RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SLC27A3Q5K4L6 730 aa6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 NUCKS1Q9H1E3 243 aaKnown RBP6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 WASLO00401 505 aaPredicted RBP6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 COL8A1P27658 744 aa6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 PODNQ7Z5L7 613 aa6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 NLRP3Q96P20 1036 aa6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 ARHGEF10LQ9HCE6 1279 aa6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 TIMMDC1Q9NPL8 285 aa6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 SNRKQ9NRH2 765 aa6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 RAB6BQ9NRW1 208 aa6.26□□□□□ -1.41
PRPF38B-205ENST00000485810 C2CD2LO14523 706 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 NR1H3Q13133 447 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 TAS1R3Q7RTX0 852 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 CYP2U1Q7Z449 544 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 CCDC125Q86Z20 511 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 TRIM52Q96A61 297 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 KLRG1Q96E93 195 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 TRERF1Q96PN7 1200 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 CDCA7Q9BWT1 371 aaPredicted RBP6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 CFHR5Q9BXR6 569 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 PCDHB11Q9Y5F2 797 aa6.25□□□□□ -1.41
PRPF38B-205ENST00000485810 MYO15BQ96JP2 1530 aa6.24□□□□□ -1.41
PRPF38B-205ENST00000485810 SUPT5HO00267 1087 aaKnown RBP6.24□□□□□ -1.41
PRPF38B-205ENST00000485810 CENPCQ03188 943 aa6.24□□□□□ -1.41
PRPF38B-205ENST00000485810 GALNT6Q8NCL4 622 aa6.24□□□□□ -1.41
PRPF38B-205ENST00000485810 OXCT2Q9BYC2 517 aaPredicted RBP6.24□□□□□ -1.41
PRPF38B-205ENST00000485810 FHDC1Q9C0D6 1143 aaPredicted RBP6.24□□□□□ -1.41
PRPF38B-205ENST00000485810 PHKA2P46019 1235 aa6.23□□□□□ -1.41
PRPF38B-205ENST00000485810 RNF20Q5VTR2 975 aa6.23□□□□□ -1.41
PRPF38B-205ENST00000485810 CNKSR1Q969H4 720 aa6.23□□□□□ -1.41
PRPF38B-205ENST00000485810 CCDC85AQ96PX6 553 aaPredicted RBP6.23□□□□□ -1.41
PRPF38B-205ENST00000485810 GPAMQ9HCL2 828 aa6.23□□□□□ -1.41
PRPF38B-205ENST00000485810 TRIM26Q12899 539 aaPredicted RBP6.22□□□□□ -1.41
PRPF38B-205ENST00000485810 TSGA10IPQ3SY00 556 aa6.22□□□□□ -1.41
PRPF38B-205ENST00000485810 LINC00114Q6XXX2 140 aa6.22□□□□□ -1.41
PRPF38B-205ENST00000485810 MTMR14Q8NCE2 650 aa6.22□□□□□ -1.41
PRPF38B-205ENST00000485810 XAGE2Q96GT9 111 aa6.22□□□□□ -1.41
PRPF38B-205ENST00000485810 ESYT1Q9BSJ8 1104 aa6.22□□□□□ -1.41
PRPF38B-205ENST00000485810 STAU1O95793 577 aaKnown RBP6.21□□□□□ -1.41
PRPF38B-205ENST00000485810 GNRH1P01148 92 aa6.21□□□□□ -1.41
PRPF38B-205ENST00000485810 BAG6P46379 1132 aa6.21□□□□□ -1.41
PRPF38B-205ENST00000485810 MAP2K3P46734 347 aa6.21□□□□□ -1.41
PRPF38B-205ENST00000485810 SUV39H2Q9H5I1 410 aa6.21□□□□□ -1.41
PRPF38B-205ENST00000485810 NDFIP2Q9NV92 336 aa6.21□□□□□ -1.41
PRPF38B-205ENST00000485810 HCN2Q9UL51 889 aa6.21□□□□□ -1.41
PRPF38B-205ENST00000485810 MCCD1P59942 119 aaPredicted RBP6.2□□□□□ -1.42
PRPF38B-205ENST00000485810 C4orf17Q53FE4 359 aa6.2□□□□□ -1.42
PRPF38B-205ENST00000485810 EDARADDQ8WWZ3 215 aa6.2□□□□□ -1.42
PRPF38B-205ENST00000485810 CEP126Q9P2H0 1117 aa6.2□□□□□ -1.42
PRPF38B-205ENST00000485810 NSFL1CQ9UNZ2 370 aaKnown RBP6.2□□□□□ -1.42
PRPF38B-205ENST00000485810 CTBSQ01459 385 aa6.19□□□□□ -1.42
PRPF38B-205ENST00000485810 RUBCNLQ9H714 662 aa6.19□□□□□ -1.42
PRPF38B-205ENST00000485810 A0A1B0GTH6 734 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 K7ELQ4 463 aaPredicted RBP6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 BNIP3LO60238 219 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 FURINP09958 794 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 MSX1P28360 303 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 BANK1Q8NDB2 785 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 ZSCAN10Q96SZ4 725 aaPredicted RBP6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 MKL2Q9ULH7 1088 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 ITGB7P26010 798 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 PHTF2Q8N3S3 785 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 ABHD17AQ96GS6 310 aa6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 DNAAF2Q9NVR5 837 aaKnown RBP6.18□□□□□ -1.42
PRPF38B-205ENST00000485810 ETNK1Q9HBU6 452 aa6.17□□□□□ -1.42
PRPF38B-205ENST00000485810 GDF2Q9UK05 429 aaPredicted RBP6.17□□□□□ -1.42
PRPF38B-205ENST00000485810 LBRQ14739 615 aaKnown RBP6.16□□□□□ -1.42
PRPF38B-205ENST00000485810 ALYREFQ86V81 257 aaKnown RBP6.16□□□□□ -1.42
PRPF38B-205ENST00000485810 BTBD6Q96KE9 485 aa6.16□□□□□ -1.42
PRPF38B-205ENST00000485810 KLF15Q9UIH9 416 aa6.16□□□□□ -1.42
PRPF38B-205ENST00000485810 GGA1Q9UJY5 639 aa6.16□□□□□ -1.42
PRPF38B-205ENST00000485810 TBC1D2BQ9UPU7 963 aa6.16□□□□□ -1.42
PRPF38B-205ENST00000485810 SOCS7O14512 581 aa6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 SLCO4C1Q6ZQN7 724 aa6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 PPARGC1BQ86YN6 1023 aaKnown RBP6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 Q8N3U1 123 aa6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 GOLGA6L1Q8N7Z2 621 aa6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 CRISPLD1Q9H336 500 aa6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 ATXN7L1Q9ULK2 861 aaPredicted RBP6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 PHF24Q9UPV7 400 aa6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 NDUFB9Q9Y6M9 179 aa6.15□□□□□ -1.43
PRPF38B-205ENST00000485810 C1QTNF9BB2RNN3 333 aa6.14□□□□□ -1.43
PRPF38B-205ENST00000485810 BMP4P12644 408 aa6.14□□□□□ -1.43
PRPF38B-205ENST00000485810 FGFR3P22607 806 aa6.14□□□□□ -1.43
PRPF38B-205ENST00000485810 TMEM214Q6NUQ4 689 aaKnown RBP6.14□□□□□ -1.43
PRPF38B-205ENST00000485810 CD163Q86VB7 1156 aa6.14□□□□□ -1.43
PRPF38B-205ENST00000485810 ZNF295-AS1Q8N0V1 137 aa6.14□□□□□ -1.43
PRPF38B-205ENST00000485810 RRAGCQ9HB90 399 aa6.14□□□□□ -1.43
PRPF38B-205ENST00000485810 ABCC9O60706 1549 aa6.13□□□□□ -1.43
PRPF38B-205ENST00000485810 EPXP11678 715 aa6.13□□□□□ -1.43
PRPF38B-205ENST00000485810 DGKGP49619 791 aa6.13□□□□□ -1.43
PRPF38B-205ENST00000485810 GRIN2CQ14957 1233 aa6.13□□□□□ -1.43
PRPF38B-205ENST00000485810 GNASQ5JWF2 1037 aa6.13□□□□□ -1.43
PRPF38B-205ENST00000485810 ZCCHC2Q9C0B9 1178 aaKnown RBP6.13□□□□□ -1.43
PRPF38B-205ENST00000485810 CHIC2Q9UKJ5 165 aa6.13□□□□□ -1.43
PRPF38B-205ENST00000485810 MYCP01106 439 aaPredicted RBP6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 UBTFP17480 764 aaKnown RBP6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 ATP4AP20648 1035 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms