RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TLR1Q15399 786 aa8.8□□□□□ -1
ITGB1-216ENST00000493758 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
ITGB1-216ENST00000493758 SLC35F4A4IF30 521 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 H3BM21 787 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 BACH1O14867 736 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 STAU1O95793 577 aaKnown RBP8.79□□□□□ -1
ITGB1-216ENST00000493758 VSIG8P0DPA2 414 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 SMTNP53814 917 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 PTSQ03393 145 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 PTK7Q13308 1070 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 SLC27A3Q5K4L6 730 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 NBPF15Q8N660 670 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 ZNF358Q9NW07 568 aa8.79□□□□□ -1
ITGB1-216ENST00000493758 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
ITGB1-216ENST00000493758 USP17L15C9J2P7 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L10C9JJH3 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L13C9JLJ4 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L12C9JPN9 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L11C9JVI0 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L21D6R901 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L18D6R9N7 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L22D6RA61 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L17D6RBQ6 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L19D6RCP7 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L20D6RJB6 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 TERTO14746 1132 aaKnown RBP8.78□□□□□ -1
ITGB1-216ENST00000493758 PSME1Q06323 249 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 USP17L24Q0WX57 530 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
ITGB1-216ENST00000493758 CRTC2Q53ET0 693 aaPredicted RBP8.78□□□□□ -1
ITGB1-216ENST00000493758 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
ITGB1-216ENST00000493758 CCDC102BQ68D86 513 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
ITGB1-216ENST00000493758 RHBDD1Q8TEB9 315 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 ZSCAN10Q96SZ4 725 aaPredicted RBP8.78□□□□□ -1
ITGB1-216ENST00000493758 VRTNQ9H8Y1 702 aa8.78□□□□□ -1
ITGB1-216ENST00000493758 A6NJY4 79 aa8.77□□□□□ -1.01
ITGB1-216ENST00000493758 ARID3CA6NKF2 412 aa8.77□□□□□ -1.01
ITGB1-216ENST00000493758 FIGNL2A6NMB9 653 aa8.77□□□□□ -1.01
ITGB1-216ENST00000493758 RASA1P20936 1047 aa8.77□□□□□ -1.01
ITGB1-216ENST00000493758 FOXK2Q01167 660 aa8.77□□□□□ -1.01
ITGB1-216ENST00000493758 ELOAQ14241 798 aaKnown RBP8.77□□□□□ -1.01
ITGB1-216ENST00000493758 TAS1R3Q7RTX0 852 aa8.77□□□□□ -1.01
ITGB1-216ENST00000493758 ZNF775Q96BV0 537 aaPredicted RBP8.77□□□□□ -1.01
ITGB1-216ENST00000493758 DYRK1BQ9Y463 629 aa8.77□□□□□ -1.01
ITGB1-216ENST00000493758 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
ITGB1-216ENST00000493758 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
ITGB1-216ENST00000493758 POTEAQ6S8J7 498 aa8.76□□□□□ -1.01
ITGB1-216ENST00000493758 CCDC82Q8N4S0 544 aa8.76□□□□□ -1.01
ITGB1-216ENST00000493758 PBXIP1Q96AQ6 731 aa8.76□□□□□ -1.01
ITGB1-216ENST00000493758 ARXQ96QS3 562 aa8.76□□□□□ -1.01
ITGB1-216ENST00000493758 SCHIP1Q9P0W5 487 aaPredicted RBP8.76□□□□□ -1.01
ITGB1-216ENST00000493758 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
ITGB1-216ENST00000493758 PRICKLE2Q7Z3G6 844 aa8.75□□□□□ -1.01
ITGB1-216ENST00000493758 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
ITGB1-216ENST00000493758 NANOS1Q8WY41 292 aaKnown RBP8.75□□□□□ -1.01
ITGB1-216ENST00000493758 A0A1B0GTH6 734 aa8.74□□□□□ -1.01
ITGB1-216ENST00000493758 PPFIA3O75145 1194 aa8.74□□□□□ -1.01
ITGB1-216ENST00000493758 GTF2E1P29083 439 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-216ENST00000493758 SEC13P55735 322 aa8.74□□□□□ -1.01
ITGB1-216ENST00000493758 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
ITGB1-216ENST00000493758 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
ITGB1-216ENST00000493758 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-216ENST00000493758 ATG7O95352 703 aa8.73□□□□□ -1.01
ITGB1-216ENST00000493758 ITGA6P23229 1130 aa8.73□□□□□ -1.01
ITGB1-216ENST00000493758 C4orf17Q53FE4 359 aa8.73□□□□□ -1.01
ITGB1-216ENST00000493758 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
ITGB1-216ENST00000493758 ANKMY2Q8IV38 441 aa8.73□□□□□ -1.01
ITGB1-216ENST00000493758 HIRAP54198 1017 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-216ENST00000493758 POU4F2Q12837 409 aa8.72□□□□□ -1.01
ITGB1-216ENST00000493758 TMEM214Q6NUQ4 689 aaKnown RBP8.72□□□□□ -1.01
ITGB1-216ENST00000493758 C1orf216Q8TAB5 229 aa8.72□□□□□ -1.01
ITGB1-216ENST00000493758 NIFKQ9BYG3 293 aaKnown RBP8.72□□□□□ -1.01
ITGB1-216ENST00000493758 SERTAD1Q9UHV2 236 aa8.72□□□□□ -1.01
ITGB1-216ENST00000493758 RBM19Q9Y4C8 960 aaKnown RBP8.72□□□□□ -1.01
ITGB1-216ENST00000493758 PPP1R15AO75807 674 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-216ENST00000493758 DPYDQ12882 1025 aa8.71□□□□□ -1.02
ITGB1-216ENST00000493758 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.02
ITGB1-216ENST00000493758 SLC16A10Q8TF71 515 aa8.71□□□□□ -1.02
ITGB1-216ENST00000493758 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-216ENST00000493758 WFS1O76024 890 aa8.7□□□□□ -1.02
ITGB1-216ENST00000493758 RHOQP17081 205 aa8.7□□□□□ -1.02
ITGB1-216ENST00000493758 LBRQ14739 615 aaKnown RBP8.7□□□□□ -1.02
ITGB1-216ENST00000493758 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
ITGB1-216ENST00000493758 IRF7Q92985 503 aa8.7□□□□□ -1.02
ITGB1-216ENST00000493758 TIMMDC1Q9NPL8 285 aa8.7□□□□□ -1.02
ITGB1-216ENST00000493758 ZDHHC3Q9NYG2 299 aa8.7□□□□□ -1.02
ITGB1-216ENST00000493758 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
ITGB1-216ENST00000493758 SFI1A8K8P3 1242 aa8.69□□□□□ -1.02
ITGB1-216ENST00000493758 TEAD4Q15561 434 aa8.69□□□□□ -1.02
ITGB1-216ENST00000493758 SWI5Q1ZZU3 235 aa8.69□□□□□ -1.02
ITGB1-216ENST00000493758 SLC9A9Q8IVB4 645 aa8.69□□□□□ -1.02
ITGB1-216ENST00000493758 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
ITGB1-216ENST00000493758 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
ITGB1-216ENST00000493758 F11P03951 625 aa8.68□□□□□ -1.02
ITGB1-216ENST00000493758 ATP4AP20648 1035 aa8.68□□□□□ -1.02
ITGB1-216ENST00000493758 PSMA6P60900 246 aaKnown RBP8.68□□□□□ -1.02
ITGB1-216ENST00000493758 TRIM22Q8IYM9 498 aa8.68□□□□□ -1.02
ITGB1-216ENST00000493758 TNS4Q8IZW8 715 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms