RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 METTL3Q86U44 580 aaKnown RBP7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 NLRP7Q8WX94 980 aa7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 C8orf37Q96NL8 207 aa7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 FAM217BQ9NTX9 383 aaPredicted RBP7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 KNSTRNQ9Y448 316 aa7.93□□□□□ -1.14
SCARNA6.1-201ENST00000516989 ITSN1Q15811 1721 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 FYB1O15117 783 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 TRAK2O60296 914 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 GCP02774 474 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 FOSBP53539 338 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 PADI6Q6TGC4 694 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 COG3Q96JB2 828 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 GGNBP2Q9H3C7 697 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CD163L1Q9NR16 1453 aa7.92□□□□□ -1.14
SCARNA6.1-201ENST00000516989 FAM83GA6ND36 823 aa7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 DDX10Q13206 875 aaKnown RBP7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 MCM6Q14566 821 aa7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 KCNH5Q8NCM2 988 aa7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 PXYLP1Q8TE99 480 aa7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 PRDM11Q9NQV5 511 aa7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 ADGRG1Q9Y653 693 aa7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 EDC4Q6P2E9 1401 aaKnown RBP7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 SSH2Q76I76 1423 aa7.91□□□□□ -1.14
SCARNA6.1-201ENST00000516989 TOPAZ1Q8N9V7 1692 aa7.9□□□□□ -1.14
SCARNA6.1-201ENST00000516989 NSD3Q9BZ95 1437 aa7.9□□□□□ -1.14
SCARNA6.1-201ENST00000516989 FBLN1P23142 703 aa7.9□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CHRNA2Q15822 529 aa7.9□□□□□ -1.14
SCARNA6.1-201ENST00000516989 PODXL2Q9NZ53 605 aa7.9□□□□□ -1.14
SCARNA6.1-201ENST00000516989 CGNL1Q0VF96 1302 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 POTEIP0CG38 1075 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 TNNT2P45379 298 aaPredicted RBP7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 EVA1CP58658 441 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 CC2D1BQ5T0F9 858 aaKnown RBP7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 MORC1Q86VD1 984 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 ZNF454Q8N9F8 522 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 TTC13Q8NBP0 860 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 USP21Q9UK80 565 aa7.89□□□□□ -1.15
SCARNA6.1-201ENST00000516989 USP31Q70CQ4 1352 aa7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 KIAA0232Q92628 1395 aa7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 AFF2P51816 1311 aa7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 PER1O15534 1290 aaPredicted RBP7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 ZNF772Q68DY9 489 aaPredicted RBP7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 FNBP4Q8N3X1 1017 aaPredicted RBP7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 BTG4Q9NY30 223 aa7.88□□□□□ -1.15
SCARNA6.1-201ENST00000516989 TRPM3Q9HCF6 1732 aaPredicted RBP7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 USP19O94966 1318 aa7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 PPM1GO15355 546 aaPredicted RBP7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 AMPHP49418 695 aa7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 ARHGEF25Q86VW2 580 aa7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 STRN4Q9NRL3 753 aa7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 RGS17Q9UGC6 210 aaPredicted RBP7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 CCDC9Q9Y3X0 531 aaKnown RBP7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 LRP6O75581 1613 aa7.87□□□□□ -1.15
SCARNA6.1-201ENST00000516989 SHPRHQ149N8 1683 aa7.86□□□□□ -1.15
SCARNA6.1-201ENST00000516989 CSB-PGBD3P0DP91 1061 aa7.86□□□□□ -1.15
SCARNA6.1-201ENST00000516989 RRS1Q15050 365 aaKnown RBP7.86□□□□□ -1.15
SCARNA6.1-201ENST00000516989 UNC5CLQ8IV45 518 aa7.86□□□□□ -1.15
SCARNA6.1-201ENST00000516989 TBC1D2Q9BYX2 928 aa7.86□□□□□ -1.15
SCARNA6.1-201ENST00000516989 RBM27Q9P2N5 1060 aaKnown RBP7.86□□□□□ -1.15
SCARNA6.1-201ENST00000516989 AKAP12Q02952 1782 aa7.86□□□□□ -1.15
SCARNA6.1-201ENST00000516989 RAD21O60216 631 aa7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 CLK2P49760 499 aaKnown RBP7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 PRSS12P56730 875 aa7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 CCDC82Q8N4S0 544 aa7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 RBM46Q8TBY0 533 aaKnown RBP7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 LTV1Q96GA3 475 aaPredicted RBP7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 POM121Q96HA1 1249 aa7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 ADAM33Q9BZ11 813 aa7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 TRPC5Q9UL62 973 aaPredicted RBP7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 AXIN2Q9Y2T1 843 aa7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 ALS2Q96Q42 1657 aa7.85□□□□□ -1.15
SCARNA6.1-201ENST00000516989 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 MON2Q7Z3U7 1717 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 NUDT7P0C024 238 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 RXRBP28702 533 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 POTEAQ6S8J7 498 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 TOM1L2Q6ZVM7 507 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 IP6K1Q92551 441 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 KHSRPQ92945 711 aaKnown RBP eCLIP7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 CDCA7LQ96GN5 454 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 USP35Q9P2H5 1018 aa7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 COL22A1Q8NFW1 1626 aaPredicted RBP7.84□□□□□ -1.15
SCARNA6.1-201ENST00000516989 CPDO75976 1380 aa7.84□□□□□ -1.16
SCARNA6.1-201ENST00000516989 MAP3K19Q56UN5 1328 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 RBM6P78332 1123 aaKnown RBP7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 DIXDC1Q155Q3 683 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 ARSIQ5FYB1 569 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 LARP1Q6PKG0 1096 aaKnown RBP7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 GJD4Q96KN9 370 aaPredicted RBP7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 POLKQ9UBT6 870 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 OVOS2A0A0J9YW53 1432 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 OVOS2Q6IE36 1432 aa7.83□□□□□ -1.16
SCARNA6.1-201ENST00000516989 AATKQ6ZMQ8 1374 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms