RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 ATP6V1AP38606 617 aa34.55■■■■□ 3.12
CLDND1-226ENST00000513287 YBX3P16989 372 aaKnown RBP eCLIP34.54■■■■□ 3.12
CLDND1-226ENST00000513287 MORC1Q86VD1 984 aa34.54■■■■□ 3.12
CLDND1-226ENST00000513287 PELP1Q8IZL8 1130 aaKnown RBP34.54■■■■□ 3.12
CLDND1-226ENST00000513287 ITPK1Q13572 414 aa34.53■■■■□ 3.12
CLDND1-226ENST00000513287 KNSTRNQ9Y448 316 aa34.52■■■■□ 3.12
CLDND1-226ENST00000513287 KDRP35968 1356 aa34.51■■■■□ 3.12
CLDND1-226ENST00000513287 PHF14O94880 888 aa34.49■■■■□ 3.11
CLDND1-226ENST00000513287 RC3H1Q5TC82 1133 aaKnown RBP34.48■■■■□ 3.11
CLDND1-226ENST00000513287 GNPATO15228 680 aa34.47■■■■□ 3.11
CLDND1-226ENST00000513287 C1QTNF8P60827 252 aa34.45■■■■□ 3.11
CLDND1-226ENST00000513287 ZNF530Q6P9A1 599 aaPredicted RBP34.45■■■■□ 3.11
CLDND1-226ENST00000513287 KDM6AO15550 1401 aaPredicted RBP34.44■■■■□ 3.1
CLDND1-226ENST00000513287 ADRA2BP18089 450 aa34.43■■■■□ 3.1
CLDND1-226ENST00000513287 AMER1Q5JTC6 1135 aaPredicted RBP34.43■■■■□ 3.1
CLDND1-226ENST00000513287 SLC4A9Q96Q91 983 aa34.43■■■■□ 3.1
CLDND1-226ENST00000513287 IL13P35225 146 aa34.42■■■■□ 3.1
CLDND1-226ENST00000513287 SMIM5Q71RC9 77 aa34.42■■■■□ 3.1
CLDND1-226ENST00000513287 RTCBQ9Y3I0 505 aaKnown RBP34.42■■■■□ 3.1
CLDND1-226ENST00000513287 CNTNAP4Q9C0A0 1308 aa34.41■■■■□ 3.1
CLDND1-226ENST00000513287 CABP4P57796 275 aa34.41■■■■□ 3.1
CLDND1-226ENST00000513287 COL5A3P25940 1745 aaPredicted RBP34.41■■■■□ 3.1
CLDND1-226ENST00000513287 MTHFSP49914 203 aa34.4■■■■□ 3.1
CLDND1-226ENST00000513287 C1orf141Q5JVX7 400 aa34.4■■■■□ 3.1
CLDND1-226ENST00000513287 TRAPPC3LQ5T215 181 aa34.4■■■■□ 3.1
CLDND1-226ENST00000513287 SULT6B1Q6IMI4 303 aa34.39■■■■□ 3.1
CLDND1-226ENST00000513287 AEBP1Q8IUX7 1158 aa34.39■■■■□ 3.1
CLDND1-226ENST00000513287 NLGN1Q8N2Q7 840 aa34.39■■■■□ 3.1
CLDND1-226ENST00000513287 RBM42Q9BTD8 480 aaKnown RBP34.37■■■■□ 3.09
CLDND1-226ENST00000513287 RPS6KA4O75676 772 aa34.36■■■■□ 3.09
CLDND1-226ENST00000513287 KIF7Q2M1P5 1343 aa34.35■■■■□ 3.09
CLDND1-226ENST00000513287 KIF13BQ9NQT8 1826 aa34.35■■■■□ 3.09
CLDND1-226ENST00000513287 GIGYF1O75420 1035 aaPredicted RBP34.35■■■■□ 3.09
CLDND1-226ENST00000513287 CICQ96RK0 1608 aaPredicted RBP34.33■■■■□ 3.09
CLDND1-226ENST00000513287 PER1O15534 1290 aaPredicted RBP34.33■■■■□ 3.09
CLDND1-226ENST00000513287 MMP10P09238 476 aa34.32■■■■□ 3.08
CLDND1-226ENST00000513287 NFATC2IPQ8NCF5 419 aa34.32■■■■□ 3.08
CLDND1-226ENST00000513287 ARHGEF1Q92888 912 aaKnown RBP34.32■■■■□ 3.08
CLDND1-226ENST00000513287 SCN11AQ9UI33 1791 aa34.31■■■■□ 3.08
CLDND1-226ENST00000513287 MYH14Q7Z406 1995 aaKnown RBP34.31■■■■□ 3.08
CLDND1-226ENST00000513287 AKAP4Q5JQC9 854 aa34.31■■■■□ 3.08
CLDND1-226ENST00000513287 TGFB2P61812 414 aa34.3■■■■□ 3.08
CLDND1-226ENST00000513287 ADCY9O60503 1353 aa34.29■■■■□ 3.08
CLDND1-226ENST00000513287 GYS1P13807 737 aa34.27■■■■□ 3.08
CLDND1-226ENST00000513287 RFC4P35249 363 aa34.27■■■■□ 3.08
CLDND1-226ENST00000513287 ATP10DQ9P241 1426 aa34.25■■■■□ 3.07
CLDND1-226ENST00000513287 NPC1L1Q9UHC9 1359 aa34.24■■■■□ 3.07
CLDND1-226ENST00000513287 PTCD1O75127 700 aaKnown RBP34.24■■■■□ 3.07
CLDND1-226ENST00000513287 SENP3-EIF4A1A0A087X0R7 540 aa34.23■■■■□ 3.07
CLDND1-226ENST00000513287 C10orf71Q711Q0 1435 aa34.22■■■■□ 3.07
CLDND1-226ENST00000513287 PXDNLA1KZ92 1463 aa34.22■■■■□ 3.07
CLDND1-226ENST00000513287 KIAA1551Q9HCM1 1747 aa34.22■■■■□ 3.07
CLDND1-226ENST00000513287 CRKLP46109 303 aaKnown RBP34.22■■■■□ 3.07
CLDND1-226ENST00000513287 SLC52A2Q9HAB3 445 aa34.22■■■■□ 3.07
CLDND1-226ENST00000513287 C4AP0C0L4 1744 aa34.21■■■■□ 3.07
CLDND1-226ENST00000513287 CCDC87Q9NVE4 849 aa34.21■■■■□ 3.07
CLDND1-226ENST00000513287 MRC1P22897 1456 aa34.2■■■■□ 3.07
CLDND1-226ENST00000513287 TJP1Q07157 1748 aa34.2■■■■□ 3.07
CLDND1-226ENST00000513287 DIAPH1O60610 1272 aaKnown RBP34.18■■■■□ 3.06
CLDND1-226ENST00000513287 PARP3Q9Y6F1 533 aa34.18■■■■□ 3.06
CLDND1-226ENST00000513287 ADAMTS7Q9UKP4 1686 aa34.18■■■■□ 3.06
CLDND1-226ENST00000513287 GPBP1L1Q9HC44 474 aaPredicted RBP34.17■■■■□ 3.06
CLDND1-226ENST00000513287 RNMTO43148 476 aaKnown RBP34.16■■■■□ 3.06
CLDND1-226ENST00000513287 LGR6Q9HBX8 967 aa34.16■■■■□ 3.06
CLDND1-226ENST00000513287 USP42Q9H9J4 1324 aaKnown RBP34.15■■■■□ 3.06
CLDND1-226ENST00000513287 INTS5Q6P9B9 1019 aaKnown RBP34.15■■■■□ 3.06
CLDND1-226ENST00000513287 VIRMAQ69YN4 1812 aaKnown RBP34.14■■■■□ 3.06
CLDND1-226ENST00000513287 N4BP2Q86UW6 1770 aaPredicted RBP34.13■■■■□ 3.05
CLDND1-226ENST00000513287 HMOX1P09601 288 aa34.13■■■■□ 3.05
CLDND1-226ENST00000513287 MTHFSDQ2M296 383 aaKnown RBP34.12■■■■□ 3.05
CLDND1-226ENST00000513287 VSIG10Q8N0Z9 540 aa34.12■■■■□ 3.05
CLDND1-226ENST00000513287 BRCA1P38398 1863 aaKnown RBP34.12■■■■□ 3.05
CLDND1-226ENST00000513287 A0A0G2JLW4 131 aa34.11■■■■□ 3.05
CLDND1-226ENST00000513287 CC2D1BQ5T0F9 858 aaKnown RBP34.11■■■■□ 3.05
CLDND1-226ENST00000513287 DNAJC10Q8IXB1 793 aa34.08■■■■□ 3.05
CLDND1-226ENST00000513287 WWC3Q9ULE0 1092 aa34.08■■■■□ 3.05
CLDND1-226ENST00000513287 CYP19A1P11511 503 aaPredicted RBP34.07■■■■□ 3.04
CLDND1-226ENST00000513287 DPEP1P16444 411 aa34.07■■■■□ 3.04
CLDND1-226ENST00000513287 KCNA3P22001 575 aa34.07■■■■□ 3.04
CLDND1-226ENST00000513287 TM4SF1P30408 202 aa34.07■■■■□ 3.04
CLDND1-226ENST00000513287 FKBP8Q14318 412 aa34.07■■■■□ 3.04
CLDND1-226ENST00000513287 BCS1LQ9Y276 419 aa34.07■■■■□ 3.04
CLDND1-226ENST00000513287 SOS1Q07889 1333 aaPredicted RBP34.06■■■■□ 3.04
CLDND1-226ENST00000513287 KCPQ6ZWJ8 1503 aa34.06■■■■□ 3.04
CLDND1-226ENST00000513287 SRP68Q9UHB9 627 aaKnown RBP34.06■■■■□ 3.04
CLDND1-226ENST00000513287 COL3A1P02461 1466 aaPredicted RBP34.06■■■■□ 3.04
CLDND1-226ENST00000513287 ARFGEF1Q9Y6D6 1849 aa34.04■■■■□ 3.04
CLDND1-226ENST00000513287 ZPR1O75312 459 aa34.03■■■■□ 3.04
CLDND1-226ENST00000513287 SLC39A6Q13433 755 aa34.03■■■■□ 3.04
CLDND1-226ENST00000513287 DDR1Q08345 913 aa34.02■■■■□ 3.04
CLDND1-226ENST00000513287 PIM2Q9P1W9 311 aa34.02■■■■□ 3.04
CLDND1-226ENST00000513287 UBR2Q8IWV8 1755 aa34.02■■■■□ 3.04
CLDND1-226ENST00000513287 NARFQ9UHQ1 456 aa34.01■■■■□ 3.03
CLDND1-226ENST00000513287 POLRMTO00411 1230 aaKnown RBP34■■■■□ 3.03
CLDND1-226ENST00000513287 FCHSD2O94868 740 aa34■■■■□ 3.03
CLDND1-226ENST00000513287 GAS2L2Q8NHY3 880 aa34■■■■□ 3.03
CLDND1-226ENST00000513287 USPL1Q5W0Q7 1092 aa33.97■■■■□ 3.03
CLDND1-226ENST00000513287 ARHGAP27Q6ZUM4 889 aa33.97■■■■□ 3.03
CLDND1-226ENST00000513287 ZNF526Q8TF50 670 aaPredicted RBP33.97■■■■□ 3.03
CLDND1-226ENST00000513287 COL15A1P39059 1388 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms