RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 VSIG8P0DPA2 414 aa8.66□□□□□ -1.02
AFF4-208ENST00000478588 ZBTB7BO15156 539 aaPredicted RBP8.65□□□□□ -1.02
AFF4-208ENST00000478588 TLR1Q15399 786 aa8.65□□□□□ -1.02
AFF4-208ENST00000478588 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
AFF4-208ENST00000478588 KIAA1024Q9UPX6 916 aa8.65□□□□□ -1.02
AFF4-208ENST00000478588 CDC14CA4D256 554 aa8.64□□□□□ -1.03
AFF4-208ENST00000478588 PALM3A6NDB9 673 aaPredicted RBP8.64□□□□□ -1.03
AFF4-208ENST00000478588 WASLO00401 505 aaPredicted RBP8.64□□□□□ -1.03
AFF4-208ENST00000478588 C4orf17Q53FE4 359 aa8.64□□□□□ -1.03
AFF4-208ENST00000478588 TMEM214Q6NUQ4 689 aaKnown RBP8.64□□□□□ -1.03
AFF4-208ENST00000478588 TAS1R3Q7RTX0 852 aa8.64□□□□□ -1.03
AFF4-208ENST00000478588 PLEKHM2Q8IWE5 1019 aa8.64□□□□□ -1.03
AFF4-208ENST00000478588 NANOS1Q8WY41 292 aaKnown RBP8.64□□□□□ -1.03
AFF4-208ENST00000478588 GAS2L1Q99501 681 aaPredicted RBP8.64□□□□□ -1.03
AFF4-208ENST00000478588 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
AFF4-208ENST00000478588 TIMMDC1Q9NPL8 285 aa8.64□□□□□ -1.03
AFF4-208ENST00000478588 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
AFF4-208ENST00000478588 SMTNP53814 917 aa8.63□□□□□ -1.03
AFF4-208ENST00000478588 CLDN10P78369 228 aa8.63□□□□□ -1.03
AFF4-208ENST00000478588 PSME1Q06323 249 aa8.63□□□□□ -1.03
AFF4-208ENST00000478588 PPP1R12CQ9BZL4 782 aa8.63□□□□□ -1.03
AFF4-208ENST00000478588 MAFBQ9Y5Q3 323 aaPredicted RBP8.63□□□□□ -1.03
AFF4-208ENST00000478588 USP3Q9Y6I4 520 aa8.63□□□□□ -1.03
AFF4-208ENST00000478588 KRT76Q01546 638 aa8.62□□□□□ -1.03
AFF4-208ENST00000478588 DBN1Q16643 649 aa8.62□□□□□ -1.03
AFF4-208ENST00000478588 RIPOR1Q6ZS17 1223 aa8.62□□□□□ -1.03
AFF4-208ENST00000478588 PPARGC1BQ86YN6 1023 aaKnown RBP8.62□□□□□ -1.03
AFF4-208ENST00000478588 DYRK1BQ9Y463 629 aa8.62□□□□□ -1.03
AFF4-208ENST00000478588 WDR44Q5JSH3 913 aa8.61□□□□□ -1.03
AFF4-208ENST00000478588 SV2AQ7L0J3 742 aa8.61□□□□□ -1.03
AFF4-208ENST00000478588 OGFOD1Q8N543 542 aa8.61□□□□□ -1.03
AFF4-208ENST00000478588 SLC4A9Q96Q91 983 aa8.61□□□□□ -1.03
AFF4-208ENST00000478588 ZNF358Q9NW07 568 aa8.61□□□□□ -1.03
AFF4-208ENST00000478588 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
AFF4-208ENST00000478588 LMOD1P29536 600 aaPredicted RBP8.6□□□□□ -1.03
AFF4-208ENST00000478588 GNASQ5JWF2 1037 aa8.6□□□□□ -1.03
AFF4-208ENST00000478588 RNFT1Q5M7Z0 435 aa8.6□□□□□ -1.03
AFF4-208ENST00000478588 CCDC102BQ68D86 513 aa8.6□□□□□ -1.03
AFF4-208ENST00000478588 TRIM50Q86XT4 487 aa8.6□□□□□ -1.03
AFF4-208ENST00000478588 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
AFF4-208ENST00000478588 RHBDD1Q8TEB9 315 aa8.6□□□□□ -1.03
AFF4-208ENST00000478588 COL25A1Q9BXS0 654 aaPredicted RBP8.6□□□□□ -1.03
AFF4-208ENST00000478588 GPAMQ9HCL2 828 aa8.6□□□□□ -1.03
AFF4-208ENST00000478588 A6NJY4 79 aa8.59□□□□□ -1.03
AFF4-208ENST00000478588 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
AFF4-208ENST00000478588 CNTNAP3BQ96NU0 1288 aa8.59□□□□□ -1.03
AFF4-208ENST00000478588 CNTNAP3Q9BZ76 1288 aa8.59□□□□□ -1.03
AFF4-208ENST00000478588 DNAAF2Q9NVR5 837 aaKnown RBP8.59□□□□□ -1.03
AFF4-208ENST00000478588 GPR25O00155 361 aa8.58□□□□□ -1.04
AFF4-208ENST00000478588 DKK1O94907 266 aa8.58□□□□□ -1.04
AFF4-208ENST00000478588 F11P03951 625 aa8.58□□□□□ -1.04
AFF4-208ENST00000478588 THBS1P07996 1170 aa8.58□□□□□ -1.04
AFF4-208ENST00000478588 MTFR1Q15390 333 aa8.58□□□□□ -1.04
AFF4-208ENST00000478588 KANK4Q5T7N3 995 aaPredicted RBP8.58□□□□□ -1.04
AFF4-208ENST00000478588 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
AFF4-208ENST00000478588 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
AFF4-208ENST00000478588 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
AFF4-208ENST00000478588 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
AFF4-208ENST00000478588 IQSEC3Q9UPP2 1182 aaPredicted RBP8.58□□□□□ -1.04
AFF4-208ENST00000478588 CDK2AP1O14519 115 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 RASA1P20936 1047 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 MSX1P28360 303 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 PLA2G4AP47712 749 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 TBCELQ5QJ74 424 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 CFAP70Q5T0N1 1121 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 ZNF295-AS1Q8N0V1 137 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
AFF4-208ENST00000478588 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
AFF4-208ENST00000478588 BACH1O14867 736 aa8.56□□□□□ -1.04
AFF4-208ENST00000478588 RFX1P22670 979 aa8.56□□□□□ -1.04
AFF4-208ENST00000478588 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
AFF4-208ENST00000478588 INSM1Q01101 510 aaPredicted RBP8.56□□□□□ -1.04
AFF4-208ENST00000478588 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
AFF4-208ENST00000478588 LARGE2Q8N3Y3 721 aa8.56□□□□□ -1.04
AFF4-208ENST00000478588 GTPBP3Q969Y2 492 aaKnown RBP8.56□□□□□ -1.04
AFF4-208ENST00000478588 RUBCNLQ9H714 662 aa8.56□□□□□ -1.04
AFF4-208ENST00000478588 A0A1B0GTH6 734 aa8.55□□□□□ -1.04
AFF4-208ENST00000478588 ARID3CA6NKF2 412 aa8.55□□□□□ -1.04
AFF4-208ENST00000478588 EPHA4P54764 986 aa8.55□□□□□ -1.04
AFF4-208ENST00000478588 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
AFF4-208ENST00000478588 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
AFF4-208ENST00000478588 NIFKQ9BYG3 293 aaKnown RBP8.55□□□□□ -1.04
AFF4-208ENST00000478588 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
AFF4-208ENST00000478588 SCHIP1Q9P0W5 487 aaPredicted RBP8.55□□□□□ -1.04
AFF4-208ENST00000478588 LGR5O75473 907 aa8.54□□□□□ -1.04
AFF4-208ENST00000478588 FOXK2Q01167 660 aa8.54□□□□□ -1.04
AFF4-208ENST00000478588 GAS6Q14393 721 aa8.54□□□□□ -1.04
AFF4-208ENST00000478588 H7C1W4 665 aa8.53□□□□□ -1.04
AFF4-208ENST00000478588 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
AFF4-208ENST00000478588 SIX5Q8N196 739 aa8.53□□□□□ -1.04
AFF4-208ENST00000478588 ZSCAN1Q8NBB4 408 aa8.53□□□□□ -1.04
AFF4-208ENST00000478588 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
AFF4-208ENST00000478588 ZDHHC1Q8WTX9 485 aa8.53□□□□□ -1.04
AFF4-208ENST00000478588 NUCKS1Q9H1E3 243 aaKnown RBP8.53□□□□□ -1.04
AFF4-208ENST00000478588 VRTNQ9H8Y1 702 aa8.53□□□□□ -1.04
AFF4-208ENST00000478588 PTK7Q13308 1070 aa8.52□□□□□ -1.05
AFF4-208ENST00000478588 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
AFF4-208ENST00000478588 GMCL1Q96IK5 515 aa8.52□□□□□ -1.05
AFF4-208ENST00000478588 ATP4AP20648 1035 aa8.51□□□□□ -1.05
AFF4-208ENST00000478588 TXLNAP40222 546 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms