RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.45
PRPF4B-206ENST00000481109 RBM5P52756 815 aaKnown RBP eCLIP12.27□□□□□ -0.45
PRPF4B-206ENST00000481109 ICA1Q05084 483 aa12.27□□□□□ -0.45
PRPF4B-206ENST00000481109 SH3GL3Q99963 347 aa12.27□□□□□ -0.45
PRPF4B-206ENST00000481109 KDM5CP41229 1560 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 KDM4AO75164 1064 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.452e-11■■□□□ 14
PRPF4B-206ENST00000481109 RWDD2BP57060 319 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 SCP2P22307 547 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 ST5P78524 1137 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 CCDC30Q5VVM6 783 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 NAIF1Q69YI7 327 aaPredicted RBP12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 TEX11Q8IYF3 940 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 SMC3Q9UQE7 1217 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
PRPF4B-206ENST00000481109 CAND2O75155 1236 aa12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 WWC2Q6AWC2 1192 aa12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 DNAJC14Q6Y2X3 702 aaPredicted RBP12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 CCDC26Q8TAB7 109 aa12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 RWDD1Q9H446 243 aaPredicted RBP12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 GNL3LQ9NVN8 582 aaKnown RBP12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 ZNF215Q9UL58 517 aaPredicted RBP12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 ZNF608Q9ULD9 1512 aaPredicted RBP12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 USP47Q96K76 1375 aa12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 CD151P48509 253 aa12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 GRIK3Q13003 919 aa12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 TTC19Q6DKK2 380 aaPredicted RBP12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 ARMCX6Q7L4S7 300 aa12.25□□□□□ -0.45
PRPF4B-206ENST00000481109 A0A087WUV0 522 aaPredicted RBP12.24□□□□□ -0.45
PRPF4B-206ENST00000481109 MAGEA8P43361 318 aa12.24□□□□□ -0.45
PRPF4B-206ENST00000481109 LEKR1Q6ZMV7 388 aa12.24□□□□□ -0.45
PRPF4B-206ENST00000481109 REXO1L1PQ8IX06 675 aa12.24□□□□□ -0.45
PRPF4B-206ENST00000481109 GIMAP7Q8NHV1 300 aa12.24□□□□□ -0.45
PRPF4B-206ENST00000481109 FAM107BQ9H098 131 aa12.24□□□□□ -0.45
PRPF4B-206ENST00000481109 KINO60870 393 aaKnown RBP12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 ELF2Q15723 593 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 IRAK4Q9NWZ3 460 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 SUPT6HQ7KZ85 1726 aaKnown RBP12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 ERC1Q8IUD2 1116 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 KDM4CQ9H3R0 1056 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 ELP1O95163 1332 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 UGGT2Q9NYU1 1516 aa12.23□□□□□ -0.45
PRPF4B-206ENST00000481109 TMCO5BA8MYB1 307 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 NEBLO76041 1014 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 SLU7O95391 586 aaKnown RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 SETSIPP0DME0 302 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 GCFC2P16383 781 aaKnown RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 ELF1P32519 619 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 TBC1D8BQ0IIM8 1120 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 NEDD9Q14511 834 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 CRYMQ14894 314 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 PDCD2Q16342 344 aaPredicted RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 MSL3Q8N5Y2 521 aaKnown RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 ERBB3P21860 1342 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 KDM6BO15054 1643 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 CCP110O43303 1012 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 PPFIA2O75334 1257 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 CCDC27Q2M243 656 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 CEP135Q66GS9 1140 aa12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 C16orf45Q96MC5 204 aaPredicted RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
PRPF4B-206ENST00000481109 CLCN6P51797 869 aa12.21□□□□□ -0.45
PRPF4B-206ENST00000481109 MNAT1P51948 309 aa12.21□□□□□ -0.45
PRPF4B-206ENST00000481109 TRIM6Q9C030 488 aaPredicted RBP12.21□□□□□ -0.45
PRPF4B-206ENST00000481109 CDK13Q14004 1512 aaKnown RBP12.21□□□□□ -0.45
PRPF4B-206ENST00000481109 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
PRPF4B-206ENST00000481109 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.46
PRPF4B-206ENST00000481109 TTLL5Q6EMB2 1281 aa12.21□□□□□ -0.46
PRPF4B-206ENST00000481109 CCDC171Q6TFL3 1326 aa12.21□□□□□ -0.46
PRPF4B-206ENST00000481109 GCC2Q8IWJ2 1684 aa12.21□□□□□ -0.46
PRPF4B-206ENST00000481109 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 MBD5Q9P267 1494 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 POLR3GO15318 223 aaPredicted RBP12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 MYBL2P10244 700 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 ABCD1P33897 745 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 SLC5A9Q2M3M2 681 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 GBP6Q6ZN66 633 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 ZNF483Q8TF39 744 aaPredicted RBP12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 TMX4Q9H1E5 349 aaPredicted RBP12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 CPSF2Q9P2I0 782 aaKnown RBP12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 KIF14Q15058 1648 aa12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 SPATS2LQ9NUQ6 558 aaKnown RBP12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 NSFL1CQ9UNZ2 370 aaKnown RBP12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
PRPF4B-206ENST00000481109 CHMLP26374 656 aa12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 EIF5P55010 431 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms