RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 XAGE2Q96GT9 111 aa8.46□□□□□ -1.06
CTNNA1-238ENST00000523298 M0R2N6 131 aa8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 BRD1O95696 1058 aa8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 ATP2B4P23634 1241 aa8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 WEE1P30291 646 aa8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 PTGIRP43119 386 aa8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 ZNF295-AS1Q8N0V1 137 aa8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 SLC4A9Q96Q91 983 aa8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 FHDC1Q9C0D6 1143 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-238ENST00000523298 RGS20O76081 388 aa8.44□□□□□ -1.06
CTNNA1-238ENST00000523298 FOXK2Q01167 660 aa8.44□□□□□ -1.06
CTNNA1-238ENST00000523298 CNKSR1Q969H4 720 aa8.44□□□□□ -1.06
CTNNA1-238ENST00000523298 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
CTNNA1-238ENST00000523298 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-238ENST00000523298 IQSEC3Q9UPP2 1182 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-238ENST00000523298 FAM187AA6NFU0 413 aa8.43□□□□□ -1.06
CTNNA1-238ENST00000523298 CLN3Q13286 438 aa8.43□□□□□ -1.06
CTNNA1-238ENST00000523298 FKBP5Q13451 457 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-238ENST00000523298 MTFR1Q15390 333 aa8.43□□□□□ -1.06
CTNNA1-238ENST00000523298 CXXC1Q9P0U4 656 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-238ENST00000523298 CAPN5O15484 640 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-238ENST00000523298 AVPP01185 164 aa8.42□□□□□ -1.06
CTNNA1-238ENST00000523298 TXNDC2Q86VQ3 553 aa8.42□□□□□ -1.06
CTNNA1-238ENST00000523298 ESYT1Q9BSJ8 1104 aa8.42□□□□□ -1.06
CTNNA1-238ENST00000523298 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-238ENST00000523298 MEN1O00255 615 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 BMP1P13497 986 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 SMTNP53814 917 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 CENPCQ03188 943 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 SH3PXD2AQ5TCZ1 1133 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 FOXD4L5Q5VV16 416 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 TAS1R3Q7RTX0 852 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 INSM2Q96T92 566 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 SCHIP1Q9P0W5 487 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 SEPT3Q9UH03 358 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 IVNS1ABPQ9Y6Y0 642 aa8.41□□□□□ -1.06
CTNNA1-238ENST00000523298 A6NJY4 79 aa8.4□□□□□ -1.06
CTNNA1-238ENST00000523298 CTSOP43234 321 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-238ENST00000523298 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.06
CTNNA1-238ENST00000523298 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
CTNNA1-238ENST00000523298 ZDHHC1Q8WTX9 485 aa8.4□□□□□ -1.06
CTNNA1-238ENST00000523298 SCG3Q8WXD2 468 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-238ENST00000523298 MKNK1Q9BUB5 465 aa8.4□□□□□ -1.06
CTNNA1-238ENST00000523298 ATAD2Q6PL18 1390 aa8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 GFRA3O60609 400 aa8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 SERPINB4P48594 390 aa8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 PDE4CQ08493 712 aa8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 TLR1Q15399 786 aa8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 DACH1Q9UI36 760 aa8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-238ENST00000523298 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
CTNNA1-238ENST00000523298 SPINT1O43278 529 aa8.38□□□□□ -1.07
CTNNA1-238ENST00000523298 KCNA1Q09470 495 aa8.38□□□□□ -1.07
CTNNA1-238ENST00000523298 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
CTNNA1-238ENST00000523298 BACH1O14867 736 aa8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 IGFBP4P22692 258 aa8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 ESCO1Q5FWF5 840 aa8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 C6orf118Q5T5N4 469 aa8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 C1orf216Q8TAB5 229 aa8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 KLRG1Q96E93 195 aa8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 GZF1Q9H116 711 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 GNEQ9Y223 722 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-238ENST00000523298 LCE2BO14633 110 aa8.36□□□□□ -1.07
CTNNA1-238ENST00000523298 MRPL14Q6P1L8 145 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-238ENST00000523298 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
CTNNA1-238ENST00000523298 PARP3Q9Y6F1 533 aa8.36□□□□□ -1.07
CTNNA1-238ENST00000523298 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-238ENST00000523298 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
CTNNA1-238ENST00000523298 POTEAQ6S8J7 498 aa8.35□□□□□ -1.07
CTNNA1-238ENST00000523298 CHMP7Q8WUX9 453 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-238ENST00000523298 TSEN34Q9BSV6 310 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-238ENST00000523298 C2orf49Q9BVC5 232 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-238ENST00000523298 SAP130Q9H0E3 1048 aa8.35□□□□□ -1.07
CTNNA1-238ENST00000523298 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 EML1O00423 815 aa8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 PPP1R12BO60237 982 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 SMCPP49901 116 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 MTMR3Q13615 1198 aa8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 ECM1Q16610 540 aa8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 FAM26DQ5JW98 314 aa8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 DNMT3AQ9Y6K1 912 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-238ENST00000523298 DGAT1O75907 488 aa8.33□□□□□ -1.08
CTNNA1-238ENST00000523298 ZNF211Q13398 564 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-238ENST00000523298 PPARGC1BQ86YN6 1023 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-238ENST00000523298 RNF217Q8TC41 542 aa8.33□□□□□ -1.08
CTNNA1-238ENST00000523298 NLRP3Q96P20 1036 aa8.33□□□□□ -1.08
CTNNA1-238ENST00000523298 ANO2Q9NQ90 1003 aa8.33□□□□□ -1.08
CTNNA1-238ENST00000523298 AAASQ9NRG9 546 aa8.33□□□□□ -1.08
CTNNA1-238ENST00000523298 BMP2P12643 396 aa8.32□□□□□ -1.08
CTNNA1-238ENST00000523298 ARID4AP29374 1257 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-238ENST00000523298 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
CTNNA1-238ENST00000523298 C4orf17Q53FE4 359 aa8.32□□□□□ -1.08
CTNNA1-238ENST00000523298 CRIPAKQ8N1N5 446 aa8.32□□□□□ -1.08
CTNNA1-238ENST00000523298 ZFP42Q96MM3 310 aa8.32□□□□□ -1.08
CTNNA1-238ENST00000523298 ZSCAN10Q96SZ4 725 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-238ENST00000523298 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms