RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM43AQ8N2R8 423 aa6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 NBPF15Q8N660 670 aa6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 ARHGEF10LQ9HCE6 1279 aa6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 PCDHB11Q9Y5F2 797 aa6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 DNMT3AQ9Y6K1 912 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P19-201ENST00000517578 IGF1RP08069 1367 aa6.46□□□□□ -1.37
HMGB1P19-201ENST00000517578 SPATA31C2B4DYI2 1134 aa6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 MCCD1P59942 119 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 RBM10P98175 930 aaKnown RBP6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 MAP3K10Q02779 954 aa6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 HSP90AA2PQ14568 343 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 SLC27A3Q5K4L6 730 aa6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 KANK3Q6NY19 840 aa6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 NLRP3Q96P20 1036 aa6.46□□□□□ -1.38
HMGB1P19-201ENST00000517578 BRD2P25440 801 aaKnown RBP6.45□□□□□ -1.38
HMGB1P19-201ENST00000517578 GTPBP3Q969Y2 492 aaKnown RBP6.45□□□□□ -1.38
HMGB1P19-201ENST00000517578 SCARF2Q96GP6 870 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P19-201ENST00000517578 GAS2L1Q99501 681 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P19-201ENST00000517578 RAB6BQ9NRW1 208 aa6.45□□□□□ -1.38
HMGB1P19-201ENST00000517578 NDUFB9Q9Y6M9 179 aa6.45□□□□□ -1.38
HMGB1P19-201ENST00000517578 WASHC2CQ9Y4E1 1318 aa6.45□□□□□ -1.38
HMGB1P19-201ENST00000517578 H7C1W4 665 aa6.44□□□□□ -1.38
HMGB1P19-201ENST00000517578 APBB1O00213 710 aa6.44□□□□□ -1.38
HMGB1P19-201ENST00000517578 PPM1GO15355 546 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P19-201ENST00000517578 THBS1P07996 1170 aa6.44□□□□□ -1.38
HMGB1P19-201ENST00000517578 WASLO00401 505 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 IL2RAP01589 272 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 ANP32AP39687 249 aaKnown RBP6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 WDR44Q5JSH3 913 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 GPAT2Q6NUI2 795 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 FOXR1Q6PIV2 292 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 ZNF592Q92610 1267 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 ACDQ96AP0 544 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 CCDC85AQ96PX6 553 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 CDCA7Q9BWT1 371 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 ZNF330Q9Y3S2 320 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 HRH3Q9Y5N1 445 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 WASHC2AQ641Q2 1341 aa6.43□□□□□ -1.38
HMGB1P19-201ENST00000517578 HSP90AA1P07900 732 aaKnown RBP6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 BCRP11274 1271 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 TAS1R3Q7RTX0 852 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 ESYT1Q9BSJ8 1104 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 PRM3Q9NNZ6 103 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 TIMMDC1Q9NPL8 285 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 ENAMQ9NRM1 1142 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 CEP126Q9P2H0 1117 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 TBC1D2BQ9UPU7 963 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 CNTNAP5Q8WYK1 1306 aa6.42□□□□□ -1.38
HMGB1P19-201ENST00000517578 GNRH1P01148 92 aa6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 F11P03951 625 aa6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 CENPCQ03188 943 aa6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 MCM6Q14566 821 aa6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 CNKSR1Q969H4 720 aa6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 NAP1L5Q96NT1 182 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 TRERF1Q96PN7 1200 aa6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 NUCKS1Q9H1E3 243 aaKnown RBP6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 CENPJQ9HC77 1338 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P19-201ENST00000517578 IGHA1P01876 353 aa6.4□□□□□ -1.38
HMGB1P19-201ENST00000517578 MX2P20592 715 aa6.4□□□□□ -1.38
HMGB1P19-201ENST00000517578 ABL2P42684 1182 aa6.4□□□□□ -1.38
HMGB1P19-201ENST00000517578 FOXK2Q01167 660 aa6.4□□□□□ -1.38
HMGB1P19-201ENST00000517578 FHDC1Q9C0D6 1143 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P19-201ENST00000517578 GDPD2Q9HCC8 539 aa6.4□□□□□ -1.38
HMGB1P19-201ENST00000517578 BCCIPQ9P287 314 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P19-201ENST00000517578 A0A0U1RQG5 324 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 ITGB2P05107 769 aa6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 CALD1Q05682 793 aaKnown RBP6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 UBAP2LQ14157 1087 aaKnown RBP6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 TSGA10IPQ3SY00 556 aa6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 IPO9Q96P70 1041 aaKnown RBP6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 LRRC4BQ9NT99 713 aa6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 TIMELESSQ9UNS1 1208 aa6.39□□□□□ -1.39
HMGB1P19-201ENST00000517578 PHKA2P46019 1235 aa6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 CNGB1Q14028 1251 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 PLA2G4EQ3MJ16 856 aa6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 NEDD1Q8NHV4 660 aa6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 XAGE2Q96GT9 111 aa6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 DCAF5Q96JK2 942 aa6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 ZSCAN10Q96SZ4 725 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 ESF1Q9H501 851 aaKnown RBP6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 GPAMQ9HCL2 828 aa6.38□□□□□ -1.39
HMGB1P19-201ENST00000517578 A0A1B0GTH6 734 aa6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 PHF20L1A8MW92 1017 aa6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 OIP5O43482 229 aa6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 STAU1O95793 577 aaKnown RBP6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 MYCP01106 439 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 NEFMP07197 916 aa6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 HSP90B1P14625 803 aaKnown RBP6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 C4orf17Q53FE4 359 aa6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 PHTF2Q8N3S3 785 aa6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 CFHR5Q9BXR6 569 aa6.37□□□□□ -1.39
HMGB1P19-201ENST00000517578 FLIIQ13045 1269 aa6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 IRF5Q13568 498 aa6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 C1orf229Q6ZS94 237 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 BEND7Q8N7W2 519 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 ANP32BQ92688 251 aaKnown RBP6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 OXCT2Q9BYC2 517 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 ETNK1Q9HBU6 452 aa6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 NSFL1CQ9UNZ2 370 aaKnown RBP6.36□□□□□ -1.39
HMGB1P19-201ENST00000517578 ARID4BQ4LE39 1312 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms