RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 FAM117AQ9C073 453 aa4.8□□□□□ -1.64
HMGB3P3-201ENST00000510526 ATXN7L1Q9ULK2 861 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P3-201ENST00000510526 SHISA8B8ZZ34 492 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 GNB5O14775 395 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 FURINP09958 794 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 FBXO45P0C2W1 286 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 AMPD1P23109 780 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 EFHC2Q5JST6 749 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 GNASQ5JWF2 1037 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 CNKSR1Q969H4 720 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 ESYT1Q9BSJ8 1104 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 ARHGEF10LQ9HCE6 1279 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 NOP53Q9NZM5 478 aaKnown RBP4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 PCDHB11Q9Y5F2 797 aa4.79□□□□□ -1.64
HMGB3P3-201ENST00000510526 MYCP01106 439 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 BMP4P12644 408 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 COL8A1P27658 744 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 CENPCQ03188 943 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 GRIN2CQ14957 1233 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 SLCO4C1Q6ZQN7 724 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 ZSCAN10Q96SZ4 725 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 OSBPL3Q9H4L5 887 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 GPAMQ9HCL2 828 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 GOPCQ9HD26 462 aa4.78□□□□□ -1.64
HMGB3P3-201ENST00000510526 SCTRP47872 440 aa4.77□□□□□ -1.65
HMGB3P3-201ENST00000510526 NR1H3Q13133 447 aa4.77□□□□□ -1.65
HMGB3P3-201ENST00000510526 ESCO1Q5FWF5 840 aa4.77□□□□□ -1.65
HMGB3P3-201ENST00000510526 TMEM214Q6NUQ4 689 aaKnown RBP4.77□□□□□ -1.65
HMGB3P3-201ENST00000510526 GPBP1L1Q9HC44 474 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P3-201ENST00000510526 PHKA2P46019 1235 aa4.76□□□□□ -1.65
HMGB3P3-201ENST00000510526 FIGNL1Q6PIW4 674 aa4.76□□□□□ -1.65
HMGB3P3-201ENST00000510526 LINC00114Q6XXX2 140 aa4.76□□□□□ -1.65
HMGB3P3-201ENST00000510526 C1orf229Q6ZS94 237 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P3-201ENST00000510526 PCMTD1Q96MG8 357 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P3-201ENST00000510526 RAB6BQ9NRW1 208 aa4.76□□□□□ -1.65
HMGB3P3-201ENST00000510526 C1QTNF9BB2RNN3 333 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 IL2RAP01589 272 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 THBS1P07996 1170 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 ARAFP10398 606 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 FGFR3P22607 806 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 XAGE2Q96GT9 111 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 GJD4Q96KN9 370 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 PSMG3-AS1Q96PY0 264 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 GGA1Q9UJY5 639 aa4.75□□□□□ -1.65
HMGB3P3-201ENST00000510526 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 APBB1O00213 710 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 SOCS7O14512 581 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 EPXP11678 715 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 MSX1P28360 303 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 UBAP2LQ14157 1087 aaKnown RBP4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 C1orf216Q8TAB5 229 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 RHBDD1Q8TEB9 315 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 BTBD6Q96KE9 485 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 CRISPLD1Q9H336 500 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 RUBCNLQ9H714 662 aa4.74□□□□□ -1.65
HMGB3P3-201ENST00000510526 C2CD2LO14523 706 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 BNIP3LO60238 219 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 HOXB4P17483 251 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 DGKGP49619 791 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 C4orf17Q53FE4 359 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 CD163Q86VB7 1156 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 RNF135Q8IUD6 432 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 KRTAP1-3Q8IUG1 177 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 ABHD17AQ96GS6 310 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 FHDC1Q9C0D6 1143 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 SUV39H2Q9H5I1 410 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 AVENQ9NQS1 362 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 PCDHGC4Q9Y5F7 938 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 HRH3Q9Y5N1 445 aa4.73□□□□□ -1.65
HMGB3P3-201ENST00000510526 CTBSQ01459 385 aa4.72□□□□□ -1.65
HMGB3P3-201ENST00000510526 USP4Q13107 963 aa4.72□□□□□ -1.65
HMGB3P3-201ENST00000510526 TBC1D9Q6ZT07 1266 aa4.72□□□□□ -1.65
HMGB3P3-201ENST00000510526 NLRP8Q86W28 1048 aa4.72□□□□□ -1.65
HMGB3P3-201ENST00000510526 PPARGC1BQ86YN6 1023 aaKnown RBP4.72□□□□□ -1.65
HMGB3P3-201ENST00000510526 SIRT1Q96EB6 747 aa4.72□□□□□ -1.65
HMGB3P3-201ENST00000510526 NEURL1BA8MQ27 555 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 ADH6P28332 368 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 FAM182BQ5T319 152 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 CHSY3Q70JA7 882 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 BANK1Q8NDB2 785 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 SEMA6BQ9H3T3 888 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 CEP126Q9P2H0 1117 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 NDUFB9Q9Y6M9 179 aa4.71□□□□□ -1.66
HMGB3P3-201ENST00000510526 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
HMGB3P3-201ENST00000510526 SPDYE3A6NKU9 549 aa4.7□□□□□ -1.66
HMGB3P3-201ENST00000510526 SPATA31C1P0DKV0 1188 aa4.7□□□□□ -1.66
HMGB3P3-201ENST00000510526 CHRNA4P43681 627 aa4.7□□□□□ -1.66
HMGB3P3-201ENST00000510526 GATA4P43694 442 aa4.7□□□□□ -1.66
HMGB3P3-201ENST00000510526 TLR1Q15399 786 aa4.7□□□□□ -1.66
HMGB3P3-201ENST00000510526 ZCCHC2Q9C0B9 1178 aaKnown RBP4.7□□□□□ -1.66
HMGB3P3-201ENST00000510526 ATXN7O15265 892 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P3-201ENST00000510526 DOC2BQ14184 412 aa4.69□□□□□ -1.66
HMGB3P3-201ENST00000510526 ZMYM1Q5SVZ6 1142 aa4.69□□□□□ -1.66
HMGB3P3-201ENST00000510526 CCDC85AQ96PX6 553 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P3-201ENST00000510526 CDCA7Q9BWT1 371 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P3-201ENST00000510526 PLA2G4AP47712 749 aa4.68□□□□□ -1.66
HMGB3P3-201ENST00000510526 NIFKQ9BYG3 293 aaKnown RBP4.68□□□□□ -1.66
HMGB3P3-201ENST00000510526 ETNK1Q9HBU6 452 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms