RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 FAM196BA6NMK8 535 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 TMEM229AB2RXF0 380 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 STAU1O95793 577 aaKnown RBP6.12□□□□□ -1.43
ATXN3-208ENST00000504047 SMTNP53814 917 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 PTSQ03393 145 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 KANK4Q5T7N3 995 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-208ENST00000504047 TAS1R3Q7RTX0 852 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 SIX5Q8N196 739 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 CCDC82Q8N4S0 544 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 NBPF15Q8N660 670 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATXN3-208ENST00000504047 SLC16A10Q8TF71 515 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-208ENST00000504047 HRH3Q9Y5N1 445 aa6.12□□□□□ -1.43
ATXN3-208ENST00000504047 SPATA31C2B4DYI2 1134 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L15C9J2P7 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L10C9JJH3 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L13C9JLJ4 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L12C9JPN9 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L11C9JVI0 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L21D6R901 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L18D6R9N7 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L22D6RA61 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L17D6RBQ6 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L19D6RCP7 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L20D6RJB6 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 ZBTB7BO15156 539 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-208ENST00000504047 SEC13P55735 322 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 USP17L24Q0WX57 530 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 WDR44Q5JSH3 913 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 NBPF10Q6P3W6 841 aaKnown RBP6.11□□□□□ -1.43
ATXN3-208ENST00000504047 RHBDD1Q8TEB9 315 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 SLC4A9Q96Q91 983 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 FHDC1Q9C0D6 1143 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-208ENST00000504047 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 KIAA1024Q9UPX6 916 aa6.11□□□□□ -1.43
ATXN3-208ENST00000504047 A6NJY4 79 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 M0R2N6 131 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 TERTO14746 1132 aaKnown RBP6.1□□□□□ -1.43
ATXN3-208ENST00000504047 RHOQP17081 205 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 POU4F2Q12837 409 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 PTK7Q13308 1070 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 MTFR1Q15390 333 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 PPARGC1BQ86YN6 1023 aaKnown RBP6.1□□□□□ -1.43
ATXN3-208ENST00000504047 CCDC155Q8N6L0 562 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 ZNF775Q96BV0 537 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-208ENST00000504047 TIMMDC1Q9NPL8 285 aa6.1□□□□□ -1.43
ATXN3-208ENST00000504047 SLC35F4A4IF30 521 aa6.09□□□□□ -1.43
ATXN3-208ENST00000504047 SUPT5HO00267 1087 aaKnown RBP6.09□□□□□ -1.43
ATXN3-208ENST00000504047 CDK2AP1O14519 115 aa6.09□□□□□ -1.43
ATXN3-208ENST00000504047 CRTC2Q53ET0 693 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-208ENST00000504047 CDCA8Q53HL2 280 aa6.09□□□□□ -1.43
ATXN3-208ENST00000504047 PBXIP1Q96AQ6 731 aa6.09□□□□□ -1.43
ATXN3-208ENST00000504047 NIFKQ9BYG3 293 aaKnown RBP6.09□□□□□ -1.43
ATXN3-208ENST00000504047 CHMP3Q9Y3E7 222 aa6.09□□□□□ -1.43
ATXN3-208ENST00000504047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-208ENST00000504047 PPFIA3O75145 1194 aa6.08□□□□□ -1.44
ATXN3-208ENST00000504047 PHKA2P46019 1235 aa6.08□□□□□ -1.44
ATXN3-208ENST00000504047 DPYDQ12882 1025 aa6.08□□□□□ -1.44
ATXN3-208ENST00000504047 ANKMY2Q8IV38 441 aa6.08□□□□□ -1.44
ATXN3-208ENST00000504047 FAM200AQ8TCP9 573 aa6.08□□□□□ -1.44
ATXN3-208ENST00000504047 C1orf115Q9H7X2 142 aa6.08□□□□□ -1.44
ATXN3-208ENST00000504047 DYRK1BQ9Y463 629 aa6.08□□□□□ -1.44
ATXN3-208ENST00000504047 A0A1B0GTH6 734 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 SFI1A8K8P3 1242 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 H3BM21 787 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 H7C1W4 665 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 C4orf17Q53FE4 359 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 IRF7Q92985 503 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 GAS2L1Q99501 681 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-208ENST00000504047 HINFPQ9BQA5 517 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 CABP1Q9NZU7 370 aa6.07□□□□□ -1.44
ATXN3-208ENST00000504047 SCHIP1Q9P0W5 487 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-208ENST00000504047 NOVA2Q9UNW9 492 aaKnown RBP6.07□□□□□ -1.44
ATXN3-208ENST00000504047 SENP3-EIF4A1A0A087X0R7 540 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 PPP1R15AO75807 674 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-208ENST00000504047 WFS1O76024 890 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 DKK1O94907 266 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 CSB-PGBD3P0DP91 1061 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 ITGA6P23229 1130 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 PLA2G4AP47712 749 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 VEGFBP49765 207 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 ELOAQ14241 798 aaKnown RBP6.06□□□□□ -1.44
ATXN3-208ENST00000504047 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 RIPOR1Q6ZS17 1223 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 TNS4Q8IZW8 715 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 PGBD3Q8N328 593 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 GMCL1Q96IK5 515 aa6.06□□□□□ -1.44
ATXN3-208ENST00000504047 ACIN1Q9UKV3 1341 aaKnown RBP6.05□□□□□ -1.44
ATXN3-208ENST00000504047 ATG7O95352 703 aa6.05□□□□□ -1.44
ATXN3-208ENST00000504047 F11P03951 625 aa6.05□□□□□ -1.44
ATXN3-208ENST00000504047 FOXK2Q01167 660 aa6.05□□□□□ -1.44
ATXN3-208ENST00000504047 NFX1Q12986 1120 aaKnown RBP6.05□□□□□ -1.44
ATXN3-208ENST00000504047 SLC9A9Q8IVB4 645 aa6.05□□□□□ -1.44
ATXN3-208ENST00000504047 TSEN2Q8NCE0 465 aaKnown RBP6.05□□□□□ -1.44
ATXN3-208ENST00000504047 C1orf216Q8TAB5 229 aa6.05□□□□□ -1.44
ATXN3-208ENST00000504047 AIDAQ96BJ3 306 aa6.05□□□□□ -1.44
ATXN3-208ENST00000504047 IQSEC3Q9UPP2 1182 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-208ENST00000504047 CDC14CA4D256 554 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 TATP17735 454 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms