RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ATP10DQ9P241 1426 aa21.85■■□□□ 1.09
PLOD3-216ENST00000489927 PANK3Q9H999 370 aa21.84■■□□□ 1.09
PLOD3-216ENST00000489927 WWC3Q9ULE0 1092 aa21.84■■□□□ 1.09
PLOD3-216ENST00000489927 KDRP35968 1356 aa21.83■■□□□ 1.08
PLOD3-216ENST00000489927 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
PLOD3-216ENST00000489927 EIF4G2P78344 907 aaKnown RBP eCLIP21.82■■□□□ 1.08
PLOD3-216ENST00000489927 ERVV-2B6SEH9 535 aa21.81■■□□□ 1.08
PLOD3-216ENST00000489927 SLC4A9Q96Q91 983 aa21.81■■□□□ 1.08
PLOD3-216ENST00000489927 ADCY9O60503 1353 aa21.8■■□□□ 1.08
PLOD3-216ENST00000489927 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
PLOD3-216ENST00000489927 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
PLOD3-216ENST00000489927 MMP10P09238 476 aa21.79■■□□□ 1.08
PLOD3-216ENST00000489927 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
PLOD3-216ENST00000489927 RBM42Q9BTD8 480 aaKnown RBP21.79■■□□□ 1.08
PLOD3-216ENST00000489927 CEP350Q5VT06 3117 aa21.79■■□□□ 1.08
PLOD3-216ENST00000489927 KDM6AO15550 1401 aaPredicted RBP21.79■■□□□ 1.08
PLOD3-216ENST00000489927 TRAPPC3LQ5T215 181 aa21.78■■□□□ 1.08
PLOD3-216ENST00000489927 GPBP1L1Q9HC44 474 aaPredicted RBP21.78■■□□□ 1.08
PLOD3-216ENST00000489927 RTCBQ9Y3I0 505 aaKnown RBP21.78■■□□□ 1.08
PLOD3-216ENST00000489927 ZNF530Q6P9A1 599 aaPredicted RBP21.77■■□□□ 1.08
PLOD3-216ENST00000489927 AEBP1Q8IUX7 1158 aa21.77■■□□□ 1.08
PLOD3-216ENST00000489927 ZNF831Q5JPB2 1677 aa21.76■■□□□ 1.07
PLOD3-216ENST00000489927 AMOTQ4VCS5 1084 aa21.76■■□□□ 1.07
PLOD3-216ENST00000489927 MORC1Q86VD1 984 aa21.76■■□□□ 1.07
PLOD3-216ENST00000489927 CABP4P57796 275 aa21.75■■□□□ 1.07
PLOD3-216ENST00000489927 ZNF526Q8TF50 670 aaPredicted RBP21.75■■□□□ 1.07
PLOD3-216ENST00000489927 CICQ96RK0 1608 aaPredicted RBP21.74■■□□□ 1.07
PLOD3-216ENST00000489927 RC3H1Q5TC82 1133 aaKnown RBP21.74■■□□□ 1.07
PLOD3-216ENST00000489927 NLGN1Q8N2Q7 840 aa21.74■■□□□ 1.07
PLOD3-216ENST00000489927 ARHGEF1Q92888 912 aaKnown RBP21.74■■□□□ 1.07
PLOD3-216ENST00000489927 COL5A3P25940 1745 aaPredicted RBP21.74■■□□□ 1.07
PLOD3-216ENST00000489927 CNTNAP4Q9C0A0 1308 aa21.74■■□□□ 1.07
PLOD3-216ENST00000489927 PXDNLA1KZ92 1463 aa21.73■■□□□ 1.07
PLOD3-216ENST00000489927 ADRA2BP18089 450 aa21.73■■□□□ 1.07
PLOD3-216ENST00000489927 MTHFSP49914 203 aa21.73■■□□□ 1.07
PLOD3-216ENST00000489927 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
PLOD3-216ENST00000489927 GYS1P13807 737 aa21.71■■□□□ 1.07
PLOD3-216ENST00000489927 C1orf141Q5JVX7 400 aa21.71■■□□□ 1.07
PLOD3-216ENST00000489927 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
PLOD3-216ENST00000489927 KIAA1551Q9HCM1 1747 aa21.71■■□□□ 1.07
PLOD3-216ENST00000489927 KIF13BQ9NQT8 1826 aa21.71■■□□□ 1.07
PLOD3-216ENST00000489927 C10orf71Q711Q0 1435 aa21.71■■□□□ 1.07
PLOD3-216ENST00000489927 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.06
PLOD3-216ENST00000489927 RFC4P35249 363 aa21.7■■□□□ 1.06
PLOD3-216ENST00000489927 TGFB2P61812 414 aa21.7■■□□□ 1.06
PLOD3-216ENST00000489927 NFATC2IPQ8NCF5 419 aa21.7■■□□□ 1.06
PLOD3-216ENST00000489927 KNSTRNQ9Y448 316 aa21.69■■□□□ 1.06
PLOD3-216ENST00000489927 A0A0G2JLW4 131 aa21.68■■□□□ 1.06
PLOD3-216ENST00000489927 IL13P35225 146 aa21.68■■□□□ 1.06
PLOD3-216ENST00000489927 C4AP0C0L4 1744 aa21.68■■□□□ 1.06
PLOD3-216ENST00000489927 N4BP2Q86UW6 1770 aaPredicted RBP21.68■■□□□ 1.06
PLOD3-216ENST00000489927 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
PLOD3-216ENST00000489927 BCS1LQ9Y276 419 aa21.67■■□□□ 1.06
PLOD3-216ENST00000489927 MYH14Q7Z406 1995 aaKnown RBP21.67■■□□□ 1.06
PLOD3-216ENST00000489927 CRKLP46109 303 aaKnown RBP21.66■■□□□ 1.06
PLOD3-216ENST00000489927 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
PLOD3-216ENST00000489927 PARP3Q9Y6F1 533 aa21.66■■□□□ 1.06
PLOD3-216ENST00000489927 DPEP1P16444 411 aa21.65■■□□□ 1.06
PLOD3-216ENST00000489927 AMER1Q5JTC6 1135 aaPredicted RBP21.64■■□□□ 1.05
PLOD3-216ENST00000489927 TJP1Q07157 1748 aa21.63■■□□□ 1.05
PLOD3-216ENST00000489927 HSPA6P17066 643 aa21.63■■□□□ 1.05
PLOD3-216ENST00000489927 SRP68Q9UHB9 627 aaKnown RBP21.63■■□□□ 1.05
PLOD3-216ENST00000489927 KIF3CO14782 793 aa21.62■■□□□ 1.05
PLOD3-216ENST00000489927 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
PLOD3-216ENST00000489927 USP42Q9H9J4 1324 aaKnown RBP21.61■■□□□ 1.05
PLOD3-216ENST00000489927 FCHSD2O94868 740 aa21.61■■□□□ 1.05
PLOD3-216ENST00000489927 FKBP8Q14318 412 aa21.61■■□□□ 1.05
PLOD3-216ENST00000489927 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
PLOD3-216ENST00000489927 ARHGAP27Q6ZUM4 889 aa21.61■■□□□ 1.05
PLOD3-216ENST00000489927 KCNA3P22001 575 aa21.6■■□□□ 1.05
PLOD3-216ENST00000489927 INTS5Q6P9B9 1019 aaKnown RBP21.6■■□□□ 1.05
PLOD3-216ENST00000489927 LGR6Q9HBX8 967 aa21.6■■□□□ 1.05
PLOD3-216ENST00000489927 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
PLOD3-216ENST00000489927 DDR1Q08345 913 aa21.59■■□□□ 1.05
PLOD3-216ENST00000489927 SLC52A2Q9HAB3 445 aa21.59■■□□□ 1.05
PLOD3-216ENST00000489927 BRCA1P38398 1863 aaKnown RBP21.58■■□□□ 1.05
PLOD3-216ENST00000489927 HMOX1P09601 288 aa21.58■■□□□ 1.05
PLOD3-216ENST00000489927 DNAJC10Q8IXB1 793 aa21.58■■□□□ 1.05
PLOD3-216ENST00000489927 ADAMTS7Q9UKP4 1686 aa21.56■■□□□ 1.04
PLOD3-216ENST00000489927 PIM2Q9P1W9 311 aa21.56■■□□□ 1.04
PLOD3-216ENST00000489927 MRC1P22897 1456 aa21.56■■□□□ 1.04
PLOD3-216ENST00000489927 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
PLOD3-216ENST00000489927 SLC39A6Q13433 755 aa21.55■■□□□ 1.04
PLOD3-216ENST00000489927 POLRMTO00411 1230 aaKnown RBP21.54■■□□□ 1.04
PLOD3-216ENST00000489927 MTHFSDQ2M296 383 aaKnown RBP21.54■■□□□ 1.04
PLOD3-216ENST00000489927 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
PLOD3-216ENST00000489927 PER1O15534 1290 aaPredicted RBP21.53■■□□□ 1.04
PLOD3-216ENST00000489927 ZPR1O75312 459 aa21.53■■□□□ 1.04
PLOD3-216ENST00000489927 CYP19A1P11511 503 aaPredicted RBP21.53■■□□□ 1.04
PLOD3-216ENST00000489927 TM4SF1P30408 202 aa21.53■■□□□ 1.04
PLOD3-216ENST00000489927 DALRD3Q5D0E6 543 aaKnown RBP21.53■■□□□ 1.04
PLOD3-216ENST00000489927 USPL1Q5W0Q7 1092 aa21.53■■□□□ 1.04
PLOD3-216ENST00000489927 KCPQ6ZWJ8 1503 aa21.53■■□□□ 1.04
PLOD3-216ENST00000489927 DIAPH1O60610 1272 aaKnown RBP21.52■■□□□ 1.04
PLOD3-216ENST00000489927 CHRNA5P30532 468 aa21.52■■□□□ 1.04
PLOD3-216ENST00000489927 CC2D1BQ5T0F9 858 aaKnown RBP21.52■■□□□ 1.04
PLOD3-216ENST00000489927 C9orf131Q5VYM1 1079 aa21.52■■□□□ 1.04
PLOD3-216ENST00000489927 NMRK2Q9NPI5 230 aa21.52■■□□□ 1.04
PLOD3-216ENST00000489927 ARFGEF1Q9Y6D6 1849 aa21.52■■□□□ 1.04
PLOD3-216ENST00000489927 TOMM70O94826 608 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms