RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PTPRCP08575 1304 aa15.37■□□□□ 0.05
LIN54-206ENST00000506560 C1orf141Q5JVX7 400 aa15.37■□□□□ 0.05
LIN54-206ENST00000506560 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
LIN54-206ENST00000506560 NOP58Q9Y2X3 529 aaKnown RBP15.37■□□□□ 0.05
LIN54-206ENST00000506560 BTBD11A6QL63 1104 aa15.36■□□□□ 0.05
LIN54-206ENST00000506560 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
LIN54-206ENST00000506560 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
LIN54-206ENST00000506560 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
LIN54-206ENST00000506560 NUCB1Q02818 461 aa15.36■□□□□ 0.05
LIN54-206ENST00000506560 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
LIN54-206ENST00000506560 SLC4A3P48751 1232 aa15.36■□□□□ 0.05
LIN54-206ENST00000506560 ANKRD45Q5TZF3 282 aa15.36■□□□□ 0.05
LIN54-206ENST00000506560 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
LIN54-206ENST00000506560 ATP10DQ9P241 1426 aa15.35■□□□□ 0.05
LIN54-206ENST00000506560 SLC39A6Q13433 755 aa15.34■□□□□ 0.05
LIN54-206ENST00000506560 CHD1LQ86WJ1 897 aa15.34■□□□□ 0.05
LIN54-206ENST00000506560 RAPGEF4Q8WZA2 1011 aa15.34■□□□□ 0.05
LIN54-206ENST00000506560 KDM3BQ7LBC6 1761 aa15.34■□□□□ 0.05
LIN54-206ENST00000506560 SOS2Q07890 1332 aaPredicted RBP15.34■□□□□ 0.05
LIN54-206ENST00000506560 ERICH6Q7L0X2 663 aa15.34■□□□□ 0.05
LIN54-206ENST00000506560 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
LIN54-206ENST00000506560 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
LIN54-206ENST00000506560 APBB1O00213 710 aa15.32■□□□□ 0.04
LIN54-206ENST00000506560 PRDM11Q9NQV5 511 aa15.32■□□□□ 0.04
LIN54-206ENST00000506560 ZBTB47Q9UFB7 747 aaPredicted RBP15.32■□□□□ 0.04
LIN54-206ENST00000506560 KDM6AO15550 1401 aaPredicted RBP15.32■□□□□ 0.04
LIN54-206ENST00000506560 PROSER3Q2NL68 480 aa15.32■□□□□ 0.04
LIN54-206ENST00000506560 BABAM1Q9NWV8 329 aa15.32■□□□□ 0.04
LIN54-206ENST00000506560 CYP27B1O15528 508 aa15.31■□□□□ 0.04
LIN54-206ENST00000506560 TATP17735 454 aaPredicted RBP15.3■□□□□ 0.04
LIN54-206ENST00000506560 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
LIN54-206ENST00000506560 ANKRD44Q8N8A2 993 aa15.3■□□□□ 0.04
LIN54-206ENST00000506560 PHKG2P15735 406 aa15.3■□□□□ 0.04
LIN54-206ENST00000506560 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
LIN54-206ENST00000506560 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
LIN54-206ENST00000506560 NFATC2IPQ8NCF5 419 aa15.3■□□□□ 0.04
LIN54-206ENST00000506560 OTUD7AQ8TE49 926 aaPredicted RBP15.3■□□□□ 0.04
LIN54-206ENST00000506560 CPDO75976 1380 aa15.3■□□□□ 0.04
LIN54-206ENST00000506560 GCC1Q96CN9 775 aa15.29■□□□□ 0.04
LIN54-206ENST00000506560 GIGYF1O75420 1035 aaPredicted RBP15.29■□□□□ 0.04
LIN54-206ENST00000506560 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
LIN54-206ENST00000506560 DCTPP1Q9H773 170 aa15.28■□□□□ 0.04
LIN54-206ENST00000506560 CACNA1FO60840 1977 aa15.28■□□□□ 0.04
LIN54-206ENST00000506560 SIPA1L3O60292 1781 aaPredicted RBP15.28■□□□□ 0.04
LIN54-206ENST00000506560 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
LIN54-206ENST00000506560 PI4KAP2A4QPH2 592 aa15.27■□□□□ 0.03
LIN54-206ENST00000506560 TOM1L2Q6ZVM7 507 aa15.27■□□□□ 0.03
LIN54-206ENST00000506560 PI4KAP1Q8N8J0 262 aa15.27■□□□□ 0.03
LIN54-206ENST00000506560 USP44Q9H0E7 712 aa15.26■□□□□ 0.03
LIN54-206ENST00000506560 PNMA6EA0A0J9YXQ4 647 aa15.26■□□□□ 0.03
LIN54-206ENST00000506560 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
LIN54-206ENST00000506560 SLC52A2Q9HAB3 445 aa15.26■□□□□ 0.03
LIN54-206ENST00000506560 ADAMTS7Q9UKP4 1686 aa15.26■□□□□ 0.03
LIN54-206ENST00000506560 SCN11AQ9UI33 1791 aa15.25■□□□□ 0.03
LIN54-206ENST00000506560 LARP1Q6PKG0 1096 aaKnown RBP15.25■□□□□ 0.03
LIN54-206ENST00000506560 RPAP2Q8IXW5 612 aaPredicted RBP15.25■□□□□ 0.03
LIN54-206ENST00000506560 USP35Q9P2H5 1018 aa15.25■□□□□ 0.03
LIN54-206ENST00000506560 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
LIN54-206ENST00000506560 LRRFIP2Q9Y608 721 aaKnown RBP15.25■□□□□ 0.03
LIN54-206ENST00000506560 HEG1Q9ULI3 1381 aa15.25■□□□□ 0.03
LIN54-206ENST00000506560 IFNL2Q8IZJ0 200 aa15.25■□□□□ 0.03
LIN54-206ENST00000506560 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
LIN54-206ENST00000506560 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
LIN54-206ENST00000506560 ABCA3Q99758 1704 aa15.24■□□□□ 0.03
LIN54-206ENST00000506560 WDR17Q8IZU2 1322 aa15.24■□□□□ 0.03
LIN54-206ENST00000506560 ADCY9O60503 1353 aa15.24■□□□□ 0.03
LIN54-206ENST00000506560 COL5A2P05997 1499 aaPredicted RBP15.24■□□□□ 0.03
LIN54-206ENST00000506560 ZNF496Q96IT1 587 aaPredicted RBP15.24■□□□□ 0.03
LIN54-206ENST00000506560 EXOC6BQ9Y2D4 811 aa15.24■□□□□ 0.03
LIN54-206ENST00000506560 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
LIN54-206ENST00000506560 OVOS2A0A0G2JMS6 1433 aa15.23■□□□□ 0.03
LIN54-206ENST00000506560 GNAI2P04899 355 aa15.23■□□□□ 0.03
LIN54-206ENST00000506560 HOXB7P09629 217 aa15.23■□□□□ 0.03
LIN54-206ENST00000506560 NBPF7P0C2Y1 421 aaPredicted RBP15.23■□□□□ 0.03
LIN54-206ENST00000506560 PLEKHM2Q8IWE5 1019 aa15.23■□□□□ 0.03
LIN54-206ENST00000506560 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
LIN54-206ENST00000506560 AIMP1Q12904 312 aaKnown RBP15.22■□□□□ 0.03
LIN54-206ENST00000506560 C5P01031 1676 aa15.22■□□□□ 0.03
LIN54-206ENST00000506560 PDIA6Q15084 440 aa15.22■□□□□ 0.03
LIN54-206ENST00000506560 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
LIN54-206ENST00000506560 NHSL1Q5SYE7 1610 aa15.22■□□□□ 0.03
LIN54-206ENST00000506560 NBR1Q14596 966 aa15.21■□□□□ 0.03
LIN54-206ENST00000506560 BEND3Q5T5X7 828 aa15.21■□□□□ 0.03
LIN54-206ENST00000506560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.21■□□□□ 0.035e-8■□□□□ 10.8
LIN54-206ENST00000506560 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.03
LIN54-206ENST00000506560 USP16Q9Y5T5 823 aa15.21■□□□□ 0.03
LIN54-206ENST00000506560 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
LIN54-206ENST00000506560 TBC1D32Q96NH3 1257 aa15.21■□□□□ 0.03
LIN54-206ENST00000506560 PKD1L3Q7Z443 1732 aa15.21■□□□□ 0.02
LIN54-206ENST00000506560 MYL6BP14649 208 aa15.2■□□□□ 0.02
LIN54-206ENST00000506560 DCAF5Q96JK2 942 aa15.2■□□□□ 0.02
LIN54-206ENST00000506560 SRCIN1Q9C0H9 1055 aa15.2■□□□□ 0.02
LIN54-206ENST00000506560 MAP3K2Q9Y2U5 619 aa15.2■□□□□ 0.02
LIN54-206ENST00000506560 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
LIN54-206ENST00000506560 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
LIN54-206ENST00000506560 ABCC6O95255 1503 aa15.2■□□□□ 0.02
LIN54-206ENST00000506560 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
LIN54-206ENST00000506560 GNAI3P08754 354 aa15.19■□□□□ 0.02
LIN54-206ENST00000506560 UBTFL1P0CB47 393 aaPredicted RBP15.19■□□□□ 0.02
LIN54-206ENST00000506560 DDRGK1Q96HY6 314 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms