RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 INHAP05111 366 aa9.89□□□□□ -0.83
LTN1-204ENST00000475344 GTF2IP78347 998 aa9.89□□□□□ -0.83
LTN1-204ENST00000475344 FNBP4Q8N3X1 1017 aaPredicted RBP9.89□□□□□ -0.83
LTN1-204ENST00000475344 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
LTN1-204ENST00000475344 FHDC1Q9C0D6 1143 aaPredicted RBP9.89□□□□□ -0.83
LTN1-204ENST00000475344 GPAMQ9HCL2 828 aa9.89□□□□□ -0.83
LTN1-204ENST00000475344 KRT76Q01546 638 aa9.88□□□□□ -0.83
LTN1-204ENST00000475344 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
LTN1-204ENST00000475344 STK17AQ9UEE5 414 aa9.88□□□□□ -0.83
LTN1-204ENST00000475344 ZNF837Q96EG3 531 aaPredicted RBP9.87□□□□□ -0.83
LTN1-204ENST00000475344 PCDHGA11Q9Y5H2 935 aa9.87□□□□□ -0.83
LTN1-204ENST00000475344 USP17L3A6NCW0 530 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 USP17L4A6NCW7 530 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 GPR25O00155 361 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
LTN1-204ENST00000475344 DBN1Q16643 649 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 C4orf17Q53FE4 359 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 RNFT1Q5M7Z0 435 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 USP17L2Q6R6M4 530 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 USP17L1Q7RTZ2 530 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
LTN1-204ENST00000475344 CALR3Q96L12 384 aaKnown RBP9.86□□□□□ -0.83
LTN1-204ENST00000475344 A6NJR5 290 aa9.85□□□□□ -0.83
LTN1-204ENST00000475344 ATP9BO43861 1147 aa9.85□□□□□ -0.83
LTN1-204ENST00000475344 WDR44Q5JSH3 913 aa9.85□□□□□ -0.83
LTN1-204ENST00000475344 RHBDD1Q8TEB9 315 aa9.85□□□□□ -0.83
LTN1-204ENST00000475344 H7C1W4 665 aa9.84□□□□□ -0.83
LTN1-204ENST00000475344 F11P03951 625 aa9.84□□□□□ -0.83
LTN1-204ENST00000475344 PLA2G4AP47712 749 aa9.84□□□□□ -0.83
LTN1-204ENST00000475344 SMTNP53814 917 aa9.84□□□□□ -0.83
LTN1-204ENST00000475344 FOXR1Q6PIV2 292 aa9.84□□□□□ -0.83
LTN1-204ENST00000475344 PPARGC1BQ86YN6 1023 aaKnown RBP9.84□□□□□ -0.83
LTN1-204ENST00000475344 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
LTN1-204ENST00000475344 FAM181BA6NEQ2 426 aa9.83□□□□□ -0.84
LTN1-204ENST00000475344 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
LTN1-204ENST00000475344 GTPBP3Q969Y2 492 aaKnown RBP9.83□□□□□ -0.84
LTN1-204ENST00000475344 NUCKS1Q9H1E3 243 aaKnown RBP9.83□□□□□ -0.84
LTN1-204ENST00000475344 A0A1B0GTH6 734 aa9.82□□□□□ -0.84
LTN1-204ENST00000475344 TRIM50Q86XT4 487 aa9.82□□□□□ -0.84
LTN1-204ENST00000475344 AIDAQ96BJ3 306 aa9.82□□□□□ -0.84
LTN1-204ENST00000475344 RUBCNLQ9H714 662 aa9.82□□□□□ -0.84
LTN1-204ENST00000475344 TFIP11Q9UBB9 837 aaKnown RBP9.82□□□□□ -0.84
LTN1-204ENST00000475344 A6NJY4 79 aa9.81□□□□□ -0.84
LTN1-204ENST00000475344 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
LTN1-204ENST00000475344 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
LTN1-204ENST00000475344 PGBD3Q8N328 593 aa9.81□□□□□ -0.84
LTN1-204ENST00000475344 GMCL1Q96IK5 515 aa9.81□□□□□ -0.84
LTN1-204ENST00000475344 ZNF358Q9NW07 568 aa9.81□□□□□ -0.84
LTN1-204ENST00000475344 MKRN1Q9UHC7 482 aaKnown RBP9.81□□□□□ -0.84
LTN1-204ENST00000475344 BACH1O14867 736 aa9.8□□□□□ -0.84
LTN1-204ENST00000475344 MSX1P28360 303 aa9.8□□□□□ -0.84
LTN1-204ENST00000475344 ATP1A2P50993 1020 aa9.8□□□□□ -0.84
LTN1-204ENST00000475344 TPCN2Q8NHX9 752 aa9.8□□□□□ -0.84
LTN1-204ENST00000475344 TRERF1Q96PN7 1200 aa9.8□□□□□ -0.84
LTN1-204ENST00000475344 NIFKQ9BYG3 293 aaKnown RBP9.8□□□□□ -0.84
LTN1-204ENST00000475344 CABP1Q9NZU7 370 aa9.8□□□□□ -0.84
LTN1-204ENST00000475344 ZNF777Q9ULD5 760 aaPredicted RBP9.8□□□□□ -0.84
LTN1-204ENST00000475344 CLDN10P78369 228 aa9.79□□□□□ -0.84
LTN1-204ENST00000475344 GAS6Q14393 721 aa9.79□□□□□ -0.84
LTN1-204ENST00000475344 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
LTN1-204ENST00000475344 DNAAF2Q9NVR5 837 aaKnown RBP9.79□□□□□ -0.84
LTN1-204ENST00000475344 KIAA1024Q9UPX6 916 aa9.79□□□□□ -0.84
LTN1-204ENST00000475344 USP3Q9Y6I4 520 aa9.79□□□□□ -0.84
LTN1-204ENST00000475344 PALM3A6NDB9 673 aaPredicted RBP9.78□□□□□ -0.84
LTN1-204ENST00000475344 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
LTN1-204ENST00000475344 OGFOD1Q8N543 542 aa9.78□□□□□ -0.84
LTN1-204ENST00000475344 SLC4A9Q96Q91 983 aa9.78□□□□□ -0.84
LTN1-204ENST00000475344 TNS4Q8IZW8 715 aa9.77□□□□□ -0.85
LTN1-204ENST00000475344 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
LTN1-204ENST00000475344 MAFBQ9Y5Q3 323 aaPredicted RBP9.77□□□□□ -0.85
LTN1-204ENST00000475344 PARP3Q9Y6F1 533 aa9.77□□□□□ -0.85
LTN1-204ENST00000475344 CDK2AP1O14519 115 aa9.76□□□□□ -0.85
LTN1-204ENST00000475344 ZBTB7BO15156 539 aaPredicted RBP9.76□□□□□ -0.85
LTN1-204ENST00000475344 ADAMTS2O95450 1211 aa9.76□□□□□ -0.85
LTN1-204ENST00000475344 MTFR1Q15390 333 aa9.76□□□□□ -0.85
LTN1-204ENST00000475344 TBCELQ5QJ74 424 aa9.76□□□□□ -0.85
LTN1-204ENST00000475344 SVOPQ8N4V2 548 aa9.76□□□□□ -0.85
LTN1-204ENST00000475344 PPP1R12CQ9BZL4 782 aa9.76□□□□□ -0.85
LTN1-204ENST00000475344 RASA1P20936 1047 aa9.75□□□□□ -0.85
LTN1-204ENST00000475344 LMOD1P29536 600 aaPredicted RBP9.75□□□□□ -0.85
LTN1-204ENST00000475344 NBPF1Q3BBV0 1214 aa9.75□□□□□ -0.85
LTN1-204ENST00000475344 EFHC2Q5JST6 749 aa9.75□□□□□ -0.85
LTN1-204ENST00000475344 MBIPQ9NS73 344 aa9.75□□□□□ -0.85
LTN1-204ENST00000475344 IQSEC3Q9UPP2 1182 aaPredicted RBP9.75□□□□□ -0.85
LTN1-204ENST00000475344 THBS1P07996 1170 aa9.74□□□□□ -0.85
LTN1-204ENST00000475344 SRSF11Q05519 484 aaKnown RBP9.74□□□□□ -0.85
LTN1-204ENST00000475344 ARSJQ5FYB0 599 aaPredicted RBP9.74□□□□□ -0.85
LTN1-204ENST00000475344 WHAMMQ8TF30 809 aa9.74□□□□□ -0.85
LTN1-204ENST00000475344 MX2P20592 715 aa9.73□□□□□ -0.85
LTN1-204ENST00000475344 ZNF385CQ66K41 422 aaPredicted RBP9.73□□□□□ -0.85
LTN1-204ENST00000475344 LARGE2Q8N3Y3 721 aa9.73□□□□□ -0.85
LTN1-204ENST00000475344 SCHIP1Q9P0W5 487 aaPredicted RBP9.73□□□□□ -0.85
LTN1-204ENST00000475344 ZNF232Q9UNY5 417 aa9.73□□□□□ -0.85
LTN1-204ENST00000475344 SFI1A8K8P3 1242 aa9.72□□□□□ -0.85
LTN1-204ENST00000475344 TATP17735 454 aaPredicted RBP9.72□□□□□ -0.85
LTN1-204ENST00000475344 ATP4AP20648 1035 aa9.72□□□□□ -0.85
LTN1-204ENST00000475344 SLC9A9Q8IVB4 645 aa9.72□□□□□ -0.85
LTN1-204ENST00000475344 IGF1RP08069 1367 aa9.72□□□□□ -0.85
LTN1-204ENST00000475344 SLURP2P0DP57 97 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms