RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ITPK1Q13572 414 aa15.8■□□□□ 0.12
CTNNA1-234ENST00000522227 PIM2Q9P1W9 311 aa15.8■□□□□ 0.12
CTNNA1-234ENST00000522227 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
CTNNA1-234ENST00000522227 CD163L1Q9NR16 1453 aa15.79■□□□□ 0.12
CTNNA1-234ENST00000522227 VEGFAP15692 232 aaPredicted RBP15.79■□□□□ 0.12
CTNNA1-234ENST00000522227 ATP6V1AP38606 617 aa15.79■□□□□ 0.12
CTNNA1-234ENST00000522227 DALRD3Q5D0E6 543 aaKnown RBP15.79■□□□□ 0.12
CTNNA1-234ENST00000522227 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
CTNNA1-234ENST00000522227 CYP27B1O15528 508 aa15.78■□□□□ 0.12
CTNNA1-234ENST00000522227 NLGN1Q8N2Q7 840 aa15.78■□□□□ 0.12
CTNNA1-234ENST00000522227 ITGB4P16144 1822 aa15.78■□□□□ 0.12
CTNNA1-234ENST00000522227 EDC4Q6P2E9 1401 aaKnown RBP15.77■□□□□ 0.12
CTNNA1-234ENST00000522227 CHRNA5P30532 468 aa15.77■□□□□ 0.12
CTNNA1-234ENST00000522227 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
CTNNA1-234ENST00000522227 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
CTNNA1-234ENST00000522227 BRCA1P38398 1863 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 CGNL1Q0VF96 1302 aa15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 ARFGEF1Q9Y6D6 1849 aa15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 AIDAQ96BJ3 306 aa15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 COG3Q96JB2 828 aa15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 ASAP1Q9ULH1 1129 aa15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 RTCBQ9Y3I0 505 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-234ENST00000522227 LBX1P52954 281 aa15.75■□□□□ 0.11
CTNNA1-234ENST00000522227 ABHD8Q96I13 439 aa15.75■□□□□ 0.11
CTNNA1-234ENST00000522227 C4AP0C0L4 1744 aa15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 GYS1P13807 737 aa15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 ARHGEF1Q92888 912 aaKnown RBP15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 ROCK2O75116 1388 aaKnown RBP15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 SBF1O95248 1867 aa15.74■□□□□ 0.11
CTNNA1-234ENST00000522227 RFC4P35249 363 aa15.73■□□□□ 0.11
CTNNA1-234ENST00000522227 MLLT1Q03111 559 aaPredicted RBP15.73■□□□□ 0.11
CTNNA1-234ENST00000522227 TERF2IPQ9NYB0 399 aa15.73■□□□□ 0.11
CTNNA1-234ENST00000522227 TMOD3Q9NYL9 352 aa15.73■□□□□ 0.11
CTNNA1-234ENST00000522227 MAP2P11137 1827 aaKnown RBP15.73■□□□□ 0.11
CTNNA1-234ENST00000522227 CCDC85CA6NKD9 419 aa15.72■□□□□ 0.11
CTNNA1-234ENST00000522227 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
CTNNA1-234ENST00000522227 SMG6Q86US8 1419 aaKnown RBP15.71■□□□□ 0.11
CTNNA1-234ENST00000522227 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
CTNNA1-234ENST00000522227 L3MBTL2Q969R5 705 aa15.7■□□□□ 0.1
CTNNA1-234ENST00000522227 POTECB2RU33 542 aa15.69■□□□□ 0.1
CTNNA1-234ENST00000522227 SRP68Q9UHB9 627 aaKnown RBP15.69■□□□□ 0.1
CTNNA1-234ENST00000522227 POTEIP0CG38 1075 aa15.68■□□□□ 0.1
CTNNA1-234ENST00000522227 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
CTNNA1-234ENST00000522227 LMNB1P20700 586 aa15.68■□□□□ 0.1
CTNNA1-234ENST00000522227 HSP90AB2PQ58FF8 381 aa15.68■□□□□ 0.1
CTNNA1-234ENST00000522227 CFAP44Q96MT7 982 aa15.68■□□□□ 0.1
CTNNA1-234ENST00000522227 ATG3Q9NT62 314 aa15.68■□□□□ 0.1
CTNNA1-234ENST00000522227 CNTNAP1P78357 1384 aa15.67■□□□□ 0.1
CTNNA1-234ENST00000522227 VEGFBP49765 207 aa15.67■□□□□ 0.1
CTNNA1-234ENST00000522227 DDR1Q08345 913 aa15.67■□□□□ 0.1
CTNNA1-234ENST00000522227 RTL1A6NKG5 1358 aa15.66■□□□□ 0.1
CTNNA1-234ENST00000522227 FKBP8Q14318 412 aa15.66■□□□□ 0.1
CTNNA1-234ENST00000522227 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
CTNNA1-234ENST00000522227 ZC3H4Q9UPT8 1303 aaKnown RBP15.66■□□□□ 0.1
CTNNA1-234ENST00000522227 RPS6KA4O75676 772 aa15.65■□□□□ 0.1
CTNNA1-234ENST00000522227 SLC4A9Q96Q91 983 aa15.65■□□□□ 0.1
CTNNA1-234ENST00000522227 HSPA8P11142 646 aaKnown RBP15.64■□□□□ 0.09
CTNNA1-234ENST00000522227 ADRA2BP18089 450 aa15.64■□□□□ 0.09
CTNNA1-234ENST00000522227 NKX1-1Q15270 411 aaPredicted RBP15.64■□□□□ 0.09
CTNNA1-234ENST00000522227 DPY19L2Q6NUT2 758 aa15.64■□□□□ 0.09
CTNNA1-234ENST00000522227 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.09
CTNNA1-234ENST00000522227 WBP1LQ9NX94 342 aa15.64■□□□□ 0.09
CTNNA1-234ENST00000522227 SPG7Q9UQ90 795 aa15.64■□□□□ 0.09
CTNNA1-234ENST00000522227 TIAM2Q8IVF5 1701 aa15.63■□□□□ 0.09
CTNNA1-234ENST00000522227 KDM6AO15550 1401 aaPredicted RBP15.62■□□□□ 0.09
CTNNA1-234ENST00000522227 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
CTNNA1-234ENST00000522227 CCDC88AQ3V6T2 1871 aa15.62■□□□□ 0.09
CTNNA1-234ENST00000522227 RC3H1Q5TC82 1133 aaKnown RBP15.61■□□□□ 0.09
CTNNA1-234ENST00000522227 CNTNAP4Q9C0A0 1308 aa15.6■□□□□ 0.09
CTNNA1-234ENST00000522227 INSRP06213 1382 aa15.6■□□□□ 0.09
CTNNA1-234ENST00000522227 KDRP35968 1356 aa15.6■□□□□ 0.09
CTNNA1-234ENST00000522227 NFKBIEO00221 500 aa15.59■□□□□ 0.09
CTNNA1-234ENST00000522227 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
CTNNA1-234ENST00000522227 TMEM88BA6NKF7 163 aa15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 PPM1GO15355 546 aaPredicted RBP15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 DDNO94850 711 aaPredicted RBP15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 PHKG2P15735 406 aa15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 RGS19P49795 217 aa15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 ERFEQ4G0M1 354 aa15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 IFNL2Q8IZJ0 200 aa15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 USP42Q9H9J4 1324 aaKnown RBP15.58■□□□□ 0.08
CTNNA1-234ENST00000522227 PTCD1O75127 700 aaKnown RBP15.57■□□□□ 0.08
CTNNA1-234ENST00000522227 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
CTNNA1-234ENST00000522227 TTLL6Q8N841 843 aa15.57■□□□□ 0.08
CTNNA1-234ENST00000522227 SIN3AQ96ST3 1273 aa15.57■□□□□ 0.08
CTNNA1-234ENST00000522227 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
CTNNA1-234ENST00000522227 FLT4P35916 1363 aa15.57■□□□□ 0.08
CTNNA1-234ENST00000522227 FYB1O15117 783 aa15.56■□□□□ 0.08
CTNNA1-234ENST00000522227 CRKLP46109 303 aaKnown RBP15.56■□□□□ 0.08
CTNNA1-234ENST00000522227 MYH14Q7Z406 1995 aaKnown RBP15.56■□□□□ 0.08
CTNNA1-234ENST00000522227 PASKQ96RG2 1323 aa15.55■□□□□ 0.08
CTNNA1-234ENST00000522227 TM4SF1P30408 202 aa15.55■□□□□ 0.08
CTNNA1-234ENST00000522227 EAPPQ56P03 285 aaPredicted RBP15.55■□□□□ 0.08
CTNNA1-234ENST00000522227 USPL1Q5W0Q7 1092 aa15.55■□□□□ 0.08
CTNNA1-234ENST00000522227 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
CTNNA1-234ENST00000522227 TSKSQ9UJT2 592 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms