RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
DDB1-214ENST00000539426 GNPATO15228 680 aa14.96□□□□□ -0.01
DDB1-214ENST00000539426 KDM6AO15550 1401 aaPredicted RBP14.96□□□□□ -0.01
DDB1-214ENST00000539426 COL5A3P25940 1745 aaPredicted RBP14.96□□□□□ -0.01
DDB1-214ENST00000539426 SLC4A9Q96Q91 983 aa14.96□□□□□ -0.01
DDB1-214ENST00000539426 MYH14Q7Z406 1995 aaKnown RBP14.96□□□□□ -0.01
DDB1-214ENST00000539426 ZNF831Q5JPB2 1677 aa14.96□□□□□ -0.01
DDB1-214ENST00000539426 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
DDB1-214ENST00000539426 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
DDB1-214ENST00000539426 WWC3Q9ULE0 1092 aa14.94□□□□□ -0.02
DDB1-214ENST00000539426 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
DDB1-214ENST00000539426 ZNF530Q6P9A1 599 aaPredicted RBP14.93□□□□□ -0.02
DDB1-214ENST00000539426 KIF13BQ9NQT8 1826 aa14.93□□□□□ -0.02
DDB1-214ENST00000539426 CEP350Q5VT06 3117 aa14.93□□□□□ -0.02
DDB1-214ENST00000539426 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
DDB1-214ENST00000539426 KIAA1551Q9HCM1 1747 aa14.92□□□□□ -0.02
DDB1-214ENST00000539426 ERVV-2B6SEH9 535 aa14.92□□□□□ -0.02
DDB1-214ENST00000539426 PLEKHO1Q53GL0 409 aaPredicted RBP14.92□□□□□ -0.02
DDB1-214ENST00000539426 MORC1Q86VD1 984 aa14.92□□□□□ -0.02
DDB1-214ENST00000539426 DCAF5Q96JK2 942 aa14.92□□□□□ -0.02
DDB1-214ENST00000539426 C4AP0C0L4 1744 aa14.92□□□□□ -0.02
DDB1-214ENST00000539426 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
DDB1-214ENST00000539426 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
DDB1-214ENST00000539426 CICQ96RK0 1608 aaPredicted RBP14.91□□□□□ -0.02
DDB1-214ENST00000539426 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
DDB1-214ENST00000539426 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
DDB1-214ENST00000539426 ADCY9O60503 1353 aa14.9□□□□□ -0.02
DDB1-214ENST00000539426 MMP10P09238 476 aa14.9□□□□□ -0.02
DDB1-214ENST00000539426 CCER1Q8TC90 406 aaPredicted RBP14.9□□□□□ -0.02
DDB1-214ENST00000539426 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
DDB1-214ENST00000539426 AMOTQ4VCS5 1084 aa14.89□□□□□ -0.03
DDB1-214ENST00000539426 RTCBQ9Y3I0 505 aaKnown RBP14.89□□□□□ -0.03
DDB1-214ENST00000539426 CNTNAP4Q9C0A0 1308 aa14.89□□□□□ -0.03
DDB1-214ENST00000539426 TJP1Q07157 1748 aa14.89□□□□□ -0.03
DDB1-214ENST00000539426 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
DDB1-214ENST00000539426 IL13P35225 146 aa14.88□□□□□ -0.03
DDB1-214ENST00000539426 CABP4P57796 275 aa14.88□□□□□ -0.03
DDB1-214ENST00000539426 AMER1Q5JTC6 1135 aaPredicted RBP14.88□□□□□ -0.03
DDB1-214ENST00000539426 TRAPPC3LQ5T215 181 aa14.88□□□□□ -0.03
DDB1-214ENST00000539426 RC3H1Q5TC82 1133 aaKnown RBP14.88□□□□□ -0.03
DDB1-214ENST00000539426 SULT6B1Q6IMI4 303 aa14.88□□□□□ -0.03
DDB1-214ENST00000539426 KNSTRNQ9Y448 316 aa14.88□□□□□ -0.03
DDB1-214ENST00000539426 C10orf71Q711Q0 1435 aa14.87□□□□□ -0.03
DDB1-214ENST00000539426 MTHFSP49914 203 aa14.87□□□□□ -0.03
DDB1-214ENST00000539426 ARHGEF1Q92888 912 aaKnown RBP14.87□□□□□ -0.03
DDB1-214ENST00000539426 BRCA1P38398 1863 aaKnown RBP14.86□□□□□ -0.03
DDB1-214ENST00000539426 RPS6KA4O75676 772 aa14.86□□□□□ -0.03
DDB1-214ENST00000539426 ADRA2BP18089 450 aa14.86□□□□□ -0.03
DDB1-214ENST00000539426 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
DDB1-214ENST00000539426 NFATC2IPQ8NCF5 419 aa14.86□□□□□ -0.03
DDB1-214ENST00000539426 KIF7Q2M1P5 1343 aa14.86□□□□□ -0.03
DDB1-214ENST00000539426 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
DDB1-214ENST00000539426 GYS1P13807 737 aa14.85□□□□□ -0.03
DDB1-214ENST00000539426 ADAMTS7Q9UKP4 1686 aa14.84□□□□□ -0.03
DDB1-214ENST00000539426 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
DDB1-214ENST00000539426 NLGN1Q8N2Q7 840 aa14.84□□□□□ -0.03
DDB1-214ENST00000539426 ZNF526Q8TF50 670 aaPredicted RBP14.84□□□□□ -0.03
DDB1-214ENST00000539426 RFC4P35249 363 aa14.83□□□□□ -0.04
DDB1-214ENST00000539426 GPBP1L1Q9HC44 474 aaPredicted RBP14.83□□□□□ -0.04
DDB1-214ENST00000539426 MRC1P22897 1456 aa14.82□□□□□ -0.04
DDB1-214ENST00000539426 A0A0G2JLW4 131 aa14.82□□□□□ -0.04
DDB1-214ENST00000539426 SRP68Q9UHB9 627 aaKnown RBP14.82□□□□□ -0.04
DDB1-214ENST00000539426 TGFB2P61812 414 aa14.81□□□□□ -0.04
DDB1-214ENST00000539426 AKAP4Q5JQC9 854 aa14.81□□□□□ -0.04
DDB1-214ENST00000539426 LGR6Q9HBX8 967 aa14.81□□□□□ -0.04
DDB1-214ENST00000539426 ARFGEF1Q9Y6D6 1849 aa14.8□□□□□ -0.04
DDB1-214ENST00000539426 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
DDB1-214ENST00000539426 HMOX1P09601 288 aa14.8□□□□□ -0.04
DDB1-214ENST00000539426 DPEP1P16444 411 aa14.8□□□□□ -0.04
DDB1-214ENST00000539426 SLC52A2Q9HAB3 445 aa14.8□□□□□ -0.04
DDB1-214ENST00000539426 CCDC87Q9NVE4 849 aa14.8□□□□□ -0.04
DDB1-214ENST00000539426 BCS1LQ9Y276 419 aa14.8□□□□□ -0.04
DDB1-214ENST00000539426 PARP3Q9Y6F1 533 aa14.8□□□□□ -0.04
DDB1-214ENST00000539426 USP42Q9H9J4 1324 aaKnown RBP14.8□□□□□ -0.04
DDB1-214ENST00000539426 DDR1Q08345 913 aa14.79□□□□□ -0.04
DDB1-214ENST00000539426 FKBP8Q14318 412 aa14.79□□□□□ -0.04
DDB1-214ENST00000539426 CC2D1BQ5T0F9 858 aaKnown RBP14.79□□□□□ -0.04
DDB1-214ENST00000539426 INTS5Q6P9B9 1019 aaKnown RBP14.79□□□□□ -0.04
DDB1-214ENST00000539426 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
DDB1-214ENST00000539426 DNAJC10Q8IXB1 793 aa14.79□□□□□ -0.04
DDB1-214ENST00000539426 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
DDB1-214ENST00000539426 KCNA3P22001 575 aa14.78□□□□□ -0.04
DDB1-214ENST00000539426 SLC39A6Q13433 755 aa14.78□□□□□ -0.04
DDB1-214ENST00000539426 COL3A1P02461 1466 aaPredicted RBP14.77□□□□□ -0.04
DDB1-214ENST00000539426 KIF3CO14782 793 aa14.77□□□□□ -0.05
DDB1-214ENST00000539426 MTHFSDQ2M296 383 aaKnown RBP14.77□□□□□ -0.05
DDB1-214ENST00000539426 AFDNP55196 1824 aaKnown RBP14.77□□□□□ -0.05
DDB1-214ENST00000539426 UBR2Q8IWV8 1755 aa14.77□□□□□ -0.05
DDB1-214ENST00000539426 SOS1Q07889 1333 aaPredicted RBP14.76□□□□□ -0.05
DDB1-214ENST00000539426 FCHSD2O94868 740 aa14.76□□□□□ -0.05
DDB1-214ENST00000539426 DIAPH1O60610 1272 aaKnown RBP14.75□□□□□ -0.05
DDB1-214ENST00000539426 CYP19A1P11511 503 aaPredicted RBP14.75□□□□□ -0.05
DDB1-214ENST00000539426 ARHGAP27Q6ZUM4 889 aa14.75□□□□□ -0.05
DDB1-214ENST00000539426 POLRMTO00411 1230 aaKnown RBP14.74□□□□□ -0.05
DDB1-214ENST00000539426 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
DDB1-214ENST00000539426 ZBTB1Q9Y2K1 713 aa14.74□□□□□ -0.05
DDB1-214ENST00000539426 SBF1O95248 1867 aa14.74□□□□□ -0.05
DDB1-214ENST00000539426 COL15A1P39059 1388 aa14.73□□□□□ -0.05
DDB1-214ENST00000539426 SIPA1L3O60292 1781 aaPredicted RBP14.73□□□□□ -0.05
DDB1-214ENST00000539426 NRXN2Q9P2S2 1712 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms