RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CCDC102AQ96A19 550 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 DDX49Q9Y6V7 483 aaKnown RBP7.89□□□□□ -1.15
SDC2-208ENST00000523877 CCDC196A0A1B0GTZ2 297 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 TLDC2A0PJX2 215 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 PABPN1LA6NDY0 278 aaKnown RBP7.88□□□□□ -1.15
SDC2-208ENST00000523877 ERICH4A6NGS2 130 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 CD53P19397 219 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 TRPC1P48995 793 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 GTF2A1P52655 376 aaPredicted RBP7.88□□□□□ -1.15
SDC2-208ENST00000523877 CC2D1AQ6P1N0 951 aaPredicted RBP7.88□□□□□ -1.15
SDC2-208ENST00000523877 IQCF2Q8IXL9 164 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 NEUROD6Q96NK8 337 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 TEX13AQ9BXU3 409 aaPredicted RBP7.88□□□□□ -1.15
SDC2-208ENST00000523877 SEZ6LQ9BYH1 1024 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
SDC2-208ENST00000523877 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 KIF3AQ9Y496 699 aa7.88□□□□□ -1.15
SDC2-208ENST00000523877 ANKRD18BA2A2Z9 1011 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 H0YHG0 523 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 MAGEA8P43361 318 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 RASSF7Q02833 373 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 DCTN1Q14203 1278 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 MFSD4BQ5TF39 518 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 EFCAB2Q5VUJ9 269 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 CCDC70Q6NSX1 233 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 C16orf87Q6PH81 154 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 SMCR8Q8TEV9 937 aaPredicted RBP7.87□□□□□ -1.15
SDC2-208ENST00000523877 SPACA7Q96KW9 195 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 ZNF396Q96N95 335 aaPredicted RBP7.87□□□□□ -1.15
SDC2-208ENST00000523877 LZTS2Q9BRK4 669 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 ZHX3Q9H4I2 956 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 CHMP3Q9Y3E7 222 aa7.87□□□□□ -1.15
SDC2-208ENST00000523877 BAZ1AQ9NRL2 1556 aaPredicted RBP7.87□□□□□ -1.15
SDC2-208ENST00000523877 TPPPO94811 219 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 IGHDP01880 384 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 FOSL1P15407 271 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 COL19A1Q14993 1142 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 SKIV2LQ15477 1246 aaKnown RBP7.86□□□□□ -1.15
SDC2-208ENST00000523877 AMOTQ4VCS5 1084 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 EGFLAMQ63HQ2 1017 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 MSL1Q68DK7 614 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 TXNDC2Q86VQ3 553 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 FNBP4Q8N3X1 1017 aaPredicted RBP7.86□□□□□ -1.15
SDC2-208ENST00000523877 SYAP1Q96A49 352 aaPredicted RBP7.86□□□□□ -1.15
SDC2-208ENST00000523877 TIGD1Q96MW7 591 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 AGAP3Q96P47 875 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 FMNL2Q96PY5 1086 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 LRRC27Q9C0I9 530 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 SPC25Q9HBM1 224 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 SFMBT1Q9UHJ3 866 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 TCEAL9Q9UHQ7 104 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 THRAP3Q9Y2W1 955 aaKnown RBP7.86□□□□□ -1.15
SDC2-208ENST00000523877 NCAPD3P42695 1498 aa7.86□□□□□ -1.15
SDC2-208ENST00000523877 CCDC159P0C7I6 412 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 MS4A1P11836 297 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 EVA1CP58658 441 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 NT5DC4Q86YG4 428 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 BHMTQ93088 406 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 RMDN2Q96LZ7 410 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 SLC26A8Q96RN1 970 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 EPAS1Q99814 870 aa7.85□□□□□ -1.15
SDC2-208ENST00000523877 TMCO5BA8MYB1 307 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 HIP1RO75146 1068 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 GIGYF1O75420 1035 aaPredicted RBP7.84□□□□□ -1.15
SDC2-208ENST00000523877 MTA2O94776 668 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 ZNF16P17020 682 aaPredicted RBP7.84□□□□□ -1.15
SDC2-208ENST00000523877 TNNT3P45378 269 aaPredicted RBP7.84□□□□□ -1.15
SDC2-208ENST00000523877 TMED1Q13445 227 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 SAFB2Q14151 953 aaKnown RBP eCLIP7.84□□□□□ -1.15
SDC2-208ENST00000523877 KCTD2Q14681 263 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 NKX1-1Q15270 411 aaPredicted RBP7.84□□□□□ -1.15
SDC2-208ENST00000523877 ZNF394Q53GI3 561 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 SOGA3Q5TF21 947 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 SDE2Q6IQ49 451 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 ANKRD13DQ6ZTN6 518 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 TAX1BP1Q86VP1 789 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 KRI1Q8N9T8 703 aaKnown RBP7.84□□□□□ -1.15
SDC2-208ENST00000523877 C17orf50Q8WW18 174 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 TEKT1Q969V4 418 aa7.84□□□□□ -1.15
SDC2-208ENST00000523877 TULP2O00295 520 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 PPFIA2O75334 1257 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 U2AF1L5P0DN76 240 aaPredicted RBP7.83□□□□□ -1.16
SDC2-208ENST00000523877 SKILP12757 684 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 KCNJ4P48050 445 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 U2AF1Q01081 240 aaKnown RBP eCLIP7.83□□□□□ -1.16
SDC2-208ENST00000523877 POU5F1BQ06416 359 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 PDE4DQ08499 809 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 RASA3Q14644 834 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 E2F5Q15329 346 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 TSNAXIP1Q2TAA8 658 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 FILIP1LQ4L180 1135 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 BRINP2Q9C0B6 783 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 IQCGQ9H095 443 aaKnown RBP7.83□□□□□ -1.16
SDC2-208ENST00000523877 RMI1Q9H9A7 625 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 USTQ9Y2C2 406 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 ZNF652Q9Y2D9 606 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 IKBKGQ9Y6K9 419 aa7.83□□□□□ -1.16
SDC2-208ENST00000523877 TRIM64CA6NLI5 447 aa7.82□□□□□ -1.16
SDC2-208ENST00000523877 PRC1O43663 620 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms