RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 KDRP35968 1356 aa23.42■■□□□ 1.34
RPUSD4-207ENST00000532800 GNPATO15228 680 aa23.42■■□□□ 1.34
RPUSD4-207ENST00000532800 AEBP1Q8IUX7 1158 aa23.42■■□□□ 1.34
RPUSD4-207ENST00000532800 CD2APQ9Y5K6 639 aa23.42■■□□□ 1.34
RPUSD4-207ENST00000532800 ZNF530Q6P9A1 599 aaPredicted RBP23.4■■□□□ 1.34
RPUSD4-207ENST00000532800 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
RPUSD4-207ENST00000532800 ZNF831Q5JPB2 1677 aa23.39■■□□□ 1.34
RPUSD4-207ENST00000532800 GRIN3BO60391 1043 aa23.39■■□□□ 1.33
RPUSD4-207ENST00000532800 PLEKHO1Q53GL0 409 aaPredicted RBP23.39■■□□□ 1.33
RPUSD4-207ENST00000532800 COL5A3P25940 1745 aaPredicted RBP23.39■■□□□ 1.33
RPUSD4-207ENST00000532800 ERVV-2B6SEH9 535 aa23.38■■□□□ 1.33
RPUSD4-207ENST00000532800 DCAF5Q96JK2 942 aa23.38■■□□□ 1.33
RPUSD4-207ENST00000532800 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
RPUSD4-207ENST00000532800 KNSTRNQ9Y448 316 aa23.37■■□□□ 1.33
RPUSD4-207ENST00000532800 RBM42Q9BTD8 480 aaKnown RBP23.36■■□□□ 1.33
RPUSD4-207ENST00000532800 WWC3Q9ULE0 1092 aa23.36■■□□□ 1.33
RPUSD4-207ENST00000532800 C1QTNF8P60827 252 aa23.35■■□□□ 1.33
RPUSD4-207ENST00000532800 AMOTQ4VCS5 1084 aa23.35■■□□□ 1.33
RPUSD4-207ENST00000532800 SULT6B1Q6IMI4 303 aa23.35■■□□□ 1.33
RPUSD4-207ENST00000532800 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
RPUSD4-207ENST00000532800 AMER1Q5JTC6 1135 aaPredicted RBP23.34■■□□□ 1.33
RPUSD4-207ENST00000532800 IL13P35225 146 aa23.33■■□□□ 1.33
RPUSD4-207ENST00000532800 CABP4P57796 275 aa23.33■■□□□ 1.33
RPUSD4-207ENST00000532800 MYH14Q7Z406 1995 aaKnown RBP23.32■■□□□ 1.32
RPUSD4-207ENST00000532800 MTHFSP49914 203 aa23.32■■□□□ 1.32
RPUSD4-207ENST00000532800 RTCBQ9Y3I0 505 aaKnown RBP23.32■■□□□ 1.32
RPUSD4-207ENST00000532800 C4AP0C0L4 1744 aa23.31■■□□□ 1.32
RPUSD4-207ENST00000532800 GIGYF1O75420 1035 aaPredicted RBP23.31■■□□□ 1.32
RPUSD4-207ENST00000532800 MMP10P09238 476 aa23.31■■□□□ 1.32
RPUSD4-207ENST00000532800 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
RPUSD4-207ENST00000532800 SCN11AQ9UI33 1791 aa23.31■■□□□ 1.32
RPUSD4-207ENST00000532800 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
RPUSD4-207ENST00000532800 SENP3-EIF4A1A0A087X0R7 540 aa23.3■■□□□ 1.32
RPUSD4-207ENST00000532800 KIAA1551Q9HCM1 1747 aa23.3■■□□□ 1.32
RPUSD4-207ENST00000532800 CNTNAP4Q9C0A0 1308 aa23.3■■□□□ 1.32
RPUSD4-207ENST00000532800 KIF13BQ9NQT8 1826 aa23.29■■□□□ 1.32
RPUSD4-207ENST00000532800 TJP1Q07157 1748 aa23.29■■□□□ 1.32
RPUSD4-207ENST00000532800 TRAPPC3LQ5T215 181 aa23.29■■□□□ 1.32
RPUSD4-207ENST00000532800 ATP10DQ9P241 1426 aa23.29■■□□□ 1.32
RPUSD4-207ENST00000532800 PTCD1O75127 700 aaKnown RBP23.28■■□□□ 1.32
RPUSD4-207ENST00000532800 RC3H1Q5TC82 1133 aaKnown RBP23.28■■□□□ 1.32
RPUSD4-207ENST00000532800 ARHGEF1Q92888 912 aaKnown RBP23.28■■□□□ 1.32
RPUSD4-207ENST00000532800 NFATC2IPQ8NCF5 419 aa23.27■■□□□ 1.32
RPUSD4-207ENST00000532800 N4BP2Q86UW6 1770 aaPredicted RBP23.27■■□□□ 1.32
RPUSD4-207ENST00000532800 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
RPUSD4-207ENST00000532800 RPS6KA4O75676 772 aa23.26■■□□□ 1.31
RPUSD4-207ENST00000532800 VIRMAQ69YN4 1812 aaKnown RBP23.26■■□□□ 1.31
RPUSD4-207ENST00000532800 ADCY9O60503 1353 aa23.26■■□□□ 1.31
RPUSD4-207ENST00000532800 ADRA2BP18089 450 aa23.25■■□□□ 1.31
RPUSD4-207ENST00000532800 GYS1P13807 737 aa23.24■■□□□ 1.31
RPUSD4-207ENST00000532800 C10orf71Q711Q0 1435 aa23.24■■□□□ 1.31
RPUSD4-207ENST00000532800 HMOX1P09601 288 aa23.23■■□□□ 1.31
RPUSD4-207ENST00000532800 CRKLP46109 303 aaKnown RBP23.23■■□□□ 1.31
RPUSD4-207ENST00000532800 NLGN1Q8N2Q7 840 aa23.23■■□□□ 1.31
RPUSD4-207ENST00000532800 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
RPUSD4-207ENST00000532800 RFC4P35249 363 aa23.22■■□□□ 1.31
RPUSD4-207ENST00000532800 AKAP4Q5JQC9 854 aa23.22■■□□□ 1.31
RPUSD4-207ENST00000532800 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
RPUSD4-207ENST00000532800 MRC1P22897 1456 aa23.21■■□□□ 1.31
RPUSD4-207ENST00000532800 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
RPUSD4-207ENST00000532800 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
RPUSD4-207ENST00000532800 ZNF526Q8TF50 670 aaPredicted RBP23.19■■□□□ 1.3
RPUSD4-207ENST00000532800 SLC52A2Q9HAB3 445 aa23.19■■□□□ 1.3
RPUSD4-207ENST00000532800 SRP68Q9UHB9 627 aaKnown RBP23.19■■□□□ 1.3
RPUSD4-207ENST00000532800 BRCA1P38398 1863 aaKnown RBP23.18■■□□□ 1.3
RPUSD4-207ENST00000532800 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
RPUSD4-207ENST00000532800 GPBP1L1Q9HC44 474 aaPredicted RBP23.17■■□□□ 1.3
RPUSD4-207ENST00000532800 CCDC87Q9NVE4 849 aa23.17■■□□□ 1.3
RPUSD4-207ENST00000532800 PARP3Q9Y6F1 533 aa23.17■■□□□ 1.3
RPUSD4-207ENST00000532800 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 RNMTO43148 476 aaKnown RBP23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 TGFB2P61812 414 aa23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 MTHFSDQ2M296 383 aaKnown RBP23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 INTS5Q6P9B9 1019 aaKnown RBP23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 DNAJC10Q8IXB1 793 aa23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 KCPQ6ZWJ8 1503 aa23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 COL3A1P02461 1466 aaPredicted RBP23.16■■□□□ 1.3
RPUSD4-207ENST00000532800 DPEP1P16444 411 aa23.15■■□□□ 1.3
RPUSD4-207ENST00000532800 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
RPUSD4-207ENST00000532800 FKBP8Q14318 412 aa23.15■■□□□ 1.3
RPUSD4-207ENST00000532800 BCS1LQ9Y276 419 aa23.15■■□□□ 1.3
RPUSD4-207ENST00000532800 CEP350Q5VT06 3117 aa23.14■■□□□ 1.29
RPUSD4-207ENST00000532800 DDR1Q08345 913 aa23.13■■□□□ 1.29
RPUSD4-207ENST00000532800 UBR2Q8IWV8 1755 aa23.12■■□□□ 1.29
RPUSD4-207ENST00000532800 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
RPUSD4-207ENST00000532800 SOS1Q07889 1333 aaPredicted RBP23.1■■□□□ 1.29
RPUSD4-207ENST00000532800 FCHSD2O94868 740 aa23.09■■□□□ 1.29
RPUSD4-207ENST00000532800 CYP19A1P11511 503 aaPredicted RBP23.09■■□□□ 1.29
RPUSD4-207ENST00000532800 KCNA3P22001 575 aa23.09■■□□□ 1.29
RPUSD4-207ENST00000532800 ARFGEF1Q9Y6D6 1849 aa23.09■■□□□ 1.29
RPUSD4-207ENST00000532800 USPL1Q5W0Q7 1092 aa23.08■■□□□ 1.29
RPUSD4-207ENST00000532800 U2SURPO15042 1029 aaKnown RBP23.07■■□□□ 1.28
RPUSD4-207ENST00000532800 ARHGAP27Q6ZUM4 889 aa23.07■■□□□ 1.28
RPUSD4-207ENST00000532800 ZBTB1Q9Y2K1 713 aa23.07■■□□□ 1.28
RPUSD4-207ENST00000532800 COL15A1P39059 1388 aa23.06■■□□□ 1.28
RPUSD4-207ENST00000532800 POLRMTO00411 1230 aaKnown RBP23.06■■□□□ 1.28
RPUSD4-207ENST00000532800 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
RPUSD4-207ENST00000532800 SIPA1L3O60292 1781 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms