENST00000539512 TMEM214Q6NUQ4 689 aaKnown RBP11.85□□□□□ -0.51
TRAV11-201ENST00000539512 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
TRAV11-201ENST00000539512 SCG3Q8WXD2 468 aaKnown RBP11.85□□□□□ -0.51
TRAV11-201ENST00000539512 CXXC1Q9P0U4 656 aaPredicted RBP11.85□□□□□ -0.51
TRAV11-201ENST00000539512 PPP1R12BO60237 982 aaPredicted RBP11.84□□□□□ -0.51
TRAV11-201ENST00000539512 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
TRAV11-201ENST00000539512 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
TRAV11-201ENST00000539512 ZSCAN10Q96SZ4 725 aaPredicted RBP11.84□□□□□ -0.51
TRAV11-201ENST00000539512 AXIN1O15169 862 aa11.83□□□□□ -0.52
TRAV11-201ENST00000539512 IGFBP4P22692 258 aa11.83□□□□□ -0.52
TRAV11-201ENST00000539512 CENPCQ03188 943 aa11.83□□□□□ -0.52
TRAV11-201ENST00000539512 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
TRAV11-201ENST00000539512 MRPL14Q6P1L8 145 aaKnown RBP11.83□□□□□ -0.52
TRAV11-201ENST00000539512 SLC9A9Q8IVB4 645 aa11.83□□□□□ -0.52
TRAV11-201ENST00000539512 KDF1Q8NAX2 398 aaPredicted RBP11.83□□□□□ -0.52
TRAV11-201ENST00000539512 INSM2Q96T92 566 aaPredicted RBP11.83□□□□□ -0.52
TRAV11-201ENST00000539512 TSPAN10Q9H1Z9 355 aaPredicted RBP11.83□□□□□ -0.52
TRAV11-201ENST00000539512 SCHIP1Q9P0W5 487 aaPredicted RBP11.83□□□□□ -0.52
TRAV11-201ENST00000539512 CDK2AP1O14519 115 aa11.82□□□□□ -0.52
TRAV11-201ENST00000539512 AVPP01185 164 aa11.82□□□□□ -0.52
TRAV11-201ENST00000539512 WEE1P30291 646 aa11.82□□□□□ -0.52
TRAV11-201ENST00000539512 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAV11-201ENST00000539512 ATAD2Q6PL18 1390 aa11.81□□□□□ -0.52
TRAV11-201ENST00000539512 SPINT1O43278 529 aa11.81□□□□□ -0.52
TRAV11-201ENST00000539512 FOXO3O43524 673 aa11.81□□□□□ -0.52
TRAV11-201ENST00000539512 GPC1P35052 558 aa11.81□□□□□ -0.52
TRAV11-201ENST00000539512 IVNS1ABPQ9Y6Y0 642 aa11.81□□□□□ -0.52
TRAV11-201ENST00000539512 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
TRAV11-201ENST00000539512 PSMA6P60900 246 aaKnown RBP11.8□□□□□ -0.52
TRAV11-201ENST00000539512 MTFR1Q15390 333 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 OCLNQ16625 522 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 TBCELQ5QJ74 424 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 C1orf216Q8TAB5 229 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 MKNK1Q9BUB5 465 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 CABP1Q9NZU7 370 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 ZNF232Q9UNY5 417 aa11.8□□□□□ -0.52
TRAV11-201ENST00000539512 EPHA4P54764 986 aa11.79□□□□□ -0.52
TRAV11-201ENST00000539512 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
TRAV11-201ENST00000539512 FOXK2Q01167 660 aa11.78□□□□□ -0.52
TRAV11-201ENST00000539512 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
TRAV11-201ENST00000539512 NIFKQ9BYG3 293 aaKnown RBP11.78□□□□□ -0.52
TRAV11-201ENST00000539512 BMP1P13497 986 aa11.77□□□□□ -0.53
TRAV11-201ENST00000539512 SMCPP49901 116 aaPredicted RBP11.77□□□□□ -0.53
TRAV11-201ENST00000539512 RNF144AP50876 292 aaPredicted RBP11.77□□□□□ -0.53
TRAV11-201ENST00000539512 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.53
TRAV11-201ENST00000539512 HRH3Q9Y5N1 445 aa11.77□□□□□ -0.53
TRAV11-201ENST00000539512 SERTM1A2A2V5 107 aa11.76□□□□□ -0.53
TRAV11-201ENST00000539512 FKBP5Q13451 457 aaPredicted RBP11.76□□□□□ -0.53
TRAV11-201ENST00000539512 PHLDB3Q6NSJ2 640 aa11.76□□□□□ -0.53
TRAV11-201ENST00000539512 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
TRAV11-201ENST00000539512 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
TRAV11-201ENST00000539512 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
TRAV11-201ENST00000539512 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
TRAV11-201ENST00000539512 ABL1P00519 1130 aa11.75□□□□□ -0.53
TRAV11-201ENST00000539512 CTSOP43234 321 aaPredicted RBP11.75□□□□□ -0.53
TRAV11-201ENST00000539512 TAS1R3Q7RTX0 852 aa11.75□□□□□ -0.53
TRAV11-201ENST00000539512 TTLL8A6PVC2 850 aa11.74□□□□□ -0.53
TRAV11-201ENST00000539512 STAG2Q8N3U4 1231 aa11.74□□□□□ -0.53
TRAV11-201ENST00000539512 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
TRAV11-201ENST00000539512 C21orf2O43822 256 aa11.73□□□□□ -0.53
TRAV11-201ENST00000539512 LYSMD3Q7Z3D4 306 aa11.73□□□□□ -0.53
TRAV11-201ENST00000539512 CRIPAKQ8N1N5 446 aa11.73□□□□□ -0.53
TRAV11-201ENST00000539512 GRIP2Q9C0E4 1043 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms