RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
EWSR1-216ENST00000479135 ATRIPQ8WXE1 791 aa12.75□□□□□ -0.37
EWSR1-216ENST00000479135 CETN2P41208 172 aa12.75□□□□□ -0.37
EWSR1-216ENST00000479135 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 SIRT1Q96EB6 747 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 C22orf23Q9BZE7 217 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 MRPL46Q9H2W6 279 aaKnown RBP12.74□□□□□ -0.37
EWSR1-216ENST00000479135 ABCC8Q09428 1581 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 SLU7O95391 586 aaKnown RBP12.74□□□□□ -0.37
EWSR1-216ENST00000479135 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
EWSR1-216ENST00000479135 RNF8O76064 485 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 TRIM55Q9BYV6 548 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 KIF5BP33176 963 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 CACNA2D4Q7Z3S7 1137 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 ZNF397Q8NF99 534 aaPredicted RBP12.74□□□□□ -0.37
EWSR1-216ENST00000479135 RABEP2Q9H5N1 569 aa12.74□□□□□ -0.37
EWSR1-216ENST00000479135 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
EWSR1-216ENST00000479135 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
EWSR1-216ENST00000479135 TDRD12Q587J7 1177 aaKnown RBP12.73□□□□□ -0.37
EWSR1-216ENST00000479135 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
EWSR1-216ENST00000479135 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
EWSR1-216ENST00000479135 TMEM110-MUSTN1A8MSY1 372 aa12.73□□□□□ -0.37
EWSR1-216ENST00000479135 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
EWSR1-216ENST00000479135 SLC9A5Q14940 896 aa12.73□□□□□ -0.37
EWSR1-216ENST00000479135 MRRFQ96E11 262 aaKnown RBP12.73□□□□□ -0.37
EWSR1-216ENST00000479135 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
EWSR1-216ENST00000479135 NOP2P46087 812 aaKnown RBP12.73□□□□□ -0.37
EWSR1-216ENST00000479135 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
EWSR1-216ENST00000479135 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
EWSR1-216ENST00000479135 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
EWSR1-216ENST00000479135 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 KIF5AQ12840 1032 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 STMN2Q93045 179 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 HSP90AA5PQ58FG0 334 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 MX2P20592 715 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 GEN1Q17RS7 908 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 CEP112Q8N8E3 955 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 C16orf45Q96MC5 204 aaPredicted RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 TPX2Q9ULW0 747 aaKnown RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 FRMD3A2A2Y4 597 aa12.72□□□□□ -0.37
EWSR1-216ENST00000479135 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 ZNF396Q96N95 335 aaPredicted RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
EWSR1-216ENST00000479135 INPP1P49441 399 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 PRC1O43663 620 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.37
EWSR1-216ENST00000479135 FOXD4Q12950 439 aaPredicted RBP12.71□□□□□ -0.37
EWSR1-216ENST00000479135 PTPN14Q15678 1187 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 RAD54L2Q9Y4B4 1467 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 KIF20AO95235 890 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 WDR63Q8IWG1 891 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 CBFA2T2O43439 604 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 CEP85LQ5SZL2 805 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 ISM2Q6H9L7 571 aa12.71□□□□□ -0.37
EWSR1-216ENST00000479135 PCK1P35558 622 aa12.71□□□□□ -0.38
EWSR1-216ENST00000479135 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.38
EWSR1-216ENST00000479135 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.38
EWSR1-216ENST00000479135 WWC3Q9ULE0 1092 aa12.71□□□□□ -0.38
EWSR1-216ENST00000479135 FAM180AQ6UWF9 173 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 ZSCAN29Q8IWY8 852 aaPredicted RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 CCDC89Q8N998 374 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 CLSTN2Q9H4D0 955 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 EIF3AQ14152 1382 aaKnown RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 CEP128Q6ZU80 1094 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 SETD5Q9C0A6 1442 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 MYO1BO43795 1136 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 HSF2BPO75031 334 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 NUP88Q99567 741 aaPredicted RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 DACH1Q9UI36 760 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 FBXO2Q9UK22 296 aaPredicted RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 ERC2O15083 957 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 RNF168Q8IYW5 571 aaPredicted RBP12.7□□□□□ -0.38
EWSR1-216ENST00000479135 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 ATP2B3Q16720 1220 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 CEP57L1Q8IYX8 460 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 MRFAP1L1Q96HT8 127 aa12.7□□□□□ -0.38
EWSR1-216ENST00000479135 ZEB2O60315 1214 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 NEK4P51957 841 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 CLNS1AP54105 237 aaKnown RBP12.69□□□□□ -0.38
EWSR1-216ENST00000479135 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 CCDC65Q8IXS2 484 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 FKBP5Q13451 457 aaPredicted RBP12.69□□□□□ -0.38
EWSR1-216ENST00000479135 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 MGEA5O60502 916 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 MAP3K7CLP57077 242 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
EWSR1-216ENST00000479135 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
EWSR1-216ENST00000479135 SYF2O95926 243 aaKnown RBP12.68□□□□□ -0.38
EWSR1-216ENST00000479135 PPFIBP2Q8ND30 876 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms