RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
SDC2-207ENST00000522911 ITPK1Q13572 414 aa12.94□□□□□ -0.34
SDC2-207ENST00000522911 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
SDC2-207ENST00000522911 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
SDC2-207ENST00000522911 CICQ96RK0 1608 aaPredicted RBP12.93□□□□□ -0.34
SDC2-207ENST00000522911 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
SDC2-207ENST00000522911 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
SDC2-207ENST00000522911 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
SDC2-207ENST00000522911 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
SDC2-207ENST00000522911 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
SDC2-207ENST00000522911 GNPATO15228 680 aa12.91□□□□□ -0.34
SDC2-207ENST00000522911 TGFB2P61812 414 aa12.91□□□□□ -0.34
SDC2-207ENST00000522911 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
SDC2-207ENST00000522911 NLGN1Q8N2Q7 840 aa12.91□□□□□ -0.34
SDC2-207ENST00000522911 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
SDC2-207ENST00000522911 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
SDC2-207ENST00000522911 PHF14O94880 888 aa12.9□□□□□ -0.34
SDC2-207ENST00000522911 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
SDC2-207ENST00000522911 PANK3Q9H999 370 aa12.9□□□□□ -0.34
SDC2-207ENST00000522911 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
SDC2-207ENST00000522911 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
SDC2-207ENST00000522911 HSPA5P11021 654 aaKnown RBP12.89□□□□□ -0.35
SDC2-207ENST00000522911 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
SDC2-207ENST00000522911 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
SDC2-207ENST00000522911 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
SDC2-207ENST00000522911 PXDNLA1KZ92 1463 aa12.88□□□□□ -0.35
SDC2-207ENST00000522911 MMP10P09238 476 aa12.87□□□□□ -0.35
SDC2-207ENST00000522911 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
SDC2-207ENST00000522911 GPBP1L1Q9HC44 474 aaPredicted RBP12.87□□□□□ -0.35
SDC2-207ENST00000522911 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
SDC2-207ENST00000522911 GYS1P13807 737 aa12.86□□□□□ -0.35
SDC2-207ENST00000522911 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
SDC2-207ENST00000522911 SMIM5Q71RC9 77 aa12.86□□□□□ -0.35
SDC2-207ENST00000522911 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
SDC2-207ENST00000522911 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
SDC2-207ENST00000522911 IL13P35225 146 aa12.85□□□□□ -0.35
SDC2-207ENST00000522911 MTHFSP49914 203 aa12.85□□□□□ -0.35
SDC2-207ENST00000522911 CABP4P57796 275 aa12.85□□□□□ -0.35
SDC2-207ENST00000522911 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
SDC2-207ENST00000522911 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
SDC2-207ENST00000522911 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
SDC2-207ENST00000522911 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
SDC2-207ENST00000522911 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
SDC2-207ENST00000522911 C4AP0C0L4 1744 aa12.84□□□□□ -0.35
SDC2-207ENST00000522911 MRC1P22897 1456 aa12.84□□□□□ -0.35
SDC2-207ENST00000522911 RFC4P35249 363 aa12.83□□□□□ -0.36
SDC2-207ENST00000522911 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.36
SDC2-207ENST00000522911 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
SDC2-207ENST00000522911 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
SDC2-207ENST00000522911 HSPA6P17066 643 aa12.82□□□□□ -0.36
SDC2-207ENST00000522911 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
SDC2-207ENST00000522911 NFATC2IPQ8NCF5 419 aa12.82□□□□□ -0.36
SDC2-207ENST00000522911 POLR3GLQ9BT43 218 aa12.82□□□□□ -0.36
SDC2-207ENST00000522911 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
SDC2-207ENST00000522911 USP42Q9H9J4 1324 aaKnown RBP12.82□□□□□ -0.36
SDC2-207ENST00000522911 ADAMTS7Q9UKP4 1686 aa12.81□□□□□ -0.36
SDC2-207ENST00000522911 KIF3CO14782 793 aa12.81□□□□□ -0.36
SDC2-207ENST00000522911 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
SDC2-207ENST00000522911 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
SDC2-207ENST00000522911 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
SDC2-207ENST00000522911 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
SDC2-207ENST00000522911 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
SDC2-207ENST00000522911 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
SDC2-207ENST00000522911 KCNA3P22001 575 aa12.8□□□□□ -0.36
SDC2-207ENST00000522911 SLC52A2Q9HAB3 445 aa12.8□□□□□ -0.36
SDC2-207ENST00000522911 TJP1Q07157 1748 aa12.79□□□□□ -0.36
SDC2-207ENST00000522911 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
SDC2-207ENST00000522911 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
SDC2-207ENST00000522911 TM4SF1P30408 202 aa12.79□□□□□ -0.36
SDC2-207ENST00000522911 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
SDC2-207ENST00000522911 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
SDC2-207ENST00000522911 DPEP1P16444 411 aa12.78□□□□□ -0.36
SDC2-207ENST00000522911 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
SDC2-207ENST00000522911 ARFGEF1Q9Y6D6 1849 aa12.78□□□□□ -0.36
SDC2-207ENST00000522911 FKBP8Q14318 412 aa12.77□□□□□ -0.37
SDC2-207ENST00000522911 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
SDC2-207ENST00000522911 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
SDC2-207ENST00000522911 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
SDC2-207ENST00000522911 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
SDC2-207ENST00000522911 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
SDC2-207ENST00000522911 RNMTO43148 476 aaKnown RBP12.76□□□□□ -0.37
SDC2-207ENST00000522911 TOMM70O94826 608 aa12.76□□□□□ -0.37
SDC2-207ENST00000522911 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
SDC2-207ENST00000522911 DDR1Q08345 913 aa12.76□□□□□ -0.37
SDC2-207ENST00000522911 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
SDC2-207ENST00000522911 FCHSD2O94868 740 aa12.75□□□□□ -0.37
SDC2-207ENST00000522911 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
SDC2-207ENST00000522911 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
SDC2-207ENST00000522911 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
SDC2-207ENST00000522911 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
SDC2-207ENST00000522911 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
SDC2-207ENST00000522911 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
SDC2-207ENST00000522911 DIAPH1O60610 1272 aaKnown RBP12.74□□□□□ -0.37
SDC2-207ENST00000522911 ZPR1O75312 459 aa12.74□□□□□ -0.37
SDC2-207ENST00000522911 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
SDC2-207ENST00000522911 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
SDC2-207ENST00000522911 DNAJC10Q8IXB1 793 aa12.74□□□□□ -0.37
SDC2-207ENST00000522911 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
SDC2-207ENST00000522911 WWC3Q9ULE0 1092 aa12.74□□□□□ -0.37
SDC2-207ENST00000522911 COL3A1P02461 1466 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms