RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 JAG1P78504 1218 aa8.16□□□□□ -1.1
COPA-204ENST00000481522 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
COPA-204ENST00000481522 ZBTB33Q86T24 672 aa8.16□□□□□ -1.1
COPA-204ENST00000481522 GAS2L1Q99501 681 aaPredicted RBP8.16□□□□□ -1.1
COPA-204ENST00000481522 GGA1Q9UJY5 639 aa8.16□□□□□ -1.1
COPA-204ENST00000481522 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
COPA-204ENST00000481522 FKBPLQ9UIM3 349 aa8.15□□□□□ -1.1
COPA-204ENST00000481522 C2CD2LO14523 706 aa8.14□□□□□ -1.11
COPA-204ENST00000481522 ADD1P35611 737 aaKnown RBP8.14□□□□□ -1.11
COPA-204ENST00000481522 FAM117AQ9C073 453 aa8.14□□□□□ -1.11
COPA-204ENST00000481522 H2AFB1P0C5Y9 115 aa8.13□□□□□ -1.11
COPA-204ENST00000481522 H2AFB2P0C5Z0 115 aa8.13□□□□□ -1.11
COPA-204ENST00000481522 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
COPA-204ENST00000481522 LILRA1O75019 489 aa8.12□□□□□ -1.11
COPA-204ENST00000481522 ELNP15502 786 aa8.11□□□□□ -1.11
COPA-204ENST00000481522 CLK2P49760 499 aaKnown RBP8.11□□□□□ -1.11
COPA-204ENST00000481522 CTDSPL2Q05D32 466 aa8.11□□□□□ -1.11
COPA-204ENST00000481522 ZNF784Q8NCA9 323 aaPredicted RBP8.11□□□□□ -1.11
COPA-204ENST00000481522 PLVAPQ9BX97 442 aa8.11□□□□□ -1.11
COPA-204ENST00000481522 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
COPA-204ENST00000481522 ATP1B4Q9UN42 357 aaPredicted RBP8.11□□□□□ -1.11
COPA-204ENST00000481522 UBAP2LQ14157 1087 aaKnown RBP8.1□□□□□ -1.11
COPA-204ENST00000481522 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
COPA-204ENST00000481522 CHSY3Q70JA7 882 aa8.1□□□□□ -1.11
COPA-204ENST00000481522 PTK2Q05397 1052 aa8.09□□□□□ -1.11
COPA-204ENST00000481522 SH3D19Q5HYK7 790 aa8.09□□□□□ -1.11
COPA-204ENST00000481522 RNF135Q8IUD6 432 aa8.09□□□□□ -1.11
COPA-204ENST00000481522 IL27Q8NEV9 243 aa8.08□□□□□ -1.12
COPA-204ENST00000481522 OCSTAMPQ9BR26 566 aa8.08□□□□□ -1.12
COPA-204ENST00000481522 POLR3EQ9NVU0 708 aa8.08□□□□□ -1.12
COPA-204ENST00000481522 GPSM3Q9Y4H4 160 aa8.08□□□□□ -1.12
COPA-204ENST00000481522 POU4F2Q12837 409 aa8.07□□□□□ -1.12
COPA-204ENST00000481522 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
COPA-204ENST00000481522 LRRN4Q8WUT4 740 aa8.07□□□□□ -1.12
COPA-204ENST00000481522 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
COPA-204ENST00000481522 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
COPA-204ENST00000481522 GPC1P35052 558 aa8.06□□□□□ -1.12
COPA-204ENST00000481522 RAB15P59190 212 aa8.06□□□□□ -1.12
COPA-204ENST00000481522 SKIV2LQ15477 1246 aaKnown RBP8.06□□□□□ -1.12
COPA-204ENST00000481522 PHF24Q9UPV7 400 aa8.06□□□□□ -1.12
COPA-204ENST00000481522 BMP4P12644 408 aa8.05□□□□□ -1.12
COPA-204ENST00000481522 NR6A1Q15406 480 aa8.05□□□□□ -1.12
COPA-204ENST00000481522 F11P03951 625 aa8.04□□□□□ -1.12
COPA-204ENST00000481522 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
COPA-204ENST00000481522 NBPF15Q8N660 670 aa8.03□□□□□ -1.12
COPA-204ENST00000481522 TRIM52Q96A61 297 aa8.03□□□□□ -1.12
COPA-204ENST00000481522 PCMTD1Q96MG8 357 aaPredicted RBP8.03□□□□□ -1.12
COPA-204ENST00000481522 TAL1P17542 331 aaPredicted RBP8.02□□□□□ -1.13
COPA-204ENST00000481522 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
COPA-204ENST00000481522 GOPCQ9HD26 462 aa8.02□□□□□ -1.13
COPA-204ENST00000481522 RNF112Q9ULX5 631 aa8.02□□□□□ -1.13
COPA-204ENST00000481522 ESPNB1AK53 854 aa8.01□□□□□ -1.13
COPA-204ENST00000481522 ARAFP10398 606 aa8.01□□□□□ -1.13
COPA-204ENST00000481522 IRAK1P51617 712 aa8.01□□□□□ -1.13
COPA-204ENST00000481522 PPP2R2DQ66LE6 453 aa8.01□□□□□ -1.13
COPA-204ENST00000481522 PNMA1Q8ND90 353 aa8.01□□□□□ -1.13
COPA-204ENST00000481522 NEURL1BA8MQ27 555 aa8□□□□□ -1.13
COPA-204ENST00000481522 APBA3O96018 575 aa8□□□□□ -1.13
COPA-204ENST00000481522 CTBSQ01459 385 aa8□□□□□ -1.13
COPA-204ENST00000481522 CCER1Q8TC90 406 aaPredicted RBP8□□□□□ -1.13
COPA-204ENST00000481522 CYLDQ9NQC7 956 aa8□□□□□ -1.13
COPA-204ENST00000481522 ATP5J2-PTCD1G3V325 749 aa7.99□□□□□ -1.13
COPA-204ENST00000481522 LCE5AQ5TCM9 118 aa7.99□□□□□ -1.13
COPA-204ENST00000481522 SEPT12Q8IYM1 358 aa7.99□□□□□ -1.13
COPA-204ENST00000481522 PROCA1Q8NCQ7 364 aaPredicted RBP7.99□□□□□ -1.13
COPA-204ENST00000481522 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
COPA-204ENST00000481522 SPATA31C2B4DYI2 1134 aa7.98□□□□□ -1.13
COPA-204ENST00000481522 MEN1O00255 615 aa7.98□□□□□ -1.13
COPA-204ENST00000481522 WDR44Q5JSH3 913 aa7.98□□□□□ -1.13
COPA-204ENST00000481522 ATXN7L1Q9ULK2 861 aaPredicted RBP7.98□□□□□ -1.13
COPA-204ENST00000481522 FGFR3P22607 806 aa7.97□□□□□ -1.13
COPA-204ENST00000481522 TIMMDC1Q9NPL8 285 aa7.97□□□□□ -1.13
COPA-204ENST00000481522 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
COPA-204ENST00000481522 GRIP2Q9C0E4 1043 aa7.96□□□□□ -1.14
COPA-204ENST00000481522 PRRT3Q5FWE3 981 aa7.95□□□□□ -1.14
COPA-204ENST00000481522 SLC27A3Q5K4L6 730 aa7.95□□□□□ -1.14
COPA-204ENST00000481522 ABHD17AQ96GS6 310 aa7.95□□□□□ -1.14
COPA-204ENST00000481522 KLF15Q9UIH9 416 aa7.95□□□□□ -1.14
COPA-204ENST00000481522 A0A1W2PRU2 124 aa7.94□□□□□ -1.14
COPA-204ENST00000481522 AP1G2O75843 785 aa7.94□□□□□ -1.14
COPA-204ENST00000481522 EPS8L1Q8TE68 723 aa7.94□□□□□ -1.14
COPA-204ENST00000481522 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
COPA-204ENST00000481522 FBXO31Q5XUX0 539 aaPredicted RBP7.93□□□□□ -1.14
COPA-204ENST00000481522 FCHSD1Q86WN1 690 aa7.93□□□□□ -1.14
COPA-204ENST00000481522 NLRP3Q96P20 1036 aa7.93□□□□□ -1.14
COPA-204ENST00000481522 GPAMQ9HCL2 828 aa7.93□□□□□ -1.14
COPA-204ENST00000481522 RFC5P40937 340 aa7.92□□□□□ -1.14
COPA-204ENST00000481522 LBRQ14739 615 aaKnown RBP7.92□□□□□ -1.14
COPA-204ENST00000481522 NACC1Q96RE7 527 aa7.92□□□□□ -1.14
COPA-204ENST00000481522 PCMTD2Q9NV79 361 aa7.92□□□□□ -1.14
COPA-204ENST00000481522 SPDYE3A6NKU9 549 aa7.91□□□□□ -1.14
COPA-204ENST00000481522 WASLO00401 505 aaPredicted RBP7.91□□□□□ -1.14
COPA-204ENST00000481522 BNIP3LO60238 219 aa7.91□□□□□ -1.14
COPA-204ENST00000481522 ADGRE1Q14246 886 aa7.9□□□□□ -1.14
COPA-204ENST00000481522 CCDC125Q86Z20 511 aa7.9□□□□□ -1.14
COPA-204ENST00000481522 HMX1Q9NP08 348 aaPredicted RBP7.9□□□□□ -1.14
COPA-204ENST00000481522 OAS3Q9Y6K5 1087 aaKnown RBP7.9□□□□□ -1.14
COPA-204ENST00000481522 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
COPA-204ENST00000481522 CLN3Q13286 438 aa7.89□□□□□ -1.15
COPA-204ENST00000481522 MBTPS1Q14703 1052 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms