RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 YBX3P16989 372 aaKnown RBP eCLIP11.48□□□□□ -0.57
RPUSD4-209ENST00000534393 DCAF5Q96JK2 942 aa11.48□□□□□ -0.57
RPUSD4-209ENST00000534393 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
RPUSD4-209ENST00000534393 ASAP1Q9ULH1 1129 aa11.48□□□□□ -0.57
RPUSD4-209ENST00000534393 GNPATO15228 680 aa11.47□□□□□ -0.57
RPUSD4-209ENST00000534393 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
RPUSD4-209ENST00000534393 MORC1Q86VD1 984 aa11.47□□□□□ -0.57
RPUSD4-209ENST00000534393 LINC00116Q8NCU8 138 aa11.47□□□□□ -0.57
RPUSD4-209ENST00000534393 KNSTRNQ9Y448 316 aa11.47□□□□□ -0.57
RPUSD4-209ENST00000534393 C1orf141Q5JVX7 400 aa11.46□□□□□ -0.57
RPUSD4-209ENST00000534393 RTCBQ9Y3I0 505 aaKnown RBP11.46□□□□□ -0.57
RPUSD4-209ENST00000534393 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
RPUSD4-209ENST00000534393 COL5A3P25940 1745 aaPredicted RBP11.46□□□□□ -0.58
RPUSD4-209ENST00000534393 VIRMAQ69YN4 1812 aaKnown RBP11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 ADRA2BP18089 450 aa11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 CABP4P57796 275 aa11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 ITPK1Q13572 414 aa11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 TRAPPC3LQ5T215 181 aa11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 ZNF530Q6P9A1 599 aaPredicted RBP11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 SCN11AQ9UI33 1791 aa11.45□□□□□ -0.58
RPUSD4-209ENST00000534393 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
RPUSD4-209ENST00000534393 MTHFSP49914 203 aa11.44□□□□□ -0.58
RPUSD4-209ENST00000534393 AMIGO3Q86WK7 504 aa11.44□□□□□ -0.58
RPUSD4-209ENST00000534393 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
RPUSD4-209ENST00000534393 MYH14Q7Z406 1995 aaKnown RBP11.44□□□□□ -0.58
RPUSD4-209ENST00000534393 KDRP35968 1356 aa11.43□□□□□ -0.58
RPUSD4-209ENST00000534393 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
RPUSD4-209ENST00000534393 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
RPUSD4-209ENST00000534393 MMP10P09238 476 aa11.42□□□□□ -0.58
RPUSD4-209ENST00000534393 RFC4P35249 363 aa11.42□□□□□ -0.58
RPUSD4-209ENST00000534393 TGFB2P61812 414 aa11.42□□□□□ -0.58
RPUSD4-209ENST00000534393 SULT6B1Q6IMI4 303 aa11.42□□□□□ -0.58
RPUSD4-209ENST00000534393 SMIM5Q71RC9 77 aa11.41□□□□□ -0.58
RPUSD4-209ENST00000534393 GPBP1L1Q9HC44 474 aaPredicted RBP11.41□□□□□ -0.58
RPUSD4-209ENST00000534393 KDM6AO15550 1401 aaPredicted RBP11.41□□□□□ -0.58
RPUSD4-209ENST00000534393 ATP10DQ9P241 1426 aa11.41□□□□□ -0.58
RPUSD4-209ENST00000534393 N4BP2Q86UW6 1770 aaPredicted RBP11.41□□□□□ -0.58
RPUSD4-209ENST00000534393 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 CICQ96RK0 1608 aaPredicted RBP11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 IL13P35225 146 aa11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 AEBP1Q8IUX7 1158 aa11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 NFATC2IPQ8NCF5 419 aa11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 CCDC87Q9NVE4 849 aa11.4□□□□□ -0.58
RPUSD4-209ENST00000534393 BRCA1P38398 1863 aaKnown RBP11.39□□□□□ -0.59
RPUSD4-209ENST00000534393 AKAP4Q5JQC9 854 aa11.39□□□□□ -0.59
RPUSD4-209ENST00000534393 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
RPUSD4-209ENST00000534393 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
RPUSD4-209ENST00000534393 ARFGEF1Q9Y6D6 1849 aa11.38□□□□□ -0.59
RPUSD4-209ENST00000534393 PTCD1O75127 700 aaKnown RBP11.38□□□□□ -0.59
RPUSD4-209ENST00000534393 GYS1P13807 737 aa11.38□□□□□ -0.59
RPUSD4-209ENST00000534393 ADCY9O60503 1353 aa11.38□□□□□ -0.59
RPUSD4-209ENST00000534393 TJP1Q07157 1748 aa11.38□□□□□ -0.59
RPUSD4-209ENST00000534393 KIAA1551Q9HCM1 1747 aa11.38□□□□□ -0.59
RPUSD4-209ENST00000534393 CRKLP46109 303 aaKnown RBP11.37□□□□□ -0.59
RPUSD4-209ENST00000534393 PXDNLA1KZ92 1463 aa11.37□□□□□ -0.59
RPUSD4-209ENST00000534393 KIF7Q2M1P5 1343 aa11.36□□□□□ -0.59
RPUSD4-209ENST00000534393 C10orf71Q711Q0 1435 aa11.36□□□□□ -0.59
RPUSD4-209ENST00000534393 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
RPUSD4-209ENST00000534393 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
RPUSD4-209ENST00000534393 SLC52A2Q9HAB3 445 aa11.35□□□□□ -0.59
RPUSD4-209ENST00000534393 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
RPUSD4-209ENST00000534393 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
RPUSD4-209ENST00000534393 CEP350Q5VT06 3117 aa11.35□□□□□ -0.59
RPUSD4-209ENST00000534393 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
RPUSD4-209ENST00000534393 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
RPUSD4-209ENST00000534393 ZPR1O75312 459 aa11.34□□□□□ -0.59
RPUSD4-209ENST00000534393 ZNF526Q8TF50 670 aaPredicted RBP11.34□□□□□ -0.59
RPUSD4-209ENST00000534393 ADAMTS7Q9UKP4 1686 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 MRC1P22897 1456 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 NPC1L1Q9UHC9 1359 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 FCHSD2O94868 740 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 DPEP1P16444 411 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 INTS5Q6P9B9 1019 aaKnown RBP11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 VSIG10Q8N0Z9 540 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 PIM2Q9P1W9 311 aa11.33□□□□□ -0.6
RPUSD4-209ENST00000534393 SBF1O95248 1867 aa11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 UBR2Q8IWV8 1755 aa11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 RNMTO43148 476 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 HMOX1P09601 288 aa11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 FKBP8Q14318 412 aa11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-209ENST00000534393 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
RPUSD4-209ENST00000534393 HSPA6P17066 643 aa11.31□□□□□ -0.6
RPUSD4-209ENST00000534393 MTHFSDQ2M296 383 aaKnown RBP11.31□□□□□ -0.6
RPUSD4-209ENST00000534393 DALRD3Q5D0E6 543 aaKnown RBP11.31□□□□□ -0.6
RPUSD4-209ENST00000534393 DNAJC10Q8IXB1 793 aa11.31□□□□□ -0.6
RPUSD4-209ENST00000534393 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
RPUSD4-209ENST00000534393 SOS1Q07889 1333 aaPredicted RBP11.31□□□□□ -0.6
RPUSD4-209ENST00000534393 STARD3NLO95772 234 aa11.3□□□□□ -0.6
RPUSD4-209ENST00000534393 TM4SF1P30408 202 aa11.3□□□□□ -0.6
RPUSD4-209ENST00000534393 TTC5Q8N0Z6 440 aa11.3□□□□□ -0.6
RPUSD4-209ENST00000534393 GAS2L2Q8NHY3 880 aa11.3□□□□□ -0.6
RPUSD4-209ENST00000534393 TEX13AQ9BXU3 409 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms