RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LGR5O75473 907 aa8.87□□□□□ -0.99
HMGB1P46-201ENST00000520062 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
HMGB1P46-201ENST00000520062 HELQQ8TDG4 1101 aa8.87□□□□□ -0.99
HMGB1P46-201ENST00000520062 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
HMGB1P46-201ENST00000520062 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
HMGB1P46-201ENST00000520062 DNMT3AQ9Y6K1 912 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P46-201ENST00000520062 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 IFFO2Q5TF58 517 aa8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 TNS4Q8IZW8 715 aa8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 PURBQ96QR8 312 aaKnown RBP8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 EMILIN1Q9Y6C2 1016 aa8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 ATAD2Q6PL18 1390 aa8.86□□□□□ -0.99
HMGB1P46-201ENST00000520062 NPR3P17342 541 aa8.85□□□□□ -0.99
HMGB1P46-201ENST00000520062 FOXK2Q01167 660 aa8.85□□□□□ -0.99
HMGB1P46-201ENST00000520062 ECM1Q16610 540 aa8.85□□□□□ -0.99
HMGB1P46-201ENST00000520062 EMID1Q96A84 441 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P46-201ENST00000520062 ANO2Q9NQ90 1003 aa8.85□□□□□ -0.99
HMGB1P46-201ENST00000520062 ANKRD33BA6NCL7 494 aa8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 SLC19A1P41440 591 aa8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 MTFR1Q15390 333 aa8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 NPAS4Q8IUM7 802 aa8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 VTI1AQ96AJ9 217 aa8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 MRGPRX2Q96LB1 330 aa8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 TSPAN10Q9H1Z9 355 aaPredicted RBP8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 SCHIP1Q9P0W5 487 aaPredicted RBP8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 DCTN4Q9UJW0 460 aa8.84□□□□□ -0.99
HMGB1P46-201ENST00000520062 FAM13AO94988 1023 aa8.83□□□□□ -1
HMGB1P46-201ENST00000520062 NR3C2P08235 984 aa8.83□□□□□ -1
HMGB1P46-201ENST00000520062 ARHGAP4P98171 946 aa8.83□□□□□ -1
HMGB1P46-201ENST00000520062 CAPN12Q6ZSI9 719 aa8.83□□□□□ -1
HMGB1P46-201ENST00000520062 ASB16Q96NS5 453 aa8.83□□□□□ -1
HMGB1P46-201ENST00000520062 SERTAD1Q9UHV2 236 aa8.83□□□□□ -1
HMGB1P46-201ENST00000520062 A6NJY4 79 aa8.82□□□□□ -1
HMGB1P46-201ENST00000520062 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
HMGB1P46-201ENST00000520062 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
HMGB1P46-201ENST00000520062 SMTNP53814 917 aa8.82□□□□□ -1
HMGB1P46-201ENST00000520062 SPNS2Q8IVW8 549 aa8.82□□□□□ -1
HMGB1P46-201ENST00000520062 ZSCAN29Q8IWY8 852 aaPredicted RBP8.82□□□□□ -1
HMGB1P46-201ENST00000520062 XAGE2Q96GT9 111 aa8.82□□□□□ -1
HMGB1P46-201ENST00000520062 BCL2L13Q9BXK5 485 aa8.82□□□□□ -1
HMGB1P46-201ENST00000520062 UNCXA6NJT0 531 aa8.81□□□□□ -1
HMGB1P46-201ENST00000520062 PPP1R12BO60237 982 aaPredicted RBP8.81□□□□□ -1
HMGB1P46-201ENST00000520062 MAPK1P28482 360 aa8.81□□□□□ -1
HMGB1P46-201ENST00000520062 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
HMGB1P46-201ENST00000520062 COL19A1Q14993 1142 aa8.81□□□□□ -1
HMGB1P46-201ENST00000520062 SLC9A9Q8IVB4 645 aa8.81□□□□□ -1
HMGB1P46-201ENST00000520062 C2orf49Q9BVC5 232 aaPredicted RBP8.81□□□□□ -1
HMGB1P46-201ENST00000520062 A0A1W2PRU2 124 aa8.8□□□□□ -1
HMGB1P46-201ENST00000520062 CDK2AP1O14519 115 aa8.8□□□□□ -1
HMGB1P46-201ENST00000520062 ZNF16P17020 682 aaPredicted RBP8.8□□□□□ -1
HMGB1P46-201ENST00000520062 MTMR3Q13615 1198 aa8.8□□□□□ -1
HMGB1P46-201ENST00000520062 NAA30Q147X3 362 aaPredicted RBP8.8□□□□□ -1
HMGB1P46-201ENST00000520062 C16orf46Q6P387 395 aa8.8□□□□□ -1
HMGB1P46-201ENST00000520062 POTEAQ6S8J7 498 aa8.8□□□□□ -1
HMGB1P46-201ENST00000520062 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
HMGB1P46-201ENST00000520062 IL2RAP01589 272 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 ADH1AP07327 375 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 SPRYD7Q5W111 196 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 RGL4Q8IZJ4 473 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 NBPF15Q8N660 670 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 CHMP3Q9Y3E7 222 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 HRH3Q9Y5N1 445 aa8.79□□□□□ -1
HMGB1P46-201ENST00000520062 CLN3Q13286 438 aa8.78□□□□□ -1
HMGB1P46-201ENST00000520062 NNTQ13423 1086 aa8.78□□□□□ -1
HMGB1P46-201ENST00000520062 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
HMGB1P46-201ENST00000520062 CHMP7Q8WUX9 453 aaPredicted RBP8.78□□□□□ -1
HMGB1P46-201ENST00000520062 RBCK1Q9BYM8 510 aa8.78□□□□□ -1
HMGB1P46-201ENST00000520062 HIRAP54198 1017 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 Q6ZVU0 165 aa8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 GIPC2Q8TF65 315 aa8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 CNKSR1Q969H4 720 aa8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 MYO19Q96H55 970 aa8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 RAB6BQ9NRW1 208 aa8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 IQSEC3Q9UPP2 1182 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 WASF2Q9Y6W5 498 aa8.77□□□□□ -1.01
HMGB1P46-201ENST00000520062 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 MPSTP25325 297 aa8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 TLR1Q15399 786 aa8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 ALKBH2Q6NS38 261 aa8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 FBXO33Q7Z6M2 555 aa8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 ZNF598Q86UK7 904 aaKnown RBP8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 MRRFQ96E11 262 aaKnown RBP8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 CITED4Q96RK1 184 aa8.76□□□□□ -1.01
HMGB1P46-201ENST00000520062 NDUFB5O43674 189 aa8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 TEAD4Q15561 434 aa8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 ZNF697Q5TEC3 545 aa8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 KDF1Q8NAX2 398 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 SNIP1Q8TAD8 396 aaKnown RBP8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 SAP130Q9H0E3 1048 aa8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 IGSF5Q9NSI5 407 aa8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 STIM2Q9P246 746 aa8.75□□□□□ -1.01
HMGB1P46-201ENST00000520062 VAMP1P23763 118 aa8.74□□□□□ -1.01
HMGB1P46-201ENST00000520062 PTGIRP43119 386 aa8.74□□□□□ -1.01
HMGB1P46-201ENST00000520062 TBCELQ5QJ74 424 aa8.74□□□□□ -1.01
HMGB1P46-201ENST00000520062 COX20Q5RI15 118 aa8.74□□□□□ -1.01
HMGB1P46-201ENST00000520062 ABTB2Q8N961 1025 aa8.74□□□□□ -1.01
HMGB1P46-201ENST00000520062 QTRT2Q9H974 415 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms