RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 PLEKHO1Q53GL0 409 aaPredicted RBP27.9■■■□□ 2.06
TRIO-207ENST00000505971 DCAF5Q96JK2 942 aa27.9■■■□□ 2.06
TRIO-207ENST00000505971 KDRP35968 1356 aa27.89■■■□□ 2.06
TRIO-207ENST00000505971 HSP90AB1P08238 724 aaKnown RBP27.89■■■□□ 2.06
TRIO-207ENST00000505971 AMOTQ4VCS5 1084 aa27.89■■■□□ 2.06
TRIO-207ENST00000505971 GRIN3BO60391 1043 aa27.88■■■□□ 2.05
TRIO-207ENST00000505971 AMER1Q5JTC6 1135 aaPredicted RBP27.88■■■□□ 2.05
TRIO-207ENST00000505971 SLC4A9Q96Q91 983 aa27.88■■■□□ 2.05
TRIO-207ENST00000505971 KNSTRNQ9Y448 316 aa27.88■■■□□ 2.05
TRIO-207ENST00000505971 PELP1Q8IZL8 1130 aaKnown RBP27.87■■■□□ 2.05
TRIO-207ENST00000505971 KDM6AO15550 1401 aaPredicted RBP27.86■■■□□ 2.05
TRIO-207ENST00000505971 PHF14O94880 888 aa27.86■■■□□ 2.05
TRIO-207ENST00000505971 AEBP1Q8IUX7 1158 aa27.86■■■□□ 2.05
TRIO-207ENST00000505971 IL13P35225 146 aa27.85■■■□□ 2.05
TRIO-207ENST00000505971 GNPATO15228 680 aa27.83■■■□□ 2.05
TRIO-207ENST00000505971 ZNF530Q6P9A1 599 aaPredicted RBP27.83■■■□□ 2.05
TRIO-207ENST00000505971 KIF7Q2M1P5 1343 aa27.83■■■□□ 2.05
TRIO-207ENST00000505971 PER1O15534 1290 aaPredicted RBP27.81■■■□□ 2.04
TRIO-207ENST00000505971 RC3H1Q5TC82 1133 aaKnown RBP27.81■■■□□ 2.04
TRIO-207ENST00000505971 SULT6B1Q6IMI4 303 aa27.81■■■□□ 2.04
TRIO-207ENST00000505971 COL5A3P25940 1745 aaPredicted RBP27.81■■■□□ 2.04
TRIO-207ENST00000505971 MYH14Q7Z406 1995 aaKnown RBP27.79■■■□□ 2.04
TRIO-207ENST00000505971 MTHFSP49914 203 aa27.79■■■□□ 2.04
TRIO-207ENST00000505971 CABP4P57796 275 aa27.78■■■□□ 2.04
TRIO-207ENST00000505971 CNTNAP4Q9C0A0 1308 aa27.77■■■□□ 2.04
TRIO-207ENST00000505971 RBM42Q9BTD8 480 aaKnown RBP27.77■■■□□ 2.04
TRIO-207ENST00000505971 TRAPPC3LQ5T215 181 aa27.76■■■□□ 2.03
TRIO-207ENST00000505971 RTCBQ9Y3I0 505 aaKnown RBP27.76■■■□□ 2.03
TRIO-207ENST00000505971 ADRA2BP18089 450 aa27.75■■■□□ 2.03
TRIO-207ENST00000505971 C1QTNF8P60827 252 aa27.75■■■□□ 2.03
TRIO-207ENST00000505971 C1orf141Q5JVX7 400 aa27.75■■■□□ 2.03
TRIO-207ENST00000505971 NFATC2IPQ8NCF5 419 aa27.75■■■□□ 2.03
TRIO-207ENST00000505971 SCN11AQ9UI33 1791 aa27.75■■■□□ 2.03
TRIO-207ENST00000505971 RPS6KA4O75676 772 aa27.74■■■□□ 2.03
TRIO-207ENST00000505971 KIF13BQ9NQT8 1826 aa27.74■■■□□ 2.03
TRIO-207ENST00000505971 ARHGEF1Q92888 912 aaKnown RBP27.73■■■□□ 2.03
TRIO-207ENST00000505971 MMP10P09238 476 aa27.72■■■□□ 2.03
TRIO-207ENST00000505971 NLGN1Q8N2Q7 840 aa27.72■■■□□ 2.03
TRIO-207ENST00000505971 CICQ96RK0 1608 aaPredicted RBP27.71■■■□□ 2.03
TRIO-207ENST00000505971 AKAP4Q5JQC9 854 aa27.7■■■□□ 2.02
TRIO-207ENST00000505971 KIAA1551Q9HCM1 1747 aa27.68■■■□□ 2.02
TRIO-207ENST00000505971 PTCD1O75127 700 aaKnown RBP27.68■■■□□ 2.02
TRIO-207ENST00000505971 GYS1P13807 737 aa27.68■■■□□ 2.02
TRIO-207ENST00000505971 C4AP0C0L4 1744 aa27.67■■■□□ 2.02
TRIO-207ENST00000505971 TJP1Q07157 1748 aa27.67■■■□□ 2.02
TRIO-207ENST00000505971 ADCY9O60503 1353 aa27.66■■■□□ 2.02
TRIO-207ENST00000505971 NPC1L1Q9UHC9 1359 aa27.66■■■□□ 2.02
TRIO-207ENST00000505971 GIGYF1O75420 1035 aaPredicted RBP27.65■■■□□ 2.02
TRIO-207ENST00000505971 LGR6Q9HBX8 967 aa27.65■■■□□ 2.02
TRIO-207ENST00000505971 VIRMAQ69YN4 1812 aaKnown RBP27.64■■■□□ 2.02
TRIO-207ENST00000505971 RFC4P35249 363 aa27.64■■■□□ 2.02
TRIO-207ENST00000505971 CRKLP46109 303 aaKnown RBP27.64■■■□□ 2.02
TRIO-207ENST00000505971 TGFB2P61812 414 aa27.64■■■□□ 2.02
TRIO-207ENST00000505971 SLC52A2Q9HAB3 445 aa27.64■■■□□ 2.02
TRIO-207ENST00000505971 ADAMTS7Q9UKP4 1686 aa27.64■■■□□ 2.02
TRIO-207ENST00000505971 PXDNLA1KZ92 1463 aa27.64■■■□□ 2.01
TRIO-207ENST00000505971 MRC1P22897 1456 aa27.64■■■□□ 2.01
TRIO-207ENST00000505971 HMOX1P09601 288 aa27.63■■■□□ 2.01
TRIO-207ENST00000505971 C10orf71Q711Q0 1435 aa27.63■■■□□ 2.01
TRIO-207ENST00000505971 ATP10DQ9P241 1426 aa27.63■■■□□ 2.01
TRIO-207ENST00000505971 DIAPH1O60610 1272 aaKnown RBP27.62■■■□□ 2.01
TRIO-207ENST00000505971 CC2D1BQ5T0F9 858 aaKnown RBP27.62■■■□□ 2.01
TRIO-207ENST00000505971 RNMTO43148 476 aaKnown RBP27.61■■■□□ 2.01
TRIO-207ENST00000505971 INTS5Q6P9B9 1019 aaKnown RBP27.61■■■□□ 2.01
TRIO-207ENST00000505971 N4BP2Q86UW6 1770 aaPredicted RBP27.6■■■□□ 2.01
TRIO-207ENST00000505971 MTHFSDQ2M296 383 aaKnown RBP27.6■■■□□ 2.01
TRIO-207ENST00000505971 WWC3Q9ULE0 1092 aa27.6■■■□□ 2.01
TRIO-207ENST00000505971 COL3A1P02461 1466 aaPredicted RBP27.59■■■□□ 2.01
TRIO-207ENST00000505971 USP42Q9H9J4 1324 aaKnown RBP27.58■■■□□ 2.01
TRIO-207ENST00000505971 BRCA1P38398 1863 aaKnown RBP27.57■■■□□ 2
TRIO-207ENST00000505971 SENP3-EIF4A1A0A087X0R7 540 aa27.57■■■□□ 2
TRIO-207ENST00000505971 CCDC87Q9NVE4 849 aa27.57■■■□□ 2
TRIO-207ENST00000505971 A0A0G2JLW4 131 aa27.56■■■□□ 2
TRIO-207ENST00000505971 DNAJC10Q8IXB1 793 aa27.56■■■□□ 2
TRIO-207ENST00000505971 PARP3Q9Y6F1 533 aa27.56■■■□□ 2
TRIO-207ENST00000505971 SRP68Q9UHB9 627 aaKnown RBP27.55■■■□□ 2
TRIO-207ENST00000505971 KCPQ6ZWJ8 1503 aa27.55■■■□□ 2
TRIO-207ENST00000505971 SLC39A6Q13433 755 aa27.54■■■□□ 2
TRIO-207ENST00000505971 FKBP8Q14318 412 aa27.54■■■□□ 2
TRIO-207ENST00000505971 CYP19A1P11511 503 aaPredicted RBP27.53■■■□□ 2
TRIO-207ENST00000505971 DPEP1P16444 411 aa27.53■■■□□ 2
TRIO-207ENST00000505971 KCNA3P22001 575 aa27.53■■■□□ 2
TRIO-207ENST00000505971 CEP350Q5VT06 3117 aa27.53■■■□□ 2
TRIO-207ENST00000505971 TM4SF1P30408 202 aa27.52■■■□□ 2
TRIO-207ENST00000505971 DDR1Q08345 913 aa27.52■■■□□ 2
TRIO-207ENST00000505971 VSIG10Q8N0Z9 540 aa27.52■■■□□ 2
TRIO-207ENST00000505971 GPBP1L1Q9HC44 474 aaPredicted RBP27.52■■■□□ 2
TRIO-207ENST00000505971 UBR2Q8IWV8 1755 aa27.51■■□□□ 1.99
TRIO-207ENST00000505971 SOS1Q07889 1333 aaPredicted RBP27.51■■□□□ 1.99
TRIO-207ENST00000505971 BCS1LQ9Y276 419 aa27.49■■□□□ 1.99
TRIO-207ENST00000505971 ARFGEF1Q9Y6D6 1849 aa27.48■■□□□ 1.99
TRIO-207ENST00000505971 POLRMTO00411 1230 aaKnown RBP27.47■■□□□ 1.99
TRIO-207ENST00000505971 IL17REQ8NFR9 667 aa27.47■■□□□ 1.99
TRIO-207ENST00000505971 NARFQ9UHQ1 456 aa27.46■■□□□ 1.99
TRIO-207ENST00000505971 USPL1Q5W0Q7 1092 aa27.45■■□□□ 1.98
TRIO-207ENST00000505971 ZBTB1Q9Y2K1 713 aa27.45■■□□□ 1.98
TRIO-207ENST00000505971 U2SURPO15042 1029 aaKnown RBP27.44■■□□□ 1.98
TRIO-207ENST00000505971 ZPR1O75312 459 aa27.44■■□□□ 1.98
TRIO-207ENST00000505971 GAS2L2Q8NHY3 880 aa27.44■■□□□ 1.98
TRIO-207ENST00000505971 SIPA1L3O60292 1781 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms