RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 NANOS1Q8WY41 292 aaKnown RBP9.89□□□□□ -0.83
PRKD3-208ENST00000475912 CUEDC1Q9NWM3 386 aaPredicted RBP9.89□□□□□ -0.83
PRKD3-208ENST00000475912 TMEM214Q6NUQ4 689 aaKnown RBP9.88□□□□□ -0.83
PRKD3-208ENST00000475912 SERTAD1Q9UHV2 236 aa9.88□□□□□ -0.83
PRKD3-208ENST00000475912 TMEM229AB2RXF0 380 aa9.87□□□□□ -0.83
PRKD3-208ENST00000475912 PHKA2P46019 1235 aa9.87□□□□□ -0.83
PRKD3-208ENST00000475912 PSME1Q06323 249 aa9.87□□□□□ -0.83
PRKD3-208ENST00000475912 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
PRKD3-208ENST00000475912 CALR3Q96L12 384 aaKnown RBP9.87□□□□□ -0.83
PRKD3-208ENST00000475912 GAS2L1Q99501 681 aaPredicted RBP9.87□□□□□ -0.83
PRKD3-208ENST00000475912 TIMMDC1Q9NPL8 285 aa9.87□□□□□ -0.83
PRKD3-208ENST00000475912 DYRK1BQ9Y463 629 aa9.87□□□□□ -0.83
PRKD3-208ENST00000475912 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
PRKD3-208ENST00000475912 GNASQ5JWF2 1037 aa9.86□□□□□ -0.83
PRKD3-208ENST00000475912 RIPOR1Q6ZS17 1223 aa9.86□□□□□ -0.83
PRKD3-208ENST00000475912 SV2AQ7L0J3 742 aa9.86□□□□□ -0.83
PRKD3-208ENST00000475912 C4orf17Q53FE4 359 aa9.85□□□□□ -0.83
PRKD3-208ENST00000475912 WDR44Q5JSH3 913 aa9.85□□□□□ -0.83
PRKD3-208ENST00000475912 TFIP11Q9UBB9 837 aaKnown RBP9.85□□□□□ -0.83
PRKD3-208ENST00000475912 SMTNP53814 917 aa9.84□□□□□ -0.83
PRKD3-208ENST00000475912 KRT76Q01546 638 aa9.84□□□□□ -0.83
PRKD3-208ENST00000475912 PPARGC1BQ86YN6 1023 aaKnown RBP9.84□□□□□ -0.83
PRKD3-208ENST00000475912 ZNF777Q9ULD5 760 aaPredicted RBP9.84□□□□□ -0.83
PRKD3-208ENST00000475912 TRIM50Q86XT4 487 aa9.83□□□□□ -0.84
PRKD3-208ENST00000475912 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.83□□□□□ -0.84
PRKD3-208ENST00000475912 RHBDD1Q8TEB9 315 aa9.83□□□□□ -0.84
PRKD3-208ENST00000475912 ZNF837Q96EG3 531 aaPredicted RBP9.83□□□□□ -0.84
PRKD3-208ENST00000475912 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
PRKD3-208ENST00000475912 ZNF358Q9NW07 568 aa9.83□□□□□ -0.84
PRKD3-208ENST00000475912 GTF3C3Q9Y5Q9 886 aa9.83□□□□□ -0.84
PRKD3-208ENST00000475912 PALM3A6NDB9 673 aaPredicted RBP9.82□□□□□ -0.84
PRKD3-208ENST00000475912 CLDN10P78369 228 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 DBN1Q16643 649 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 RNFT1Q5M7Z0 435 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 TRIM22Q8IYM9 498 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 CNTNAP3BQ96NU0 1288 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 SLC4A9Q96Q91 983 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 CNTNAP3Q9BZ76 1288 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 GPAMQ9HCL2 828 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 MKRN1Q9UHC7 482 aaKnown RBP9.82□□□□□ -0.84
PRKD3-208ENST00000475912 KIAA1024Q9UPX6 916 aa9.82□□□□□ -0.84
PRKD3-208ENST00000475912 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
PRKD3-208ENST00000475912 FAM181BA6NEQ2 426 aa9.81□□□□□ -0.84
PRKD3-208ENST00000475912 F11P03951 625 aa9.81□□□□□ -0.84
PRKD3-208ENST00000475912 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
PRKD3-208ENST00000475912 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
PRKD3-208ENST00000475912 A6NJY4 79 aa9.8□□□□□ -0.84
PRKD3-208ENST00000475912 ZBTB7BO15156 539 aaPredicted RBP9.8□□□□□ -0.84
PRKD3-208ENST00000475912 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
PRKD3-208ENST00000475912 ATP1A2P50993 1020 aa9.8□□□□□ -0.84
PRKD3-208ENST00000475912 TPCN2Q8NHX9 752 aa9.8□□□□□ -0.84
PRKD3-208ENST00000475912 USP3Q9Y6I4 520 aa9.8□□□□□ -0.84
PRKD3-208ENST00000475912 A0A1B0GTH6 734 aa9.79□□□□□ -0.84
PRKD3-208ENST00000475912 MTFR1Q15390 333 aa9.79□□□□□ -0.84
PRKD3-208ENST00000475912 OGFOD1Q8N543 542 aa9.79□□□□□ -0.84
PRKD3-208ENST00000475912 ZSCAN1Q8NBB4 408 aa9.79□□□□□ -0.84
PRKD3-208ENST00000475912 DNAAF2Q9NVR5 837 aaKnown RBP9.79□□□□□ -0.84
PRKD3-208ENST00000475912 H7C1W4 665 aa9.78□□□□□ -0.84
PRKD3-208ENST00000475912 GPR25O00155 361 aa9.78□□□□□ -0.84
PRKD3-208ENST00000475912 BACH1O14867 736 aa9.78□□□□□ -0.84
PRKD3-208ENST00000475912 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
PRKD3-208ENST00000475912 GTPBP3Q969Y2 492 aaKnown RBP9.78□□□□□ -0.84
PRKD3-208ENST00000475912 GMCL1Q96IK5 515 aa9.78□□□□□ -0.84
PRKD3-208ENST00000475912 ZNF594Q96JF6 807 aaPredicted RBP9.78□□□□□ -0.84
PRKD3-208ENST00000475912 IQSEC3Q9UPP2 1182 aaPredicted RBP9.78□□□□□ -0.84
PRKD3-208ENST00000475912 CDK2AP1O14519 115 aa9.77□□□□□ -0.85
PRKD3-208ENST00000475912 MSX1P28360 303 aa9.77□□□□□ -0.85
PRKD3-208ENST00000475912 NIFKQ9BYG3 293 aaKnown RBP9.77□□□□□ -0.85
PRKD3-208ENST00000475912 NUCKS1Q9H1E3 243 aaKnown RBP9.77□□□□□ -0.85
PRKD3-208ENST00000475912 RUBCNLQ9H714 662 aa9.77□□□□□ -0.85
PRKD3-208ENST00000475912 LOC100996750A0A140TA64 210 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 THBS1P07996 1170 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 LMOD1P29536 600 aaPredicted RBP9.76□□□□□ -0.85
PRKD3-208ENST00000475912 GAS6Q14393 721 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 TNS4Q8IZW8 715 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 ZNF295-AS1Q8N0V1 137 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 LARGE2Q8N3Y3 721 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 KRTAP4-6Q9BYQ5 205 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 ZMYND15Q9H091 742 aa9.76□□□□□ -0.85
PRKD3-208ENST00000475912 RASA1P20936 1047 aa9.75□□□□□ -0.85
PRKD3-208ENST00000475912 EPHA4P54764 986 aa9.75□□□□□ -0.85
PRKD3-208ENST00000475912 AIDAQ96BJ3 306 aa9.75□□□□□ -0.85
PRKD3-208ENST00000475912 CABP1Q9NZU7 370 aa9.75□□□□□ -0.85
PRKD3-208ENST00000475912 SCHIP1Q9P0W5 487 aaPredicted RBP9.75□□□□□ -0.85
PRKD3-208ENST00000475912 CSB-PGBD3P0DP91 1061 aa9.74□□□□□ -0.85
PRKD3-208ENST00000475912 TBCELQ5QJ74 424 aa9.74□□□□□ -0.85
PRKD3-208ENST00000475912 FOXR1Q6PIV2 292 aa9.74□□□□□ -0.85
PRKD3-208ENST00000475912 SIX5Q8N196 739 aa9.74□□□□□ -0.85
PRKD3-208ENST00000475912 PGBD3Q8N328 593 aa9.74□□□□□ -0.85
PRKD3-208ENST00000475912 SFI1A8K8P3 1242 aa9.73□□□□□ -0.85
PRKD3-208ENST00000475912 DKK1O94907 266 aa9.73□□□□□ -0.85
PRKD3-208ENST00000475912 ATP4AP20648 1035 aa9.73□□□□□ -0.85
PRKD3-208ENST00000475912 FOXK2Q01167 660 aa9.73□□□□□ -0.85
PRKD3-208ENST00000475912 KANK4Q5T7N3 995 aaPredicted RBP9.73□□□□□ -0.85
PRKD3-208ENST00000475912 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
PRKD3-208ENST00000475912 PARP3Q9Y6F1 533 aa9.73□□□□□ -0.85
PRKD3-208ENST00000475912 CRTC2Q53ET0 693 aaPredicted RBP9.72□□□□□ -0.85
PRKD3-208ENST00000475912 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
PRKD3-208ENST00000475912 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
PRKD3-208ENST00000475912 NBPF1Q3BBV0 1214 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms