RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 SMTNP53814 917 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 SLC27A3Q5K4L6 730 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 CCDC102BQ68D86 513 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 PRICKLE2Q7Z3G6 844 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00888-204ENST00000487386 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 PSME1Q06323 249 aa8.48□□□□□ -1.05
LINC00888-204ENST00000487386 MTFR1Q15390 333 aa8.48□□□□□ -1.05
LINC00888-204ENST00000487386 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
LINC00888-204ENST00000487386 PPARGC1BQ86YN6 1023 aaKnown RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 CCDC97Q96F63 343 aaPredicted RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
LINC00888-204ENST00000487386 FAM196BA6NMK8 535 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 POU4F2Q12837 409 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 PTK7Q13308 1070 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 TLR1Q15399 786 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
LINC00888-204ENST00000487386 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
LINC00888-204ENST00000487386 ZNF295-AS1Q8N0V1 137 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 TPCN2Q8NHX9 752 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
LINC00888-204ENST00000487386 A6NJY4 79 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 H3BM21 787 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 M0R2N6 131 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 BACH1O14867 736 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 PPFIA3O75145 1194 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 RHOQP17081 205 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 RFX1P22670 979 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 EPHA4P54764 986 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 NFX1Q12986 1120 aaKnown RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 LARP1Q6PKG0 1096 aaKnown RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 CCDC82Q8N4S0 544 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 CCDC155Q8N6L0 562 aa8.46□□□□□ -1.06
LINC00888-204ENST00000487386 ZNF594Q96JF6 807 aaPredicted RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L15C9J2P7 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L10C9JJH3 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L13C9JLJ4 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L12C9JPN9 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L11C9JVI0 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L21D6R901 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L18D6R9N7 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L22D6RA61 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L17D6RBQ6 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L19D6RCP7 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L20D6RJB6 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 FOXK2Q01167 660 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 USP17L24Q0WX57 530 aa8.45□□□□□ -1.06
LINC00888-204ENST00000487386 TMEM214Q6NUQ4 689 aaKnown RBP8.44□□□□□ -1.06
LINC00888-204ENST00000487386 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
LINC00888-204ENST00000487386 ARXQ96QS3 562 aa8.44□□□□□ -1.06
LINC00888-204ENST00000487386 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
LINC00888-204ENST00000487386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.43□□□□□ -1.06
LINC00888-204ENST00000487386 SFI1A8K8P3 1242 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 VEGFBP49765 207 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 C4orf17Q53FE4 359 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 CDCA8Q53HL2 280 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 GNASQ5JWF2 1037 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 ANKMY2Q8IV38 441 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 RHBDD1Q8TEB9 315 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 USP3Q9Y6I4 520 aa8.43□□□□□ -1.06
LINC00888-204ENST00000487386 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
LINC00888-204ENST00000487386 SEC13P55735 322 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 DPYDQ12882 1025 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 DYRK1BQ9Y463 629 aa8.42□□□□□ -1.06
LINC00888-204ENST00000487386 GTF2E1P29083 439 aaPredicted RBP8.41□□□□□ -1.06
LINC00888-204ENST00000487386 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
LINC00888-204ENST00000487386 PBXIP1Q96AQ6 731 aa8.41□□□□□ -1.06
LINC00888-204ENST00000487386 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
LINC00888-204ENST00000487386 WFS1O76024 890 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 ATG7O95352 703 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 ITGA6P23229 1130 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 PHKA2P46019 1235 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 TSEN2Q8NCE0 465 aaKnown RBP8.4□□□□□ -1.06
LINC00888-204ENST00000487386 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
LINC00888-204ENST00000487386 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
LINC00888-204ENST00000487386 NIFKQ9BYG3 293 aaKnown RBP8.4□□□□□ -1.06
LINC00888-204ENST00000487386 CUEDC1Q9NWM3 386 aaPredicted RBP8.39□□□□□ -1.07
LINC00888-204ENST00000487386 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
LINC00888-204ENST00000487386 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 POTEAQ6S8J7 498 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 FAM200AQ8TCP9 573 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
LINC00888-204ENST00000487386 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
LINC00888-204ENST00000487386 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 F11P03951 625 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 TEAD4Q15561 434 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 ZDHHC1Q8WTX9 485 aa8.37□□□□□ -1.07
LINC00888-204ENST00000487386 TSPAN10Q9H1Z9 355 aaPredicted RBP8.37□□□□□ -1.07
LINC00888-204ENST00000487386 C21orf2O43822 256 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms