RNA–Protein interactions for RNA: ENST00000517015.1

SNORA48.11-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 89 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.11-201ENST00000517015 SERTAD1Q9UHV2 236 aa3.58□□□□□ -1.84
SNORA48.11-201ENST00000517015 ERVH48-1M5A8F1 160 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 SCAMP3O14828 347 aaKnown RBP3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 TREHO43280 583 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 FAM13AO94988 1023 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 LDHBP07195 334 aaKnown RBP3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 EIF1AXP47813 144 aaKnown RBP3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 GDF10P55107 478 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 COL19A1Q14993 1142 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 SF3A1Q15459 793 aaKnown RBP3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 FAM26DQ5JW98 314 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 ANKRD13DQ6ZTN6 518 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 PIK3R5Q8WYR1 880 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 ZNF516Q92618 1163 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 COL26A1Q96A83 441 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 VTI1AQ96AJ9 217 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 KCTD15Q96SI1 283 aaPredicted RBP3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 DUSP9Q99956 384 aaKnown RBP3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 BCL11AQ9H165 835 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 TMPRSS4Q9NRS4 437 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 PARP2Q9UGN5 583 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 BRPF3Q9ULD4 1205 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 WWC3Q9ULE0 1092 aa3.57□□□□□ -1.84
SNORA48.11-201ENST00000517015 A0A1W2PRU2 124 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 TNFRSF10BO14763 440 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 FZD6O60353 706 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 NPR3P17342 541 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 EPHA4P54764 986 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 SH3BP2P78314 561 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 XPCQ01831 940 aaPredicted RBP3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 EHHADHQ08426 723 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 AAMPQ13685 434 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 C16orf46Q6P387 395 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 ATCAYQ86WG3 371 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 NT5DC4Q86YG4 428 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 TRMT44Q8IYL2 757 aaKnown RBP3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 SEPT12Q8IYM1 358 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 TMEM87AQ8NBN3 555 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 PRKD2Q9BZL6 878 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 OSBPL3Q9H4L5 887 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 ETNK1Q9HBU6 452 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 MRS2Q9HD23 443 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 RAB6BQ9NRW1 208 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 VTI1BQ9UEU0 232 aa3.56□□□□□ -1.84
SNORA48.11-201ENST00000517015 ATAD2Q6PL18 1390 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 PPP1R12BO60237 982 aaPredicted RBP3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 PRPF40AO75400 957 aaKnown RBP3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 IGHA2P01877 340 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 FSHRP23945 695 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 ERVK-9P63128 1117 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 FANCCQ00597 558 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 DSC3Q14574 896 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 COX20Q5RI15 118 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 CC2D2BQ6DHV5 1058 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 THSD4Q6ZMP0 1018 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 VASH1Q7L8A9 365 aaPredicted RBP3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 METTL16Q86W50 562 aaKnown RBP3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 SLC9A9Q8IVB4 645 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 NKX2-3Q8TAU0 364 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 SPATA32Q96LK8 384 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 DNAJC2Q99543 621 aaKnown RBP3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 TINF2Q9BSI4 451 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 QTRT2Q9H974 415 aaKnown RBP3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 USP3Q9Y6I4 520 aa3.55□□□□□ -1.84
SNORA48.11-201ENST00000517015 PNMA6FA0A0J9YX94 578 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 PPEF1O14829 653 aaPredicted RBP3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 ZBTB39O15060 712 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 SORBS3O60504 671 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 INHAP05111 366 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 TNNI2P48788 182 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 PSMD2Q13200 908 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 ARID5BQ14865 1188 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 SH3PXD2AQ5TCZ1 1133 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 GIMAP6Q6P9H5 292 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 ZNF784Q8NCA9 323 aaPredicted RBP3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 DHX38Q92620 1227 aaKnown RBP3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 KCTD12Q96CX2 325 aaKnown RBP3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 NGLY1Q96IV0 654 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 FAM129BQ96TA1 746 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 TANGO6Q9C0B7 1094 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 ACBD3Q9H3P7 528 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 ESF1Q9H501 851 aaKnown RBP3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 CCSER2Q9H7U1 834 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 CAPN10Q9HC96 672 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 CDV3Q9UKY7 258 aaKnown RBP3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 LRFN2Q9ULH4 789 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 IQSEC3Q9UPP2 1182 aaPredicted RBP3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 TLL2Q9Y6L7 1015 aa3.54□□□□□ -1.84
SNORA48.11-201ENST00000517015 WASLO00401 505 aaPredicted RBP3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 BACH1O14867 736 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 PPM1GO15355 546 aaPredicted RBP3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 SKOR1P84550 965 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 DAB2P98082 770 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 FOXK2Q01167 660 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 ATP2B2Q01814 1243 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 PLCB3Q01970 1234 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 TRIM32Q13049 653 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 TJAP1Q5JTD0 557 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 DPH6Q7L8W6 267 aa3.53□□□□□ -1.84
SNORA48.11-201ENST00000517015 TMC4Q7Z404 712 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms