RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
RTN4-214ENST00000486085 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
RTN4-214ENST00000486085 NLRP3Q96P20 1036 aa11.03□□□□□ -0.64
RTN4-214ENST00000486085 TSEN34Q9BSV6 310 aaKnown RBP11.03□□□□□ -0.64
RTN4-214ENST00000486085 SLAIN2Q9P270 581 aa11.03□□□□□ -0.64
RTN4-214ENST00000486085 PRMT3O60678 531 aa11.02□□□□□ -0.65
RTN4-214ENST00000486085 UPP2O95045 317 aa11.02□□□□□ -0.65
RTN4-214ENST00000486085 CLP1Q92989 425 aaKnown RBP11.02□□□□□ -0.65
RTN4-214ENST00000486085 PRIMPOLQ96LW4 560 aa11.02□□□□□ -0.65
RTN4-214ENST00000486085 ESYT1Q9BSJ8 1104 aa11.02□□□□□ -0.65
RTN4-214ENST00000486085 CLN3Q13286 438 aa11.01□□□□□ -0.65
RTN4-214ENST00000486085 LINC00528Q8N1L1 170 aa11.01□□□□□ -0.65
RTN4-214ENST00000486085 SLC4A9Q96Q91 983 aa11.01□□□□□ -0.65
RTN4-214ENST00000486085 SMTNP53814 917 aa11□□□□□ -0.65
RTN4-214ENST00000486085 LAPTM4AQ15012 233 aa11□□□□□ -0.65
RTN4-214ENST00000486085 C6orf118Q5T5N4 469 aa11□□□□□ -0.65
RTN4-214ENST00000486085 AEBP1Q8IUX7 1158 aa11□□□□□ -0.65
RTN4-214ENST00000486085 INSM2Q96T92 566 aaPredicted RBP11□□□□□ -0.65
RTN4-214ENST00000486085 AXIN1O15169 862 aa10.99□□□□□ -0.65
RTN4-214ENST00000486085 BMP2P12643 396 aa10.99□□□□□ -0.65
RTN4-214ENST00000486085 ATP2B4P23634 1241 aa10.99□□□□□ -0.65
RTN4-214ENST00000486085 CENPCQ03188 943 aa10.99□□□□□ -0.65
RTN4-214ENST00000486085 TLR1Q15399 786 aa10.99□□□□□ -0.65
RTN4-214ENST00000486085 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
RTN4-214ENST00000486085 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
RTN4-214ENST00000486085 A6NJY4 79 aa10.98□□□□□ -0.65
RTN4-214ENST00000486085 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
RTN4-214ENST00000486085 IRX2Q9BZI1 471 aaPredicted RBP10.98□□□□□ -0.65
RTN4-214ENST00000486085 HRH3Q9Y5N1 445 aa10.98□□□□□ -0.65
RTN4-214ENST00000486085 SPINT1O43278 529 aa10.97□□□□□ -0.65
RTN4-214ENST00000486085 BRD1O95696 1058 aa10.97□□□□□ -0.65
RTN4-214ENST00000486085 BMP1P13497 986 aa10.97□□□□□ -0.65
RTN4-214ENST00000486085 SMCPP49901 116 aaPredicted RBP10.97□□□□□ -0.65
RTN4-214ENST00000486085 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
RTN4-214ENST00000486085 POLMQ9NP87 494 aaPredicted RBP10.97□□□□□ -0.65
RTN4-214ENST00000486085 EPHA4P54764 986 aa10.96□□□□□ -0.65
RTN4-214ENST00000486085 SCG3Q8WXD2 468 aaKnown RBP10.96□□□□□ -0.65
RTN4-214ENST00000486085 PURBQ96QR8 312 aaKnown RBP10.96□□□□□ -0.65
RTN4-214ENST00000486085 TSPAN10Q9H1Z9 355 aaPredicted RBP10.96□□□□□ -0.65
RTN4-214ENST00000486085 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
RTN4-214ENST00000486085 SSFA2P28290 1259 aa10.95□□□□□ -0.66
RTN4-214ENST00000486085 CTSOP43234 321 aaPredicted RBP10.95□□□□□ -0.66
RTN4-214ENST00000486085 SCARF1Q14162 830 aa10.95□□□□□ -0.66
RTN4-214ENST00000486085 MTFR1Q15390 333 aa10.95□□□□□ -0.66
RTN4-214ENST00000486085 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
RTN4-214ENST00000486085 KCTD17Q8N5Z5 321 aa10.95□□□□□ -0.66
RTN4-214ENST00000486085 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
RTN4-214ENST00000486085 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
RTN4-214ENST00000486085 FHDC1Q9C0D6 1143 aaPredicted RBP10.95□□□□□ -0.66
RTN4-214ENST00000486085 SCHIP1Q9P0W5 487 aaPredicted RBP10.95□□□□□ -0.66
RTN4-214ENST00000486085 CDK2AP1O14519 115 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 ST8SIA5O15466 376 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 WEE1P30291 646 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 OCLNQ16625 522 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 SLC27A3Q5K4L6 730 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 PHLDB3Q6NSJ2 640 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 TRIM46Q7Z4K8 759 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 CXXC1Q9P0U4 656 aaPredicted RBP10.94□□□□□ -0.66
RTN4-214ENST00000486085 USP3Q9Y6I4 520 aa10.94□□□□□ -0.66
RTN4-214ENST00000486085 FOXK2Q01167 660 aa10.93□□□□□ -0.66
RTN4-214ENST00000486085 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
RTN4-214ENST00000486085 AAASQ9NRG9 546 aa10.93□□□□□ -0.66
RTN4-214ENST00000486085 PPP1R12BO60237 982 aaPredicted RBP10.92□□□□□ -0.66
RTN4-214ENST00000486085 IGFBP4P22692 258 aa10.92□□□□□ -0.66
RTN4-214ENST00000486085 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
RTN4-214ENST00000486085 GPC1P35052 558 aa10.92□□□□□ -0.66
RTN4-214ENST00000486085 SCNN1AP37088 669 aa10.92□□□□□ -0.66
RTN4-214ENST00000486085 RNF144AP50876 292 aaPredicted RBP10.92□□□□□ -0.66
RTN4-214ENST00000486085 CRIPAKQ8N1N5 446 aa10.92□□□□□ -0.66
RTN4-214ENST00000486085 GRIP2Q9C0E4 1043 aa10.92□□□□□ -0.66
RTN4-214ENST00000486085 C21orf2O43822 256 aa10.91□□□□□ -0.66
RTN4-214ENST00000486085 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
RTN4-214ENST00000486085 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
RTN4-214ENST00000486085 ZFP42Q96MM3 310 aa10.91□□□□□ -0.66
RTN4-214ENST00000486085 IQSEC3Q9UPP2 1182 aaPredicted RBP10.91□□□□□ -0.66
RTN4-214ENST00000486085 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
RTN4-214ENST00000486085 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.66
RTN4-214ENST00000486085 CABP1Q9NZU7 370 aa10.9□□□□□ -0.66
RTN4-214ENST00000486085 DACH1Q9UI36 760 aa10.9□□□□□ -0.66
RTN4-214ENST00000486085 FIGNL2A6NMB9 653 aa10.89□□□□□ -0.67
RTN4-214ENST00000486085 KCNA1Q09470 495 aa10.89□□□□□ -0.67
RTN4-214ENST00000486085 FKBP5Q13451 457 aaPredicted RBP10.89□□□□□ -0.67
RTN4-214ENST00000486085 ATP13A2Q9NQ11 1180 aa10.89□□□□□ -0.67
RTN4-214ENST00000486085 ZBTB7CA1YPR0 619 aa10.88□□□□□ -0.67
RTN4-214ENST00000486085 TTLL8A6PVC2 850 aa10.88□□□□□ -0.67
RTN4-214ENST00000486085 PRICKLE2Q7Z3G6 844 aa10.88□□□□□ -0.67
RTN4-214ENST00000486085 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
RTN4-214ENST00000486085 RNF217Q8TC41 542 aa10.88□□□□□ -0.67
RTN4-214ENST00000486085 PARP3Q9Y6F1 533 aa10.88□□□□□ -0.67
RTN4-214ENST00000486085 FOXO3O43524 673 aa10.87□□□□□ -0.67
RTN4-214ENST00000486085 PSMA6P60900 246 aaKnown RBP10.87□□□□□ -0.67
RTN4-214ENST00000486085 GNASQ5JWF2 1037 aa10.87□□□□□ -0.67
RTN4-214ENST00000486085 C1orf216Q8TAB5 229 aa10.87□□□□□ -0.67
RTN4-214ENST00000486085 RHBDD1Q8TEB9 315 aa10.87□□□□□ -0.67
RTN4-214ENST00000486085 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
RTN4-214ENST00000486085 NIFKQ9BYG3 293 aaKnown RBP10.87□□□□□ -0.67
RTN4-214ENST00000486085 CHMP3Q9Y3E7 222 aa10.87□□□□□ -0.67
RTN4-214ENST00000486085 SOS2Q07890 1332 aaPredicted RBP10.86□□□□□ -0.67
RTN4-214ENST00000486085 ARID4AP29374 1257 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms