RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MTRQ99707 1265 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 UNC93B1Q9H1C4 597 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 SYNGAP1Q96PV0 1343 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 MAGEB6P1A0A0J9YX57 407 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 SFI1A8K8P3 1242 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 SPATA31C2B4DYI2 1134 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L15C9J2P7 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L10C9JJH3 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L13C9JLJ4 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L12C9JPN9 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L11C9JVI0 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L21D6R901 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L18D6R9N7 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L22D6RA61 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L17D6RBQ6 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L19D6RCP7 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L20D6RJB6 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 PRMT3O60678 531 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 GNRH1P01148 92 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L24Q0WX57 530 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 EML3Q32P44 896 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 THSD4Q6ZMP0 1018 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 MRPL50Q8N5N7 158 aaKnown RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 ZNF775Q96BV0 537 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 PRIMPOLQ96LW4 560 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 MKNK1Q9BUB5 465 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 MKRN1Q9UHC7 482 aaKnown RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 NOVA2Q9UNW9 492 aaKnown RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 C21orf2O43822 256 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 IGHA2P01877 340 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 RGS19P49795 217 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 PTPN12Q05209 780 aaKnown RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 DPYDQ12882 1025 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 USP4Q13107 963 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 ERFEQ4G0M1 354 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 TBCELQ5QJ74 424 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 ZNF669Q96BR6 464 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 KCTD12Q96CX2 325 aaKnown RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 NUDT12Q9BQG2 462 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 SAP130Q9H0E3 1048 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 LRRC4BQ9NT99 713 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 PCDHGA11Q9Y5H2 935 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 HRH3Q9Y5N1 445 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 SKIP12755 728 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 PPP4CP60510 307 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 FOXK2Q01167 660 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 TEAD4Q15561 434 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 TMCO4Q5TGY1 634 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 LRP10Q7Z4F1 713 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 OGFOD1Q8N543 542 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 PLPP7Q8NBV4 271 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 BAP1Q92560 729 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 DMRTB1Q96MA1 342 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 SPSB2Q99619 263 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 RBCK1Q9BYM8 510 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 ZDHHC3Q9NYG2 299 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 FCF1Q9Y324 198 aaKnown RBP1.8□□□□□ -2.12
HIF1A-204ENST00000539097 PCDHB3Q9Y5E6 796 aa1.8□□□□□ -2.12
HIF1A-204ENST00000539097 ZBTB39O15060 712 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 NR3C2P08235 984 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 PTPN5P54829 565 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 RAB15P59190 212 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 SH3BP2P78314 561 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 ARHGAP4P98171 946 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 EHHADHQ08426 723 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 FKBP5Q13451 457 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-204ENST00000539097 LARP1Q6PKG0 1096 aaKnown RBP1.79□□□□□ -2.12
HIF1A-204ENST00000539097 BPHLQ86WA6 291 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-204ENST00000539097 WNT2BQ93097 391 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 MKL1Q969V6 931 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 FAM161BQ96MY7 647 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 TMPRSS4Q9NRS4 437 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 NOD1Q9Y239 953 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 TLL2Q9Y6L7 1015 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 TMEM229AB2RXF0 380 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 ZPR1O75312 459 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 CTHP32929 405 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 STAC3Q96MF2 364 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 HCN2Q9UL51 889 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 EGFRP00533 1210 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 USP5P45974 858 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 SCNN1DP51172 638 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 SAMD5Q5TGI4 173 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 ZNF295-AS1Q8N0V1 137 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 TTC9Q92623 222 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 SRCIN1Q9C0H9 1055 aa1.79□□□□□ -2.12
HIF1A-204ENST00000539097 AVENQ9NQS1 362 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-204ENST00000539097 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-204ENST00000539097 RASA1P20936 1047 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 COL9A2Q14055 689 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-204ENST00000539097 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 CYP2U1Q7Z449 544 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 RAB6BQ9NRW1 208 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 DNMT3AQ9Y6K1 912 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-204ENST00000539097 FAM13AO94988 1023 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 WEE1P30291 646 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 ADD1P35611 737 aaKnown RBP1.78□□□□□ -2.12
HIF1A-204ENST00000539097 GRM5P41594 1212 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 RANGAP1P46060 587 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-204ENST00000539097 EPHA4P54764 986 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms