RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 GPAMQ9HCL2 828 aa8.52□□□□□ -1.05
CLK1-214ENST00000496205 MAP2K3P46734 347 aa8.51□□□□□ -1.05
CLK1-214ENST00000496205 GALNT6Q8NCL4 622 aa8.51□□□□□ -1.05
CLK1-214ENST00000496205 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
CLK1-214ENST00000496205 COL8A1P27658 744 aa8.5□□□□□ -1.05
CLK1-214ENST00000496205 ESYT1Q9BSJ8 1104 aa8.5□□□□□ -1.05
CLK1-214ENST00000496205 HRH3Q9Y5N1 445 aa8.5□□□□□ -1.05
CLK1-214ENST00000496205 GNRH1P01148 92 aa8.49□□□□□ -1.05
CLK1-214ENST00000496205 MCCD1P59942 119 aaPredicted RBP8.49□□□□□ -1.05
CLK1-214ENST00000496205 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
CLK1-214ENST00000496205 HOXB4P17483 251 aaPredicted RBP8.48□□□□□ -1.05
CLK1-214ENST00000496205 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
CLK1-214ENST00000496205 C2CD2LO14523 706 aa8.47□□□□□ -1.05
CLK1-214ENST00000496205 BAG6P46379 1132 aa8.47□□□□□ -1.05
CLK1-214ENST00000496205 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
CLK1-214ENST00000496205 XAGE2Q96GT9 111 aa8.47□□□□□ -1.05
CLK1-214ENST00000496205 CCDC85AQ96PX6 553 aaPredicted RBP8.47□□□□□ -1.05
CLK1-214ENST00000496205 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
CLK1-214ENST00000496205 FHDC1Q9C0D6 1143 aaPredicted RBP8.47□□□□□ -1.05
CLK1-214ENST00000496205 ESF1Q9H501 851 aaKnown RBP8.47□□□□□ -1.05
CLK1-214ENST00000496205 RUBCNLQ9H714 662 aa8.47□□□□□ -1.05
CLK1-214ENST00000496205 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
CLK1-214ENST00000496205 A0A1B0GTH6 734 aa8.46□□□□□ -1.06
CLK1-214ENST00000496205 C4orf17Q53FE4 359 aa8.46□□□□□ -1.06
CLK1-214ENST00000496205 LINC00114Q6XXX2 140 aa8.46□□□□□ -1.06
CLK1-214ENST00000496205 SUV39H2Q9H5I1 410 aa8.46□□□□□ -1.06
CLK1-214ENST00000496205 RRAGCQ9HB90 399 aa8.46□□□□□ -1.06
CLK1-214ENST00000496205 MSX1P28360 303 aa8.45□□□□□ -1.06
CLK1-214ENST00000496205 IL27Q8NEV9 243 aa8.45□□□□□ -1.06
CLK1-214ENST00000496205 PHF24Q9UPV7 400 aa8.45□□□□□ -1.06
CLK1-214ENST00000496205 STAU1O95793 577 aaKnown RBP8.44□□□□□ -1.06
CLK1-214ENST00000496205 FURINP09958 794 aa8.44□□□□□ -1.06
CLK1-214ENST00000496205 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
CLK1-214ENST00000496205 MTMR14Q8NCE2 650 aa8.44□□□□□ -1.06
CLK1-214ENST00000496205 CEP126Q9P2H0 1117 aa8.44□□□□□ -1.06
CLK1-214ENST00000496205 GDF2Q9UK05 429 aaPredicted RBP8.44□□□□□ -1.06
CLK1-214ENST00000496205 CTBSQ01459 385 aa8.43□□□□□ -1.06
CLK1-214ENST00000496205 ABHD17AQ96GS6 310 aa8.43□□□□□ -1.06
CLK1-214ENST00000496205 NDFIP2Q9NV92 336 aa8.43□□□□□ -1.06
CLK1-214ENST00000496205 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
CLK1-214ENST00000496205 BNIP3LO60238 219 aa8.42□□□□□ -1.06
CLK1-214ENST00000496205 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
CLK1-214ENST00000496205 GOLGA6L1Q8N7Z2 621 aa8.42□□□□□ -1.06
CLK1-214ENST00000496205 GGA1Q9UJY5 639 aa8.42□□□□□ -1.06
CLK1-214ENST00000496205 BMP4P12644 408 aa8.41□□□□□ -1.06
CLK1-214ENST00000496205 LBRQ14739 615 aaKnown RBP8.41□□□□□ -1.06
CLK1-214ENST00000496205 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
CLK1-214ENST00000496205 GNASQ5JWF2 1037 aa8.41□□□□□ -1.06
CLK1-214ENST00000496205 ZNF592Q92610 1267 aa8.41□□□□□ -1.06
CLK1-214ENST00000496205 SNRKQ9NRH2 765 aa8.41□□□□□ -1.06
CLK1-214ENST00000496205 ATXN7L1Q9ULK2 861 aaPredicted RBP8.41□□□□□ -1.06
CLK1-214ENST00000496205 MYCP01106 439 aaPredicted RBP8.4□□□□□ -1.06
CLK1-214ENST00000496205 CSB-PGBD3P0DP91 1061 aa8.4□□□□□ -1.06
CLK1-214ENST00000496205 FGFR3P22607 806 aa8.4□□□□□ -1.06
CLK1-214ENST00000496205 ALYREFQ86V81 257 aaKnown RBP8.4□□□□□ -1.06
CLK1-214ENST00000496205 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
CLK1-214ENST00000496205 BANK1Q8NDB2 785 aa8.4□□□□□ -1.06
CLK1-214ENST00000496205 NDUFB9Q9Y6M9 179 aa8.4□□□□□ -1.06
CLK1-214ENST00000496205 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
CLK1-214ENST00000496205 SLCO4C1Q6ZQN7 724 aa8.39□□□□□ -1.07
CLK1-214ENST00000496205 PPARGC1BQ86YN6 1023 aaKnown RBP8.39□□□□□ -1.07
CLK1-214ENST00000496205 Q8N3U1 123 aa8.39□□□□□ -1.07
CLK1-214ENST00000496205 BTBD6Q96KE9 485 aa8.39□□□□□ -1.07
CLK1-214ENST00000496205 ETNK1Q9HBU6 452 aa8.39□□□□□ -1.07
CLK1-214ENST00000496205 HCN2Q9UL51 889 aa8.39□□□□□ -1.07
CLK1-214ENST00000496205 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
CLK1-214ENST00000496205 AMPD1P23109 780 aa8.38□□□□□ -1.07
CLK1-214ENST00000496205 PHTF2Q8N3S3 785 aa8.38□□□□□ -1.07
CLK1-214ENST00000496205 SOCS7O14512 581 aa8.37□□□□□ -1.07
CLK1-214ENST00000496205 EPXP11678 715 aa8.37□□□□□ -1.07
CLK1-214ENST00000496205 GTF2E1P29083 439 aaPredicted RBP8.37□□□□□ -1.07
CLK1-214ENST00000496205 ESCO1Q5FWF5 840 aa8.37□□□□□ -1.07
CLK1-214ENST00000496205 CD163Q86VB7 1156 aa8.37□□□□□ -1.07
CLK1-214ENST00000496205 RHBDD1Q8TEB9 315 aa8.37□□□□□ -1.07
CLK1-214ENST00000496205 CRISPLD1Q9H336 500 aa8.37□□□□□ -1.07
CLK1-214ENST00000496205 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
CLK1-214ENST00000496205 NEUROD2Q15784 382 aa8.36□□□□□ -1.07
CLK1-214ENST00000496205 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
CLK1-214ENST00000496205 ZCCHC2Q9C0B9 1178 aaKnown RBP8.36□□□□□ -1.07
CLK1-214ENST00000496205 NEURL1BA8MQ27 555 aa8.35□□□□□ -1.07
CLK1-214ENST00000496205 GNB5O14775 395 aa8.35□□□□□ -1.07
CLK1-214ENST00000496205 ITGB7P26010 798 aa8.35□□□□□ -1.07
CLK1-214ENST00000496205 CHRNA4P43681 627 aa8.35□□□□□ -1.07
CLK1-214ENST00000496205 TLR1Q15399 786 aa8.35□□□□□ -1.07
CLK1-214ENST00000496205 RNF135Q8IUD6 432 aa8.35□□□□□ -1.07
CLK1-214ENST00000496205 KLF15Q9UIH9 416 aa8.35□□□□□ -1.07
CLK1-214ENST00000496205 ARAFP10398 606 aa8.34□□□□□ -1.07
CLK1-214ENST00000496205 PLA2G4AP47712 749 aa8.34□□□□□ -1.07
CLK1-214ENST00000496205 DGKGP49619 791 aa8.34□□□□□ -1.07
CLK1-214ENST00000496205 ATP4AP20648 1035 aa8.33□□□□□ -1.08
CLK1-214ENST00000496205 USP4Q13107 963 aa8.33□□□□□ -1.08
CLK1-214ENST00000496205 DOLKQ9UPQ8 538 aa8.33□□□□□ -1.08
CLK1-214ENST00000496205 PCDHGC4Q9Y5F7 938 aa8.33□□□□□ -1.08
CLK1-214ENST00000496205 SCNN1DP51172 638 aa8.32□□□□□ -1.08
CLK1-214ENST00000496205 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
CLK1-214ENST00000496205 TBC1D9Q6ZT07 1266 aa8.31□□□□□ -1.08
CLK1-214ENST00000496205 CHSY3Q70JA7 882 aa8.31□□□□□ -1.08
CLK1-214ENST00000496205 TBC1D2BQ9UPU7 963 aa8.31□□□□□ -1.08
CLK1-214ENST00000496205 IRF5Q13568 498 aa8.3□□□□□ -1.08
CLK1-214ENST00000496205 FIGNL1Q6PIW4 674 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms