RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 NANOS1Q8WY41 292 aaKnown RBP9.7□□□□□ -0.86
SMARCC1-207ENST00000485833 PSME1Q06323 249 aa9.69□□□□□ -0.86
SMARCC1-207ENST00000485833 GNASQ5JWF2 1037 aa9.69□□□□□ -0.86
SMARCC1-207ENST00000485833 TMEM214Q6NUQ4 689 aaKnown RBP9.69□□□□□ -0.86
SMARCC1-207ENST00000485833 TFIP11Q9UBB9 837 aaKnown RBP9.69□□□□□ -0.86
SMARCC1-207ENST00000485833 DYRK1BQ9Y463 629 aa9.69□□□□□ -0.86
SMARCC1-207ENST00000485833 CDC14CA4D256 554 aa9.68□□□□□ -0.86
SMARCC1-207ENST00000485833 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
SMARCC1-207ENST00000485833 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
SMARCC1-207ENST00000485833 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
SMARCC1-207ENST00000485833 TIMMDC1Q9NPL8 285 aa9.68□□□□□ -0.86
SMARCC1-207ENST00000485833 ZNF777Q9ULD5 760 aaPredicted RBP9.68□□□□□ -0.86
SMARCC1-207ENST00000485833 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
SMARCC1-207ENST00000485833 SMTNP53814 917 aa9.67□□□□□ -0.86
SMARCC1-207ENST00000485833 RHBDD1Q8TEB9 315 aa9.67□□□□□ -0.86
SMARCC1-207ENST00000485833 SLC4A9Q96Q91 983 aa9.67□□□□□ -0.86
SMARCC1-207ENST00000485833 PPP1R12CQ9BZL4 782 aa9.67□□□□□ -0.86
SMARCC1-207ENST00000485833 MKRN1Q9UHC7 482 aaKnown RBP9.67□□□□□ -0.86
SMARCC1-207ENST00000485833 SERTAD1Q9UHV2 236 aa9.67□□□□□ -0.86
SMARCC1-207ENST00000485833 C4orf17Q53FE4 359 aa9.66□□□□□ -0.86
SMARCC1-207ENST00000485833 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
SMARCC1-207ENST00000485833 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
SMARCC1-207ENST00000485833 CUEDC1Q9NWM3 386 aaPredicted RBP9.66□□□□□ -0.86
SMARCC1-207ENST00000485833 BACH1O14867 736 aa9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 PHKA2P46019 1235 aa9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 CLDN10P78369 228 aa9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 INSM1Q01101 510 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 MTFR1Q15390 333 aa9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 VWA5B2Q8N398 1253 aa9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 GPR161Q8N6U8 529 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 ZNF358Q9NW07 568 aa9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 KIAA1024Q9UPX6 916 aa9.65□□□□□ -0.86
SMARCC1-207ENST00000485833 A6NJY4 79 aa9.64□□□□□ -0.87
SMARCC1-207ENST00000485833 RIPOR1Q6ZS17 1223 aa9.64□□□□□ -0.87
SMARCC1-207ENST00000485833 TRIM22Q8IYM9 498 aa9.64□□□□□ -0.87
SMARCC1-207ENST00000485833 OGFOD1Q8N543 542 aa9.64□□□□□ -0.87
SMARCC1-207ENST00000485833 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
SMARCC1-207ENST00000485833 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
SMARCC1-207ENST00000485833 A0A1B0GTH6 734 aa9.63□□□□□ -0.87
SMARCC1-207ENST00000485833 ZBTB7BO15156 539 aaPredicted RBP9.63□□□□□ -0.87
SMARCC1-207ENST00000485833 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
SMARCC1-207ENST00000485833 TPCN2Q8NHX9 752 aa9.63□□□□□ -0.87
SMARCC1-207ENST00000485833 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
SMARCC1-207ENST00000485833 H7C1W4 665 aa9.62□□□□□ -0.87
SMARCC1-207ENST00000485833 F11P03951 625 aa9.62□□□□□ -0.87
SMARCC1-207ENST00000485833 CCDC102BQ68D86 513 aa9.62□□□□□ -0.87
SMARCC1-207ENST00000485833 IQSEC3Q9UPP2 1182 aaPredicted RBP9.62□□□□□ -0.87
SMARCC1-207ENST00000485833 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
SMARCC1-207ENST00000485833 PLA2G4AP47712 749 aa9.61□□□□□ -0.87
SMARCC1-207ENST00000485833 DBN1Q16643 649 aa9.61□□□□□ -0.87
SMARCC1-207ENST00000485833 SIX5Q8N196 739 aa9.61□□□□□ -0.87
SMARCC1-207ENST00000485833 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-207ENST00000485833 RASA1P20936 1047 aa9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 LMOD1P29536 600 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 KRT76Q01546 638 aa9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 ZNF594Q96JF6 807 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 COL25A1Q9BXS0 654 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 SCHIP1Q9P0W5 487 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
SMARCC1-207ENST00000485833 EPHA4P54764 986 aa9.59□□□□□ -0.87
SMARCC1-207ENST00000485833 CFAP70Q5T0N1 1121 aa9.59□□□□□ -0.87
SMARCC1-207ENST00000485833 GPAMQ9HCL2 828 aa9.59□□□□□ -0.87
SMARCC1-207ENST00000485833 MSX1P28360 303 aa9.58□□□□□ -0.88
SMARCC1-207ENST00000485833 RNFT1Q5M7Z0 435 aa9.58□□□□□ -0.88
SMARCC1-207ENST00000485833 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-207ENST00000485833 NUCKS1Q9H1E3 243 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-207ENST00000485833 RBM19Q9Y4C8 960 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-207ENST00000485833 M0R2N6 131 aa9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 DKK1O94907 266 aa9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 FOXK2Q01167 660 aa9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 FOXR1Q6PIV2 292 aa9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 CNTNAP3BQ96NU0 1288 aa9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 CNTNAP3Q9BZ76 1288 aa9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
SMARCC1-207ENST00000485833 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 LBRQ14739 615 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 CRTC2Q53ET0 693 aaPredicted RBP9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 TNS4Q8IZW8 715 aa9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 PGBD3Q8N328 593 aa9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 GTPBP3Q969Y2 492 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 CABP1Q9NZU7 370 aa9.56□□□□□ -0.88
SMARCC1-207ENST00000485833 FAM196BA6NMK8 535 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 SFI1A8K8P3 1242 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L15C9J2P7 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L13C9JLJ4 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L11C9JVI0 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L21D6R901 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L18D6R9N7 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L22D6RA61 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L17D6RBQ6 530 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms