RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZNF775Q96BV0 537 aaPredicted RBP8.84□□□□□ -0.99
VPS36-206ENST00000497149 XAGE2Q96GT9 111 aa8.84□□□□□ -0.99
VPS36-206ENST00000497149 SLC4A9Q96Q91 983 aa8.84□□□□□ -0.99
VPS36-206ENST00000497149 HINFPQ9BQA5 517 aa8.84□□□□□ -0.99
VPS36-206ENST00000497149 RAB6BQ9NRW1 208 aa8.84□□□□□ -0.99
VPS36-206ENST00000497149 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
VPS36-206ENST00000497149 SERTAD1Q9UHV2 236 aa8.84□□□□□ -0.99
VPS36-206ENST00000497149 ST8SIA5O15466 376 aa8.83□□□□□ -1
VPS36-206ENST00000497149 BRD1O95696 1058 aa8.83□□□□□ -1
VPS36-206ENST00000497149 IL2RAP01589 272 aa8.83□□□□□ -1
VPS36-206ENST00000497149 RELBQ01201 579 aa8.83□□□□□ -1
VPS36-206ENST00000497149 KCTD17Q8N5Z5 321 aa8.83□□□□□ -1
VPS36-206ENST00000497149 MEIOBQ8N635 442 aa8.83□□□□□ -1
VPS36-206ENST00000497149 AXIN1O15169 862 aa8.82□□□□□ -1
VPS36-206ENST00000497149 CLN3Q13286 438 aa8.82□□□□□ -1
VPS36-206ENST00000497149 CNKSR1Q969H4 720 aa8.82□□□□□ -1
VPS36-206ENST00000497149 ESYT1Q9BSJ8 1104 aa8.82□□□□□ -1
VPS36-206ENST00000497149 LGR5O75473 907 aa8.81□□□□□ -1
VPS36-206ENST00000497149 SSFA2P28290 1259 aa8.81□□□□□ -1
VPS36-206ENST00000497149 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
VPS36-206ENST00000497149 TNS4Q8IZW8 715 aa8.81□□□□□ -1
VPS36-206ENST00000497149 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
VPS36-206ENST00000497149 ZNF395Q9H8N7 513 aaPredicted RBP8.81□□□□□ -1
VPS36-206ENST00000497149 HRH3Q9Y5N1 445 aa8.81□□□□□ -1
VPS36-206ENST00000497149 PRMT3O60678 531 aa8.8□□□□□ -1
VPS36-206ENST00000497149 SMTNP53814 917 aa8.8□□□□□ -1
VPS36-206ENST00000497149 EPHA4P54764 986 aa8.8□□□□□ -1
VPS36-206ENST00000497149 PHLDB3Q6NSJ2 640 aa8.8□□□□□ -1
VPS36-206ENST00000497149 PRIMPOLQ96LW4 560 aa8.8□□□□□ -1
VPS36-206ENST00000497149 A6NJY4 79 aa8.79□□□□□ -1
VPS36-206ENST00000497149 POTECB2RU33 542 aa8.79□□□□□ -1
VPS36-206ENST00000497149 MEN1O00255 615 aa8.79□□□□□ -1
VPS36-206ENST00000497149 ATP2B4P23634 1241 aa8.79□□□□□ -1
VPS36-206ENST00000497149 WEE1P30291 646 aa8.79□□□□□ -1
VPS36-206ENST00000497149 CENPCQ03188 943 aa8.79□□□□□ -1
VPS36-206ENST00000497149 TRIM26Q12899 539 aaPredicted RBP8.79□□□□□ -1
VPS36-206ENST00000497149 OCLNQ16625 522 aa8.79□□□□□ -1
VPS36-206ENST00000497149 B4GALNT3Q6L9W6 998 aa8.79□□□□□ -1
VPS36-206ENST00000497149 NLRP3Q96P20 1036 aa8.79□□□□□ -1
VPS36-206ENST00000497149 MTFR1Q15390 333 aa8.78□□□□□ -1
VPS36-206ENST00000497149 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
VPS36-206ENST00000497149 UPP2O95045 317 aa8.77□□□□□ -1.01
VPS36-206ENST00000497149 FOXK2Q01167 660 aa8.77□□□□□ -1.01
VPS36-206ENST00000497149 TLR1Q15399 786 aa8.77□□□□□ -1.01
VPS36-206ENST00000497149 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
VPS36-206ENST00000497149 CXXC1Q9P0U4 656 aaPredicted RBP8.77□□□□□ -1.01
VPS36-206ENST00000497149 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
VPS36-206ENST00000497149 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
VPS36-206ENST00000497149 SPINT1O43278 529 aa8.76□□□□□ -1.01
VPS36-206ENST00000497149 KCNA1Q09470 495 aa8.76□□□□□ -1.01
VPS36-206ENST00000497149 C1orf216Q8TAB5 229 aa8.76□□□□□ -1.01
VPS36-206ENST00000497149 SCG3Q8WXD2 468 aaKnown RBP8.76□□□□□ -1.01
VPS36-206ENST00000497149 INSM2Q96T92 566 aaPredicted RBP8.76□□□□□ -1.01
VPS36-206ENST00000497149 FHDC1Q9C0D6 1143 aaPredicted RBP8.76□□□□□ -1.01
VPS36-206ENST00000497149 TSPAN10Q9H1Z9 355 aaPredicted RBP8.76□□□□□ -1.01
VPS36-206ENST00000497149 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
VPS36-206ENST00000497149 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
VPS36-206ENST00000497149 C21orf2O43822 256 aa8.75□□□□□ -1.01
VPS36-206ENST00000497149 IGFBP4P22692 258 aa8.75□□□□□ -1.01
VPS36-206ENST00000497149 MRPL14Q6P1L8 145 aaKnown RBP8.75□□□□□ -1.01
VPS36-206ENST00000497149 GAS2L2Q8NHY3 880 aa8.75□□□□□ -1.01
VPS36-206ENST00000497149 BMP2P12643 396 aa8.74□□□□□ -1.01
VPS36-206ENST00000497149 GPC1P35052 558 aa8.74□□□□□ -1.01
VPS36-206ENST00000497149 RNF144AP50876 292 aaPredicted RBP8.74□□□□□ -1.01
VPS36-206ENST00000497149 TBCELQ5QJ74 424 aa8.74□□□□□ -1.01
VPS36-206ENST00000497149 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
VPS36-206ENST00000497149 TAS1R3Q7RTX0 852 aa8.74□□□□□ -1.01
VPS36-206ENST00000497149 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
VPS36-206ENST00000497149 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
VPS36-206ENST00000497149 IQSEC3Q9UPP2 1182 aaPredicted RBP8.74□□□□□ -1.01
VPS36-206ENST00000497149 ARID4AP29374 1257 aaPredicted RBP8.73□□□□□ -1.01
VPS36-206ENST00000497149 CTSOP43234 321 aaPredicted RBP8.73□□□□□ -1.01
VPS36-206ENST00000497149 C6orf118Q5T5N4 469 aa8.73□□□□□ -1.01
VPS36-206ENST00000497149 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
VPS36-206ENST00000497149 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
VPS36-206ENST00000497149 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
VPS36-206ENST00000497149 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
VPS36-206ENST00000497149 DACH1Q9UI36 760 aa8.73□□□□□ -1.01
VPS36-206ENST00000497149 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
VPS36-206ENST00000497149 BMP1P13497 986 aa8.72□□□□□ -1.01
VPS36-206ENST00000497149 SCNN1AP37088 669 aa8.72□□□□□ -1.01
VPS36-206ENST00000497149 FKBP5Q13451 457 aaPredicted RBP8.72□□□□□ -1.01
VPS36-206ENST00000497149 SCARF1Q14162 830 aa8.72□□□□□ -1.01
VPS36-206ENST00000497149 TRIM46Q7Z4K8 759 aa8.72□□□□□ -1.01
VPS36-206ENST00000497149 PURBQ96QR8 312 aaKnown RBP8.72□□□□□ -1.01
VPS36-206ENST00000497149 POLMQ9NP87 494 aaPredicted RBP8.72□□□□□ -1.01
VPS36-206ENST00000497149 ATP13A2Q9NQ11 1180 aa8.72□□□□□ -1.01
VPS36-206ENST00000497149 GMPR2Q9P2T1 348 aaKnown RBP8.72□□□□□ -1.01
VPS36-206ENST00000497149 C11orf95C9JLR9 678 aaPredicted RBP8.71□□□□□ -1.02
VPS36-206ENST00000497149 FOXO3O43524 673 aa8.71□□□□□ -1.02
VPS36-206ENST00000497149 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
VPS36-206ENST00000497149 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
VPS36-206ENST00000497149 FOXD4L5Q5VV16 416 aaPredicted RBP8.71□□□□□ -1.02
VPS36-206ENST00000497149 TMEM214Q6NUQ4 689 aaKnown RBP8.71□□□□□ -1.02
VPS36-206ENST00000497149 TXNDC2Q86VQ3 553 aa8.71□□□□□ -1.02
VPS36-206ENST00000497149 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.02
VPS36-206ENST00000497149 CHMP7Q8WUX9 453 aaPredicted RBP8.71□□□□□ -1.02
VPS36-206ENST00000497149 KIFC2Q96AC6 838 aa8.71□□□□□ -1.02
VPS36-206ENST00000497149 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
VPS36-206ENST00000497149 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms