RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 TMEM229AB2RXF0 380 aa9.52□□□□□ -0.89
PHF3-211ENST00000514822 VSIG8P0DPA2 414 aa9.52□□□□□ -0.89
PHF3-211ENST00000514822 ITGA6P23229 1130 aa9.52□□□□□ -0.89
PHF3-211ENST00000514822 GNASQ5JWF2 1037 aa9.52□□□□□ -0.89
PHF3-211ENST00000514822 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
PHF3-211ENST00000514822 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
PHF3-211ENST00000514822 NBPF15Q8N660 670 aa9.52□□□□□ -0.89
PHF3-211ENST00000514822 MKRN1Q9UHC7 482 aaKnown RBP9.52□□□□□ -0.89
PHF3-211ENST00000514822 ERBB4Q15303 1308 aa9.52□□□□□ -0.89
PHF3-211ENST00000514822 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
PHF3-211ENST00000514822 BACH1O14867 736 aa9.5□□□□□ -0.89
PHF3-211ENST00000514822 RHBDD1Q8TEB9 315 aa9.5□□□□□ -0.89
PHF3-211ENST00000514822 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
PHF3-211ENST00000514822 TIMMDC1Q9NPL8 285 aa9.5□□□□□ -0.89
PHF3-211ENST00000514822 DYRK1BQ9Y463 629 aa9.5□□□□□ -0.89
PHF3-211ENST00000514822 WIPF1O43516 503 aa9.49□□□□□ -0.89
PHF3-211ENST00000514822 SMTNP53814 917 aa9.49□□□□□ -0.89
PHF3-211ENST00000514822 PPARGC1BQ86YN6 1023 aaKnown RBP9.49□□□□□ -0.89
PHF3-211ENST00000514822 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
PHF3-211ENST00000514822 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
PHF3-211ENST00000514822 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
PHF3-211ENST00000514822 DNAAF2Q9NVR5 837 aaKnown RBP9.49□□□□□ -0.89
PHF3-211ENST00000514822 CDC14CA4D256 554 aa9.48□□□□□ -0.89
PHF3-211ENST00000514822 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
PHF3-211ENST00000514822 GMPRP36959 345 aa9.48□□□□□ -0.89
PHF3-211ENST00000514822 CLDN10P78369 228 aa9.48□□□□□ -0.89
PHF3-211ENST00000514822 LARGE2Q8N3Y3 721 aa9.48□□□□□ -0.89
PHF3-211ENST00000514822 TPCN2Q8NHX9 752 aa9.48□□□□□ -0.89
PHF3-211ENST00000514822 GAS2L1Q99501 681 aaPredicted RBP9.48□□□□□ -0.89
PHF3-211ENST00000514822 ZNF358Q9NW07 568 aa9.48□□□□□ -0.89
PHF3-211ENST00000514822 A6NJY4 79 aa9.47□□□□□ -0.89
PHF3-211ENST00000514822 ZBTB7BO15156 539 aaPredicted RBP9.47□□□□□ -0.89
PHF3-211ENST00000514822 PHKA2P46019 1235 aa9.47□□□□□ -0.89
PHF3-211ENST00000514822 C4orf17Q53FE4 359 aa9.47□□□□□ -0.89
PHF3-211ENST00000514822 CCDC102BQ68D86 513 aa9.47□□□□□ -0.89
PHF3-211ENST00000514822 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
PHF3-211ENST00000514822 RBM19Q9Y4C8 960 aaKnown RBP9.47□□□□□ -0.89
PHF3-211ENST00000514822 RASA1P20936 1047 aa9.46□□□□□ -0.9
PHF3-211ENST00000514822 MTFR1Q15390 333 aa9.46□□□□□ -0.9
PHF3-211ENST00000514822 RIPOR1Q6ZS17 1223 aa9.46□□□□□ -0.9
PHF3-211ENST00000514822 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.9
PHF3-211ENST00000514822 GMCL1Q96IK5 515 aa9.46□□□□□ -0.9
PHF3-211ENST00000514822 KIAA1024Q9UPX6 916 aa9.46□□□□□ -0.9
PHF3-211ENST00000514822 A0A1B0GTH6 734 aa9.45□□□□□ -0.9
PHF3-211ENST00000514822 H7C1W4 665 aa9.45□□□□□ -0.9
PHF3-211ENST00000514822 LARP1Q6PKG0 1096 aaKnown RBP9.45□□□□□ -0.9
PHF3-211ENST00000514822 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
PHF3-211ENST00000514822 NIFKQ9BYG3 293 aaKnown RBP9.45□□□□□ -0.9
PHF3-211ENST00000514822 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
PHF3-211ENST00000514822 F11P03951 625 aa9.44□□□□□ -0.9
PHF3-211ENST00000514822 SIX5Q8N196 739 aa9.44□□□□□ -0.9
PHF3-211ENST00000514822 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
PHF3-211ENST00000514822 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
PHF3-211ENST00000514822 PLA2G4AP47712 749 aa9.43□□□□□ -0.9
PHF3-211ENST00000514822 INSM1Q01101 510 aaPredicted RBP9.43□□□□□ -0.9
PHF3-211ENST00000514822 CFAP70Q5T0N1 1121 aa9.43□□□□□ -0.9
PHF3-211ENST00000514822 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
PHF3-211ENST00000514822 TRIM22Q8IYM9 498 aa9.43□□□□□ -0.9
PHF3-211ENST00000514822 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
PHF3-211ENST00000514822 CUEDC1Q9NWM3 386 aaPredicted RBP9.43□□□□□ -0.9
PHF3-211ENST00000514822 M0R2N6 131 aa9.42□□□□□ -0.9
PHF3-211ENST00000514822 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
PHF3-211ENST00000514822 CABP1Q9NZU7 370 aa9.42□□□□□ -0.9
PHF3-211ENST00000514822 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
PHF3-211ENST00000514822 IQSEC3Q9UPP2 1182 aaPredicted RBP9.42□□□□□ -0.9
PHF3-211ENST00000514822 DBN1Q16643 649 aa9.41□□□□□ -0.9
PHF3-211ENST00000514822 GPAMQ9HCL2 828 aa9.41□□□□□ -0.9
PHF3-211ENST00000514822 FAM196BA6NMK8 535 aa9.4□□□□□ -0.9
PHF3-211ENST00000514822 CSB-PGBD3P0DP91 1061 aa9.4□□□□□ -0.9
PHF3-211ENST00000514822 EPHA4P54764 986 aa9.4□□□□□ -0.9
PHF3-211ENST00000514822 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
PHF3-211ENST00000514822 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
PHF3-211ENST00000514822 PGBD3Q8N328 593 aa9.4□□□□□ -0.9
PHF3-211ENST00000514822 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
PHF3-211ENST00000514822 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
PHF3-211ENST00000514822 USP3Q9Y6I4 520 aa9.4□□□□□ -0.9
PHF3-211ENST00000514822 SFI1A8K8P3 1242 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L15C9J2P7 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L10C9JJH3 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L13C9JLJ4 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L11C9JVI0 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L21D6R901 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L18D6R9N7 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L22D6RA61 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L17D6RBQ6 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L19D6RCP7 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L20D6RJB6 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 DKK1O94907 266 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 RFX1P22670 979 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 MSX1P28360 303 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 SEC13P55735 322 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 USP17L24Q0WX57 530 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 PTK7Q13308 1070 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 NBPF1Q3BBV0 1214 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
PHF3-211ENST00000514822 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
PHF3-211ENST00000514822 CCDC97Q96F63 343 aaPredicted RBP9.39□□□□□ -0.91
PHF3-211ENST00000514822 FOXK2Q01167 660 aa9.38□□□□□ -0.91
PHF3-211ENST00000514822 LBRQ14739 615 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms