RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 PHKA2P46019 1235 aa8.86□□□□□ -0.99
UBE2B-203ENST00000503080 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
UBE2B-203ENST00000503080 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
UBE2B-203ENST00000503080 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
UBE2B-203ENST00000503080 SERTAD1Q9UHV2 236 aa8.86□□□□□ -0.99
UBE2B-203ENST00000503080 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 TMEM229AB2RXF0 380 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 PSME1Q06323 249 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 GNASQ5JWF2 1037 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 RIPOR1Q6ZS17 1223 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 PLEKHM2Q8IWE5 1019 aa8.85□□□□□ -0.99
UBE2B-203ENST00000503080 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
UBE2B-203ENST00000503080 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
UBE2B-203ENST00000503080 TFIP11Q9UBB9 837 aaKnown RBP8.84□□□□□ -0.99
UBE2B-203ENST00000503080 SMTNP53814 917 aa8.83□□□□□ -1
UBE2B-203ENST00000503080 RHBDD1Q8TEB9 315 aa8.83□□□□□ -1
UBE2B-203ENST00000503080 ZNF777Q9ULD5 760 aaPredicted RBP8.83□□□□□ -1
UBE2B-203ENST00000503080 F11P03951 625 aa8.82□□□□□ -1
UBE2B-203ENST00000503080 KRT76Q01546 638 aa8.82□□□□□ -1
UBE2B-203ENST00000503080 DBN1Q16643 649 aa8.82□□□□□ -1
UBE2B-203ENST00000503080 TRIM50Q86XT4 487 aa8.82□□□□□ -1
UBE2B-203ENST00000503080 TRIM22Q8IYM9 498 aa8.82□□□□□ -1
UBE2B-203ENST00000503080 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.82□□□□□ -1
UBE2B-203ENST00000503080 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
UBE2B-203ENST00000503080 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
UBE2B-203ENST00000503080 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
UBE2B-203ENST00000503080 PALM3A6NDB9 673 aaPredicted RBP8.81□□□□□ -1
UBE2B-203ENST00000503080 A6NJY4 79 aa8.81□□□□□ -1
UBE2B-203ENST00000503080 ZNF837Q96EG3 531 aaPredicted RBP8.81□□□□□ -1
UBE2B-203ENST00000503080 GMCL1Q96IK5 515 aa8.81□□□□□ -1
UBE2B-203ENST00000503080 CNTNAP3BQ96NU0 1288 aa8.81□□□□□ -1
UBE2B-203ENST00000503080 CNTNAP3Q9BZ76 1288 aa8.81□□□□□ -1
UBE2B-203ENST00000503080 GTF3C3Q9Y5Q9 886 aa8.81□□□□□ -1
UBE2B-203ENST00000503080 A0A1B0GTH6 734 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 H7C1W4 665 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 BACH1O14867 736 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 ZBTB7BO15156 539 aaPredicted RBP8.8□□□□□ -1
UBE2B-203ENST00000503080 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
UBE2B-203ENST00000503080 ATP1A2P50993 1020 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 CLDN10P78369 228 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 RNFT1Q5M7Z0 435 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 ZSCAN1Q8NBB4 408 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 GPAMQ9HCL2 828 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 ZNF358Q9NW07 568 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 KIAA1024Q9UPX6 916 aa8.8□□□□□ -1
UBE2B-203ENST00000503080 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
UBE2B-203ENST00000503080 MTFR1Q15390 333 aa8.79□□□□□ -1
UBE2B-203ENST00000503080 OGFOD1Q8N543 542 aa8.79□□□□□ -1
UBE2B-203ENST00000503080 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
UBE2B-203ENST00000503080 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
UBE2B-203ENST00000503080 CDK2AP1O14519 115 aa8.78□□□□□ -1
UBE2B-203ENST00000503080 PLA2G4AP47712 749 aa8.78□□□□□ -1
UBE2B-203ENST00000503080 CCDC102BQ68D86 513 aa8.78□□□□□ -1
UBE2B-203ENST00000503080 FOXR1Q6PIV2 292 aa8.78□□□□□ -1
UBE2B-203ENST00000503080 GTPBP3Q969Y2 492 aaKnown RBP8.78□□□□□ -1
UBE2B-203ENST00000503080 NIFKQ9BYG3 293 aaKnown RBP8.78□□□□□ -1
UBE2B-203ENST00000503080 IQSEC3Q9UPP2 1182 aaPredicted RBP8.78□□□□□ -1
UBE2B-203ENST00000503080 GPR25O00155 361 aa8.77□□□□□ -1.01
UBE2B-203ENST00000503080 MSX1P28360 303 aa8.77□□□□□ -1.01
UBE2B-203ENST00000503080 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
UBE2B-203ENST00000503080 NUCKS1Q9H1E3 243 aaKnown RBP8.77□□□□□ -1.01
UBE2B-203ENST00000503080 STK17AQ9UEE5 414 aa8.77□□□□□ -1.01
UBE2B-203ENST00000503080 USP3Q9Y6I4 520 aa8.77□□□□□ -1.01
UBE2B-203ENST00000503080 AIDAQ96BJ3 306 aa8.76□□□□□ -1.01
UBE2B-203ENST00000503080 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
UBE2B-203ENST00000503080 RUBCNLQ9H714 662 aa8.76□□□□□ -1.01
UBE2B-203ENST00000503080 CABP1Q9NZU7 370 aa8.76□□□□□ -1.01
UBE2B-203ENST00000503080 CSB-PGBD3P0DP91 1061 aa8.75□□□□□ -1.01
UBE2B-203ENST00000503080 RASA1P20936 1047 aa8.75□□□□□ -1.01
UBE2B-203ENST00000503080 LMOD1P29536 600 aaPredicted RBP8.75□□□□□ -1.01
UBE2B-203ENST00000503080 GAS6Q14393 721 aa8.75□□□□□ -1.01
UBE2B-203ENST00000503080 TNS4Q8IZW8 715 aa8.75□□□□□ -1.01
UBE2B-203ENST00000503080 ZNF295-AS1Q8N0V1 137 aa8.75□□□□□ -1.01
UBE2B-203ENST00000503080 PGBD3Q8N328 593 aa8.75□□□□□ -1.01
UBE2B-203ENST00000503080 ZNF594Q96JF6 807 aaPredicted RBP8.75□□□□□ -1.01
UBE2B-203ENST00000503080 THBS1P07996 1170 aa8.74□□□□□ -1.01
UBE2B-203ENST00000503080 EPHA4P54764 986 aa8.74□□□□□ -1.01
UBE2B-203ENST00000503080 TRERF1Q96PN7 1200 aa8.74□□□□□ -1.01
UBE2B-203ENST00000503080 SCHIP1Q9P0W5 487 aaPredicted RBP8.74□□□□□ -1.01
UBE2B-203ENST00000503080 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
UBE2B-203ENST00000503080 SIX5Q8N196 739 aa8.73□□□□□ -1.01
UBE2B-203ENST00000503080 RBM19Q9Y4C8 960 aaKnown RBP8.73□□□□□ -1.01
UBE2B-203ENST00000503080 PARP3Q9Y6F1 533 aa8.73□□□□□ -1.01
UBE2B-203ENST00000503080 FAM181BA6NEQ2 426 aa8.72□□□□□ -1.01
UBE2B-203ENST00000503080 SFI1A8K8P3 1242 aa8.72□□□□□ -1.01
UBE2B-203ENST00000503080 DKK1O94907 266 aa8.72□□□□□ -1.01
UBE2B-203ENST00000503080 FOXK2Q01167 660 aa8.72□□□□□ -1.01
UBE2B-203ENST00000503080 EFHC2Q5JST6 749 aa8.72□□□□□ -1.01
UBE2B-203ENST00000503080 TBCELQ5QJ74 424 aa8.72□□□□□ -1.01
UBE2B-203ENST00000503080 LARP1Q6PKG0 1096 aaKnown RBP8.72□□□□□ -1.01
UBE2B-203ENST00000503080 SLC9A9Q8IVB4 645 aa8.72□□□□□ -1.01
UBE2B-203ENST00000503080 ATP4AP20648 1035 aa8.71□□□□□ -1.02
UBE2B-203ENST00000503080 LBRQ14739 615 aaKnown RBP8.71□□□□□ -1.02
UBE2B-203ENST00000503080 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
UBE2B-203ENST00000503080 CRTC2Q53ET0 693 aaPredicted RBP8.71□□□□□ -1.02
UBE2B-203ENST00000503080 CFAP70Q5T0N1 1121 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms